RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ARHGEF12Q9NZN5 1544 aa11.48□□□□□ -0.57
LINC01049-201ENST00000426840 MYOM3Q5VTT5 1437 aa11.47□□□□□ -0.57
LINC01049-201ENST00000426840 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
LINC01049-201ENST00000426840 SAMD9LQ8IVG5 1584 aa11.46□□□□□ -0.57
LINC01049-201ENST00000426840 KIAA1107Q9UPP5 1409 aa11.46□□□□□ -0.57
LINC01049-201ENST00000426840 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
LINC01049-201ENST00000426840 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
LINC01049-201ENST00000426840 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
LINC01049-201ENST00000426840 TRAPPC8Q9Y2L5 1435 aa11.45□□□□□ -0.58
LINC01049-201ENST00000426840 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
LINC01049-201ENST00000426840 RICTORQ6R327 1708 aa11.44□□□□□ -0.58
LINC01049-201ENST00000426840 FRMPD1Q5SYB0 1578 aa11.44□□□□□ -0.58
LINC01049-201ENST00000426840 ABCC1P33527 1531 aa11.44□□□□□ -0.58
LINC01049-201ENST00000426840 PLEKHH2Q8IVE3 1493 aa11.44□□□□□ -0.58
LINC01049-201ENST00000426840 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
LINC01049-201ENST00000426840 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
LINC01049-201ENST00000426840 DCAF8Q5TAQ9 597 aa11.43□□□□□ -0.58
LINC01049-201ENST00000426840 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
LINC01049-201ENST00000426840 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
LINC01049-201ENST00000426840 CAMSAP2Q08AD1 1489 aa11.42□□□□□ -0.58
LINC01049-201ENST00000426840 FGD6Q6ZV73 1430 aa11.42□□□□□ -0.58
LINC01049-201ENST00000426840 SYCP2Q9BX26 1530 aa11.41□□□□□ -0.58
LINC01049-201ENST00000426840 ZNF518AQ6AHZ1 1483 aa11.41□□□□□ -0.58
LINC01049-201ENST00000426840 FAM212AQ96EL1 285 aa11.41□□□□□ -0.58
LINC01049-201ENST00000426840 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.59
LINC01049-201ENST00000426840 TCOF1Q13428 1488 aaKnown RBP11.39□□□□□ -0.59
LINC01049-201ENST00000426840 MAGI2Q86UL8 1455 aa11.39□□□□□ -0.59
LINC01049-201ENST00000426840 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
LINC01049-201ENST00000426840 KDM5CP41229 1560 aa11.39□□□□□ -0.59
LINC01049-201ENST00000426840 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
LINC01049-201ENST00000426840 YEATS2Q9ULM3 1422 aa11.39□□□□□ -0.59
LINC01049-201ENST00000426840 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
LINC01049-201ENST00000426840 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
LINC01049-201ENST00000426840 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
LINC01049-201ENST00000426840 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
LINC01049-201ENST00000426840 FAM50AQ14320 339 aaKnown RBP11.37□□□□□ -0.59
LINC01049-201ENST00000426840 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
LINC01049-201ENST00000426840 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
LINC01049-201ENST00000426840 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
LINC01049-201ENST00000426840 ARHGEF5Q12774 1597 aa11.37□□□□□ -0.59
LINC01049-201ENST00000426840 RTEL1-TNFRSF6BF6WH68 1400 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 ABCC5O15440 1437 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 GABBR2O75899 941 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 ATP10AO60312 1499 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 KIDINS220Q9ULH0 1771 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
LINC01049-201ENST00000426840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01049-201ENST00000426840 RRBP1Q9P2E9 1410 aaKnown RBP11.34□□□□□ -0.59
LINC01049-201ENST00000426840 HECW2Q9P2P5 1572 aa11.33□□□□□ -0.6
LINC01049-201ENST00000426840 DAPK1P53355 1430 aa11.33□□□□□ -0.6
LINC01049-201ENST00000426840 ATP7AQ04656 1500 aa11.32□□□□□ -0.6
LINC01049-201ENST00000426840 ARHGEF40Q8TER5 1519 aa11.32□□□□□ -0.6
LINC01049-201ENST00000426840 PYGBP11216 843 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 GSE1Q14687 1217 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 INO80Q9ULG1 1556 aaPredicted RBP11.31□□□□□ -0.6
LINC01049-201ENST00000426840 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
LINC01049-201ENST00000426840 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
LINC01049-201ENST00000426840 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
LINC01049-201ENST00000426840 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
LINC01049-201ENST00000426840 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
LINC01049-201ENST00000426840 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
LINC01049-201ENST00000426840 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
LINC01049-201ENST00000426840 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
LINC01049-201ENST00000426840 A2MP01023 1474 aa11.28□□□□□ -0.6
LINC01049-201ENST00000426840 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
LINC01049-201ENST00000426840 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
LINC01049-201ENST00000426840 ITGAEP38570 1179 aa11.28□□□□□ -0.6
LINC01049-201ENST00000426840 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
LINC01049-201ENST00000426840 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
LINC01049-201ENST00000426840 MAP3K13O43283 966 aa11.27□□□□□ -0.61
LINC01049-201ENST00000426840 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
LINC01049-201ENST00000426840 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
LINC01049-201ENST00000426840 AGLP35573 1532 aa11.26□□□□□ -0.61
LINC01049-201ENST00000426840 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
LINC01049-201ENST00000426840 CROCC2H7BZ55 1655 aa11.26□□□□□ -0.61
LINC01049-201ENST00000426840 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
LINC01049-201ENST00000426840 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
LINC01049-201ENST00000426840 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
LINC01049-201ENST00000426840 MLECQ14165 292 aa11.25□□□□□ -0.61
LINC01049-201ENST00000426840 KIF3BO15066 747 aa11.24□□□□□ -0.61
LINC01049-201ENST00000426840 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
LINC01049-201ENST00000426840 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
LINC01049-201ENST00000426840 ROCK1Q13464 1354 aa11.23□□□□□ -0.61
LINC01049-201ENST00000426840 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
LINC01049-201ENST00000426840 ADAMTSL3P82987 1691 aa11.22□□□□□ -0.61
LINC01049-201ENST00000426840 GGT6Q6P531 493 aa11.22□□□□□ -0.61
LINC01049-201ENST00000426840 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
LINC01049-201ENST00000426840 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
LINC01049-201ENST00000426840 CLCN6P51797 869 aa11.2□□□□□ -0.62
LINC01049-201ENST00000426840 ERBINQ96RT1 1412 aa11.18□□□□□ -0.62
LINC01049-201ENST00000426840 ANKRD50Q9ULJ7 1429 aa11.18□□□□□ -0.62
LINC01049-201ENST00000426840 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
LINC01049-201ENST00000426840 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
LINC01049-201ENST00000426840 PCDHB8Q9UN66 801 aa11.17□□□□□ -0.62
LINC01049-201ENST00000426840 NAIPQ13075 1403 aa11.17□□□□□ -0.62
LINC01049-201ENST00000426840 MADDQ8WXG6 1647 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms