RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 TPRNQ4KMQ1 711 aa10.5□□□□□ -0.73
NIF3L1-207ENST00000426253 PREX1Q8TCU6 1659 aa10.5□□□□□ -0.73
NIF3L1-207ENST00000426253 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
NIF3L1-207ENST00000426253 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
NIF3L1-207ENST00000426253 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
NIF3L1-207ENST00000426253 LTBP4Q8N2S1 1624 aa10.48□□□□□ -0.73
NIF3L1-207ENST00000426253 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
NIF3L1-207ENST00000426253 CADPS2Q86UW7 1296 aa10.47□□□□□ -0.73
NIF3L1-207ENST00000426253 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
NIF3L1-207ENST00000426253 WDR70Q9NW82 654 aa10.47□□□□□ -0.73
NIF3L1-207ENST00000426253 IGF1RP08069 1367 aa10.47□□□□□ -0.73
NIF3L1-207ENST00000426253 KIF27Q86VH2 1401 aa10.46□□□□□ -0.74
NIF3L1-207ENST00000426253 POGZQ7Z3K3 1410 aa10.45□□□□□ -0.74
NIF3L1-207ENST00000426253 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
NIF3L1-207ENST00000426253 FER1L4A9Z1Z3 1794 aa10.44□□□□□ -0.74
NIF3L1-207ENST00000426253 PTPRTO14522 1441 aa10.44□□□□□ -0.74
NIF3L1-207ENST00000426253 PPP1R37O75864 691 aa10.44□□□□□ -0.74
NIF3L1-207ENST00000426253 MLECQ14165 292 aa10.44□□□□□ -0.74
NIF3L1-207ENST00000426253 HSPA1LP34931 641 aa10.43□□□□□ -0.74
NIF3L1-207ENST00000426253 ARHGEF40Q8TER5 1519 aa10.42□□□□□ -0.74
NIF3L1-207ENST00000426253 FANCAO15360 1455 aa10.42□□□□□ -0.74
NIF3L1-207ENST00000426253 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
NIF3L1-207ENST00000426253 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
NIF3L1-207ENST00000426253 UHRF1BP1Q6BDS2 1440 aa10.41□□□□□ -0.74
NIF3L1-207ENST00000426253 IQGAP2Q13576 1575 aa10.4□□□□□ -0.74
NIF3L1-207ENST00000426253 FRMPD1Q5SYB0 1578 aa10.4□□□□□ -0.74
NIF3L1-207ENST00000426253 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
NIF3L1-207ENST00000426253 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
NIF3L1-207ENST00000426253 PHLDB1Q86UU1 1377 aa10.39□□□□□ -0.75
NIF3L1-207ENST00000426253 PIP4K2BP78356 416 aa10.39□□□□□ -0.75
NIF3L1-207ENST00000426253 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
NIF3L1-207ENST00000426253 DISP1Q96F81 1524 aa10.38□□□□□ -0.75
NIF3L1-207ENST00000426253 TIE1P35590 1138 aa10.37□□□□□ -0.75
NIF3L1-207ENST00000426253 CEBPAP49715 358 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-207ENST00000426253 CLCN6P51797 869 aa10.36□□□□□ -0.75
NIF3L1-207ENST00000426253 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-207ENST00000426253 MS4A4AQ96JQ5 239 aa10.36□□□□□ -0.75
NIF3L1-207ENST00000426253 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
NIF3L1-207ENST00000426253 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
NIF3L1-207ENST00000426253 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
NIF3L1-207ENST00000426253 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
NIF3L1-207ENST00000426253 NEO1Q92859 1461 aa10.34□□□□□ -0.75
NIF3L1-207ENST00000426253 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
NIF3L1-207ENST00000426253 PDE4AP27815 886 aa10.32□□□□□ -0.76
NIF3L1-207ENST00000426253 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
NIF3L1-207ENST00000426253 KIAA0556O60303 1618 aa10.32□□□□□ -0.76
NIF3L1-207ENST00000426253 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
NIF3L1-207ENST00000426253 E2F4Q16254 413 aa10.31□□□□□ -0.76
NIF3L1-207ENST00000426253 ABCA9Q8IUA7 1624 aa10.3□□□□□ -0.76
NIF3L1-207ENST00000426253 ZFYVE16Q7Z3T8 1539 aa10.3□□□□□ -0.76
NIF3L1-207ENST00000426253 ARID3CA6NKF2 412 aa10.29□□□□□ -0.76
NIF3L1-207ENST00000426253 RICTORQ6R327 1708 aa10.29□□□□□ -0.76
NIF3L1-207ENST00000426253 DENND4BO75064 1496 aaPredicted RBP10.29□□□□□ -0.76
NIF3L1-207ENST00000426253 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
NIF3L1-207ENST00000426253 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 TOM1O60784 492 aa10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 BMP2KQ9NSY1 1161 aaPredicted RBP10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
NIF3L1-207ENST00000426253 MFSD10Q14728 455 aa10.27□□□□□ -0.77
NIF3L1-207ENST00000426253 UGGT2Q9NYU1 1516 aa10.27□□□□□ -0.77
NIF3L1-207ENST00000426253 SETD1BQ9UPS6 1966 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-207ENST00000426253 HAX1O00165 279 aa10.26□□□□□ -0.77
NIF3L1-207ENST00000426253 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-207ENST00000426253 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
NIF3L1-207ENST00000426253 RGS17Q9UGC6 210 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-207ENST00000426253 SETD1AO15047 1707 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-207ENST00000426253 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-207ENST00000426253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
NIF3L1-207ENST00000426253 ABCA8O94911 1581 aa10.25□□□□□ -0.77
NIF3L1-207ENST00000426253 CAMSAP1Q5T5Y3 1602 aa10.24□□□□□ -0.77
NIF3L1-207ENST00000426253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
NIF3L1-207ENST00000426253 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
NIF3L1-207ENST00000426253 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
NIF3L1-207ENST00000426253 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
NIF3L1-207ENST00000426253 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
NIF3L1-207ENST00000426253 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.77
NIF3L1-207ENST00000426253 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
NIF3L1-207ENST00000426253 C3P01024 1663 aa10.21□□□□□ -0.78
NIF3L1-207ENST00000426253 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-207ENST00000426253 EVX2Q03828 476 aa10.2□□□□□ -0.78
NIF3L1-207ENST00000426253 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
NIF3L1-207ENST00000426253 MAGI2Q86UL8 1455 aa10.2□□□□□ -0.78
NIF3L1-207ENST00000426253 PRXQ9BXM0 1461 aa10.2□□□□□ -0.78
NIF3L1-207ENST00000426253 CFAP74Q9C0B2 1584 aa10.19□□□□□ -0.78
NIF3L1-207ENST00000426253 CAMK2BQ13554 666 aa10.19□□□□□ -0.78
NIF3L1-207ENST00000426253 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
NIF3L1-207ENST00000426253 C9orf84Q5VXU9 1444 aa10.18□□□□□ -0.78
NIF3L1-207ENST00000426253 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-207ENST00000426253 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
NIF3L1-207ENST00000426253 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
NIF3L1-207ENST00000426253 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
NIF3L1-207ENST00000426253 ATP10AO60312 1499 aa10.17□□□□□ -0.78
NIF3L1-207ENST00000426253 ATP10BO94823 1461 aa10.17□□□□□ -0.78
NIF3L1-207ENST00000426253 EEA1Q15075 1411 aa10.16□□□□□ -0.78
NIF3L1-207ENST00000426253 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-207ENST00000426253 ATMINO43313 823 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-207ENST00000426253 ATN1P54259 1190 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-207ENST00000426253 IER5LQ5T953 404 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms