RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 MLECQ14165 292 aa13.42□□□□□ -0.26
VSIG4-203ENST00000427538 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
VSIG4-203ENST00000427538 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
VSIG4-203ENST00000427538 ATP10AO60312 1499 aa13.42□□□□□ -0.26
VSIG4-203ENST00000427538 ITGAEP38570 1179 aa13.41□□□□□ -0.26
VSIG4-203ENST00000427538 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
VSIG4-203ENST00000427538 KDM5CP41229 1560 aa13.41□□□□□ -0.26
VSIG4-203ENST00000427538 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
VSIG4-203ENST00000427538 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
VSIG4-203ENST00000427538 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
VSIG4-203ENST00000427538 PTPN23Q9H3S7 1636 aa13.4□□□□□ -0.26
VSIG4-203ENST00000427538 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
VSIG4-203ENST00000427538 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
VSIG4-203ENST00000427538 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
VSIG4-203ENST00000427538 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
VSIG4-203ENST00000427538 ATP7AQ04656 1500 aa13.38□□□□□ -0.27
VSIG4-203ENST00000427538 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
VSIG4-203ENST00000427538 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
VSIG4-203ENST00000427538 DAPK1P53355 1430 aa13.36□□□□□ -0.27
VSIG4-203ENST00000427538 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
VSIG4-203ENST00000427538 GGT6Q6P531 493 aa13.35□□□□□ -0.27
VSIG4-203ENST00000427538 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
VSIG4-203ENST00000427538 ABCC5O15440 1437 aa13.34□□□□□ -0.27
VSIG4-203ENST00000427538 A2MP01023 1474 aa13.34□□□□□ -0.27
VSIG4-203ENST00000427538 DIP2CQ9Y2E4 1556 aa13.33□□□□□ -0.28
VSIG4-203ENST00000427538 KDM4FA0A1W2PPD8 638 aa13.33□□□□□ -0.28
VSIG4-203ENST00000427538 KIF3BO15066 747 aa13.33□□□□□ -0.28
VSIG4-203ENST00000427538 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
VSIG4-203ENST00000427538 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
VSIG4-203ENST00000427538 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
VSIG4-203ENST00000427538 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
VSIG4-203ENST00000427538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
VSIG4-203ENST00000427538 KIF15Q9NS87 1388 aa13.31□□□□□ -0.28
VSIG4-203ENST00000427538 SHANK2Q9UPX8 1470 aa13.3□□□□□ -0.28
VSIG4-203ENST00000427538 DNMT1P26358 1616 aaKnown RBP13.29□□□□□ -0.28
VSIG4-203ENST00000427538 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
VSIG4-203ENST00000427538 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
VSIG4-203ENST00000427538 REREQ9P2R6 1566 aa13.28□□□□□ -0.28
VSIG4-203ENST00000427538 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
VSIG4-203ENST00000427538 AGLP35573 1532 aa13.27□□□□□ -0.29
VSIG4-203ENST00000427538 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
VSIG4-203ENST00000427538 WASHC2CQ9Y4E1 1318 aa13.26□□□□□ -0.29
VSIG4-203ENST00000427538 DUOX2Q9NRD8 1548 aa13.25□□□□□ -0.29
VSIG4-203ENST00000427538 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
VSIG4-203ENST00000427538 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
VSIG4-203ENST00000427538 KANK1Q14678 1352 aa13.23□□□□□ -0.29
VSIG4-203ENST00000427538 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
VSIG4-203ENST00000427538 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
VSIG4-203ENST00000427538 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
VSIG4-203ENST00000427538 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
VSIG4-203ENST00000427538 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
VSIG4-203ENST00000427538 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
VSIG4-203ENST00000427538 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
VSIG4-203ENST00000427538 ADGRL2O95490 1459 aa13.21□□□□□ -0.3
VSIG4-203ENST00000427538 PTPRMP28827 1452 aa13.21□□□□□ -0.3
VSIG4-203ENST00000427538 PTPRKQ15262 1439 aa13.21□□□□□ -0.3
VSIG4-203ENST00000427538 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
VSIG4-203ENST00000427538 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
VSIG4-203ENST00000427538 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
VSIG4-203ENST00000427538 ADAMTSL3P82987 1691 aa13.19□□□□□ -0.3
VSIG4-203ENST00000427538 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
VSIG4-203ENST00000427538 ZMYM3Q14202 1370 aa13.18□□□□□ -0.3
VSIG4-203ENST00000427538 RIMS1Q86UR5 1692 aaKnown RBP13.18□□□□□ -0.3
VSIG4-203ENST00000427538 TRIM52Q96A61 297 aa13.17□□□□□ -0.3
VSIG4-203ENST00000427538 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
VSIG4-203ENST00000427538 EIF2AK4Q9P2K8 1649 aaKnown RBP13.15□□□□□ -0.3
VSIG4-203ENST00000427538 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
VSIG4-203ENST00000427538 NUP155O75694 1391 aa13.12□□□□□ -0.31
VSIG4-203ENST00000427538 HAX1O00165 279 aa13.12□□□□□ -0.31
VSIG4-203ENST00000427538 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
VSIG4-203ENST00000427538 FAM135AQ9P2D6 1515 aa13.11□□□□□ -0.31
VSIG4-203ENST00000427538 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
VSIG4-203ENST00000427538 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
VSIG4-203ENST00000427538 NAIPQ13075 1403 aa13.1□□□□□ -0.31
VSIG4-203ENST00000427538 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
VSIG4-203ENST00000427538 RNF17Q9BXT8 1623 aaKnown RBP13.1□□□□□ -0.31
VSIG4-203ENST00000427538 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
VSIG4-203ENST00000427538 UHRF1BP1Q6BDS2 1440 aa13.09□□□□□ -0.31
VSIG4-203ENST00000427538 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
VSIG4-203ENST00000427538 ABCC3O15438 1527 aa13.08□□□□□ -0.32
VSIG4-203ENST00000427538 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.32
VSIG4-203ENST00000427538 NPATQ14207 1427 aa13.07□□□□□ -0.32
VSIG4-203ENST00000427538 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
VSIG4-203ENST00000427538 TNRQ92752 1358 aa13.07□□□□□ -0.32
VSIG4-203ENST00000427538 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
VSIG4-203ENST00000427538 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
VSIG4-203ENST00000427538 PZPP20742 1482 aa13.06□□□□□ -0.32
VSIG4-203ENST00000427538 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
VSIG4-203ENST00000427538 C3P01024 1663 aa13.05□□□□□ -0.32
VSIG4-203ENST00000427538 HSPA2P54652 639 aa13.04□□□□□ -0.32
VSIG4-203ENST00000427538 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
VSIG4-203ENST00000427538 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
VSIG4-203ENST00000427538 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
VSIG4-203ENST00000427538 ARHGAP31Q2M1Z3 1444 aa13.03□□□□□ -0.32
VSIG4-203ENST00000427538 LMTK2Q8IWU2 1503 aa13.02□□□□□ -0.33
VSIG4-203ENST00000427538 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.33
VSIG4-203ENST00000427538 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
VSIG4-203ENST00000427538 PROM2Q8N271 834 aa13.01□□□□□ -0.33
VSIG4-203ENST00000427538 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
VSIG4-203ENST00000427538 UNC13BO14795 1591 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms