RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
PRDM5-203ENST00000428209 KDM2AQ9Y2K7 1162 aa24.13■■□□□ 1.45
PRDM5-203ENST00000428209 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
PRDM5-203ENST00000428209 ADGRL1O94910 1474 aa24.12■■□□□ 1.45
PRDM5-203ENST00000428209 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
PRDM5-203ENST00000428209 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
PRDM5-203ENST00000428209 SCAPERQ9BY12 1400 aa24.12■■□□□ 1.45
PRDM5-203ENST00000428209 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
PRDM5-203ENST00000428209 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
PRDM5-203ENST00000428209 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
PRDM5-203ENST00000428209 USP47Q96K76 1375 aa24.08■■□□□ 1.44
PRDM5-203ENST00000428209 ATP7AQ04656 1500 aa24.07■■□□□ 1.44
PRDM5-203ENST00000428209 RALGAPBQ86X10 1494 aa24.07■■□□□ 1.44
PRDM5-203ENST00000428209 CNTLNQ9NXG0 1405 aa24.06■■□□□ 1.44
PRDM5-203ENST00000428209 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
PRDM5-203ENST00000428209 KIF7Q2M1P5 1343 aa24.05■■□□□ 1.44
PRDM5-203ENST00000428209 RGL3Q3MIN7 710 aa24.05■■□□□ 1.44
PRDM5-203ENST00000428209 CARD11Q9BXL7 1154 aa24.04■■□□□ 1.44
PRDM5-203ENST00000428209 POLR1AO95602 1720 aaPredicted RBP24.02■■□□□ 1.44
PRDM5-203ENST00000428209 ATP10AO60312 1499 aa24.02■■□□□ 1.44
PRDM5-203ENST00000428209 CD109Q6YHK3 1445 aa24.02■■□□□ 1.44
PRDM5-203ENST00000428209 KDM5CP41229 1560 aa24.02■■□□□ 1.44
PRDM5-203ENST00000428209 KIF3BO15066 747 aa23.98■■□□□ 1.43
PRDM5-203ENST00000428209 DHX29Q7Z478 1369 aaKnown RBP23.97■■□□□ 1.43
PRDM5-203ENST00000428209 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
PRDM5-203ENST00000428209 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
PRDM5-203ENST00000428209 KANK1Q14678 1352 aa23.96■■□□□ 1.43
PRDM5-203ENST00000428209 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.43
PRDM5-203ENST00000428209 A2MP01023 1474 aa23.95■■□□□ 1.42
PRDM5-203ENST00000428209 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
PRDM5-203ENST00000428209 BCORL1Q5H9F3 1711 aa23.95■■□□□ 1.42
PRDM5-203ENST00000428209 E9PCH4 1651 aa23.94■■□□□ 1.42
PRDM5-203ENST00000428209 CFAP74Q9C0B2 1584 aa23.94■■□□□ 1.42
PRDM5-203ENST00000428209 KIDINS220Q9ULH0 1771 aa23.92■■□□□ 1.42
PRDM5-203ENST00000428209 POLR3GLQ9BT43 218 aa23.92■■□□□ 1.42
PRDM5-203ENST00000428209 ARID4BQ4LE39 1312 aaPredicted RBP23.92■■□□□ 1.42
PRDM5-203ENST00000428209 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
PRDM5-203ENST00000428209 ST20-MTHFSA0A0A6YYL1 179 aa23.9■■□□□ 1.42
PRDM5-203ENST00000428209 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
PRDM5-203ENST00000428209 PRKRIP1Q9H875 184 aaPredicted RBP23.89■■□□□ 1.41
PRDM5-203ENST00000428209 TET3O43151 1660 aa23.89■■□□□ 1.41
PRDM5-203ENST00000428209 VWDEQ8N2E2 1590 aa23.88■■□□□ 1.41
PRDM5-203ENST00000428209 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
PRDM5-203ENST00000428209 TRPM2O94759 1503 aa23.86■■□□□ 1.41
PRDM5-203ENST00000428209 PTPRTO14522 1441 aa23.86■■□□□ 1.41
PRDM5-203ENST00000428209 NBPF1Q3BBV0 1214 aa23.86■■□□□ 1.41
PRDM5-203ENST00000428209 PRDM15P57071 1507 aaPredicted RBP23.86■■□□□ 1.41
PRDM5-203ENST00000428209 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
PRDM5-203ENST00000428209 MROH1Q8NDA8 1641 aa23.83■■□□□ 1.41
PRDM5-203ENST00000428209 MLH3Q9UHC1 1453 aa23.82■■□□□ 1.4
PRDM5-203ENST00000428209 GPRASP1Q5JY77 1395 aa23.82■■□□□ 1.4
PRDM5-203ENST00000428209 NEO1Q92859 1461 aa23.81■■□□□ 1.4
PRDM5-203ENST00000428209 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
PRDM5-203ENST00000428209 HECW2Q9P2P5 1572 aa23.79■■□□□ 1.4
PRDM5-203ENST00000428209 CEP152O94986 1710 aa23.78■■□□□ 1.4
PRDM5-203ENST00000428209 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
PRDM5-203ENST00000428209 CCDC184Q52MB2 194 aa23.77■■□□□ 1.4
PRDM5-203ENST00000428209 LAMC1P11047 1609 aa23.76■■□□□ 1.39
PRDM5-203ENST00000428209 STAC3Q96MF2 364 aa23.74■■□□□ 1.39
PRDM5-203ENST00000428209 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
PRDM5-203ENST00000428209 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
PRDM5-203ENST00000428209 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
PRDM5-203ENST00000428209 GGT6Q6P531 493 aa23.73■■□□□ 1.39
PRDM5-203ENST00000428209 FRMPD1Q5SYB0 1578 aa23.73■■□□□ 1.39
PRDM5-203ENST00000428209 HNRNPUQ00839 825 aaKnown RBP eCLIP23.72■■□□□ 1.39
PRDM5-203ENST00000428209 MAP3K4Q9Y6R4 1608 aa23.72■■□□□ 1.39
PRDM5-203ENST00000428209 LMTK2Q8IWU2 1503 aa23.71■■□□□ 1.39
PRDM5-203ENST00000428209 CNGB1Q14028 1251 aaPredicted RBP23.71■■□□□ 1.39
PRDM5-203ENST00000428209 ABCA6Q8N139 1617 aa23.71■■□□□ 1.39
PRDM5-203ENST00000428209 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
PRDM5-203ENST00000428209 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
PRDM5-203ENST00000428209 GLI2P10070 1586 aa23.67■■□□□ 1.38
PRDM5-203ENST00000428209 UGGT1Q9NYU2 1555 aa23.67■■□□□ 1.38
PRDM5-203ENST00000428209 FAM9BQ8IZU0 186 aa23.67■■□□□ 1.38
PRDM5-203ENST00000428209 TESK2Q96S53 571 aa23.66■■□□□ 1.38
PRDM5-203ENST00000428209 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
PRDM5-203ENST00000428209 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
PRDM5-203ENST00000428209 SUPT16HQ9Y5B9 1047 aaKnown RBP23.65■■□□□ 1.38
PRDM5-203ENST00000428209 WASHC2CQ9Y4E1 1318 aa23.65■■□□□ 1.38
PRDM5-203ENST00000428209 RICTORQ6R327 1708 aa23.63■■□□□ 1.37
PRDM5-203ENST00000428209 KIF1BO60333 1816 aa23.63■■□□□ 1.37
PRDM5-203ENST00000428209 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
PRDM5-203ENST00000428209 TMF1P82094 1093 aa23.61■■□□□ 1.37
PRDM5-203ENST00000428209 DIP2CQ9Y2E4 1556 aa23.61■■□□□ 1.37
PRDM5-203ENST00000428209 NPATQ14207 1427 aa23.61■■□□□ 1.37
PRDM5-203ENST00000428209 DISP3Q9P2K9 1392 aa23.61■■□□□ 1.37
PRDM5-203ENST00000428209 DIP2BQ9P265 1576 aa23.59■■□□□ 1.37
PRDM5-203ENST00000428209 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
PRDM5-203ENST00000428209 ABCC3O15438 1527 aa23.58■■□□□ 1.37
PRDM5-203ENST00000428209 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
PRDM5-203ENST00000428209 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
PRDM5-203ENST00000428209 YEATS2Q9ULM3 1422 aa23.56■■□□□ 1.36
PRDM5-203ENST00000428209 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
PRDM5-203ENST00000428209 MYOM2P54296 1465 aa23.55■■□□□ 1.36
PRDM5-203ENST00000428209 ADGRF5Q8IZF2 1346 aa23.55■■□□□ 1.36
PRDM5-203ENST00000428209 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
PRDM5-203ENST00000428209 KTN1Q86UP2 1357 aaKnown RBP23.54■■□□□ 1.36
PRDM5-203ENST00000428209 KIAA1210Q9ULL0 1709 aa23.54■■□□□ 1.36
PRDM5-203ENST00000428209 RALBP1Q15311 655 aa23.54■■□□□ 1.36
PRDM5-203ENST00000428209 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms