RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 DEPDC5O75140 1603 aa25.28■■□□□ 1.64
HLA-DQB2-230ENST00000427449 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
HLA-DQB2-230ENST00000427449 RSPH4AQ5TD94 716 aa25.27■■□□□ 1.64
HLA-DQB2-230ENST00000427449 ABCC3O15438 1527 aa25.23■■□□□ 1.63
HLA-DQB2-230ENST00000427449 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
HLA-DQB2-230ENST00000427449 DAPK1P53355 1430 aa25.23■■□□□ 1.63
HLA-DQB2-230ENST00000427449 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
HLA-DQB2-230ENST00000427449 PZPP20742 1482 aa25.22■■□□□ 1.63
HLA-DQB2-230ENST00000427449 NCOA1Q15788 1441 aa25.21■■□□□ 1.63
HLA-DQB2-230ENST00000427449 CAMSAP1Q5T5Y3 1602 aa25.21■■□□□ 1.63
HLA-DQB2-230ENST00000427449 ILDR1Q86SU0 546 aaPredicted RBP25.19■■□□□ 1.62
HLA-DQB2-230ENST00000427449 GGT6Q6P531 493 aa25.18■■□□□ 1.62
HLA-DQB2-230ENST00000427449 PPP6R1Q9UPN7 881 aa25.18■■□□□ 1.62
HLA-DQB2-230ENST00000427449 ADGRL2O95490 1459 aa25.15■■□□□ 1.62
HLA-DQB2-230ENST00000427449 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
HLA-DQB2-230ENST00000427449 SPATA31D1Q6ZQQ2 1576 aa25.15■■□□□ 1.62
HLA-DQB2-230ENST00000427449 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.62
HLA-DQB2-230ENST00000427449 KIF3BO15066 747 aa25.14■■□□□ 1.62
HLA-DQB2-230ENST00000427449 PLA2R1Q13018 1463 aa25.14■■□□□ 1.61
HLA-DQB2-230ENST00000427449 ERBINQ96RT1 1412 aa25.12■■□□□ 1.61
HLA-DQB2-230ENST00000427449 A2ML1A8K2U0 1454 aa25.12■■□□□ 1.61
HLA-DQB2-230ENST00000427449 NEURL4Q96JN8 1562 aa25.12■■□□□ 1.61
HLA-DQB2-230ENST00000427449 PTPRTO14522 1441 aa25.12■■□□□ 1.61
HLA-DQB2-230ENST00000427449 ESF1Q9H501 851 aaKnown RBP25.11■■□□□ 1.61
HLA-DQB2-230ENST00000427449 LTBP4Q8N2S1 1624 aa25.11■■□□□ 1.61
HLA-DQB2-230ENST00000427449 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
HLA-DQB2-230ENST00000427449 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
HLA-DQB2-230ENST00000427449 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
HLA-DQB2-230ENST00000427449 CFAP65Q6ZU64 1925 aaKnown RBP25.06■■□□□ 1.6
HLA-DQB2-230ENST00000427449 ERVK-7P63135 1459 aa25.05■■□□□ 1.6
HLA-DQB2-230ENST00000427449 APLP2Q06481 763 aa25.04■■□□□ 1.6
HLA-DQB2-230ENST00000427449 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
HLA-DQB2-230ENST00000427449 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
HLA-DQB2-230ENST00000427449 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
HLA-DQB2-230ENST00000427449 TNRQ92752 1358 aa25.03■■□□□ 1.6
HLA-DQB2-230ENST00000427449 NLRP1Q9C000 1473 aa25■■□□□ 1.59
HLA-DQB2-230ENST00000427449 UNC13BO14795 1591 aa24.99■■□□□ 1.59
HLA-DQB2-230ENST00000427449 ARHGAP31Q2M1Z3 1444 aa24.99■■□□□ 1.59
HLA-DQB2-230ENST00000427449 WASHC2CQ9Y4E1 1318 aa24.98■■□□□ 1.59
HLA-DQB2-230ENST00000427449 EFCAB6Q5THR3 1501 aa24.96■■□□□ 1.59
HLA-DQB2-230ENST00000427449 SYNMO15061 1565 aa24.96■■□□□ 1.59
HLA-DQB2-230ENST00000427449 FBXO41Q8TF61 875 aa24.95■■□□□ 1.58
HLA-DQB2-230ENST00000427449 UGGT1Q9NYU2 1555 aa24.95■■□□□ 1.58
HLA-DQB2-230ENST00000427449 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
HLA-DQB2-230ENST00000427449 ANKRD30AQ9BXX3 1397 aa24.93■■□□□ 1.58
HLA-DQB2-230ENST00000427449 KDM5AP29375 1690 aaKnown RBP24.93■■□□□ 1.58
HLA-DQB2-230ENST00000427449 PIK3C2BO00750 1634 aa24.93■■□□□ 1.58
HLA-DQB2-230ENST00000427449 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
HLA-DQB2-230ENST00000427449 TET3O43151 1660 aa24.91■■□□□ 1.58
HLA-DQB2-230ENST00000427449 NCKAP5LQ9HCH0 1330 aa24.9■■□□□ 1.58
HLA-DQB2-230ENST00000427449 STRCP1A6NGW2 1772 aa24.9■■□□□ 1.58
HLA-DQB2-230ENST00000427449 CERKQ8TCT0 537 aa24.89■■□□□ 1.58
HLA-DQB2-230ENST00000427449 MED14O60244 1454 aa24.89■■□□□ 1.57
HLA-DQB2-230ENST00000427449 IQGAP1P46940 1657 aa24.88■■□□□ 1.57
HLA-DQB2-230ENST00000427449 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
HLA-DQB2-230ENST00000427449 DMRT2Q9Y5R5 561 aa24.88■■□□□ 1.57
HLA-DQB2-230ENST00000427449 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
HLA-DQB2-230ENST00000427449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.86■■□□□ 1.57
HLA-DQB2-230ENST00000427449 IQSEC2Q5JU85 1478 aa24.85■■□□□ 1.57
HLA-DQB2-230ENST00000427449 ARHGAP23Q9P227 1491 aa24.85■■□□□ 1.57
HLA-DQB2-230ENST00000427449 ANKRD50Q9ULJ7 1429 aa24.85■■□□□ 1.57
HLA-DQB2-230ENST00000427449 E9PCH4 1651 aa24.85■■□□□ 1.57
HLA-DQB2-230ENST00000427449 MYO5BQ9ULV0 1848 aa24.84■■□□□ 1.57
HLA-DQB2-230ENST00000427449 SLIT1O75093 1534 aa24.84■■□□□ 1.57
HLA-DQB2-230ENST00000427449 NOS1P29475 1434 aa24.84■■□□□ 1.57
HLA-DQB2-230ENST00000427449 ROCK1Q13464 1354 aa24.83■■□□□ 1.57
HLA-DQB2-230ENST00000427449 PKD2Q13563 968 aa24.83■■□□□ 1.57
HLA-DQB2-230ENST00000427449 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
HLA-DQB2-230ENST00000427449 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
HLA-DQB2-230ENST00000427449 ZNF335Q9H4Z2 1342 aaPredicted RBP24.79■■□□□ 1.56
HLA-DQB2-230ENST00000427449 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
HLA-DQB2-230ENST00000427449 ADGRB3O60242 1522 aa24.76■■□□□ 1.55
HLA-DQB2-230ENST00000427449 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
HLA-DQB2-230ENST00000427449 ALKQ9UM73 1620 aa24.74■■□□□ 1.55
HLA-DQB2-230ENST00000427449 XIRP1Q702N8 1843 aaKnown RBP24.74■■□□□ 1.55
HLA-DQB2-230ENST00000427449 NPHP4O75161 1426 aaPredicted RBP24.73■■□□□ 1.55
HLA-DQB2-230ENST00000427449 KANK1Q14678 1352 aa24.72■■□□□ 1.55
HLA-DQB2-230ENST00000427449 TMEM131LA2VDJ0 1609 aa24.71■■□□□ 1.55
HLA-DQB2-230ENST00000427449 SCAF11Q99590 1463 aaKnown RBP24.7■■□□□ 1.55
HLA-DQB2-230ENST00000427449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.7■■□□□ 1.54
HLA-DQB2-230ENST00000427449 CPS1P31327 1500 aa24.69■■□□□ 1.54
HLA-DQB2-230ENST00000427449 THEMISQ8N1K5 641 aaPredicted RBP24.68■■□□□ 1.54
HLA-DQB2-230ENST00000427449 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
HLA-DQB2-230ENST00000427449 LTKP29376 864 aa24.62■■□□□ 1.53
HLA-DQB2-230ENST00000427449 ANKLE2Q86XL3 938 aa24.62■■□□□ 1.53
HLA-DQB2-230ENST00000427449 TMEM2Q9UHN6 1383 aa24.62■■□□□ 1.53
HLA-DQB2-230ENST00000427449 NAIPQ13075 1403 aa24.61■■□□□ 1.53
HLA-DQB2-230ENST00000427449 ZFYVE9O95405 1425 aa24.61■■□□□ 1.53
HLA-DQB2-230ENST00000427449 IDI1Q13907 227 aa24.6■■□□□ 1.53
HLA-DQB2-230ENST00000427449 NWD1Q149M9 1564 aa24.58■■□□□ 1.52
HLA-DQB2-230ENST00000427449 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
HLA-DQB2-230ENST00000427449 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
HLA-DQB2-230ENST00000427449 CLTCL1P53675 1640 aa24.52■■□□□ 1.52
HLA-DQB2-230ENST00000427449 CHD2O14647 1828 aaKnown RBP24.51■■□□□ 1.51
HLA-DQB2-230ENST00000427449 NRXN3Q9Y4C0 1643 aa24.5■■□□□ 1.51
HLA-DQB2-230ENST00000427449 ITGAEP38570 1179 aa24.5■■□□□ 1.51
HLA-DQB2-230ENST00000427449 NUP155O75694 1391 aa24.48■■□□□ 1.51
HLA-DQB2-230ENST00000427449 TRPM2O94759 1503 aa24.47■■□□□ 1.51
HLA-DQB2-230ENST00000427449 SLC52A1Q9NWF4 448 aa24.47■■□□□ 1.51
HLA-DQB2-230ENST00000427449 TXNDC2Q86VQ3 553 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms