RNA–Protein interactions for RNA: ENST00000426221.5

SCML4-205, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 3

Gene SCML4, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-205ENST00000426221 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.38
SCML4-205ENST00000426221 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
SCML4-205ENST00000426221 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
SCML4-205ENST00000426221 GGT6Q6P531 493 aa23.69■■□□□ 1.38
SCML4-205ENST00000426221 NCOA1Q15788 1441 aa23.68■■□□□ 1.38
SCML4-205ENST00000426221 KIF3BO15066 747 aa23.68■■□□□ 1.38
SCML4-205ENST00000426221 RRP7BPQ9NSQ0 103 aa23.68■■□□□ 1.38
SCML4-205ENST00000426221 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
SCML4-205ENST00000426221 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
SCML4-205ENST00000426221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
SCML4-205ENST00000426221 CAMSAP1Q5T5Y3 1602 aa23.66■■□□□ 1.38
SCML4-205ENST00000426221 FAM135AQ9P2D6 1515 aa23.65■■□□□ 1.38
SCML4-205ENST00000426221 ITGAEP38570 1179 aa23.65■■□□□ 1.38
SCML4-205ENST00000426221 CEBPAP49715 358 aaPredicted RBP23.65■■□□□ 1.38
SCML4-205ENST00000426221 ABCC3O15438 1527 aa23.64■■□□□ 1.37
SCML4-205ENST00000426221 GCC2Q8IWJ2 1684 aa23.64■■□□□ 1.37
SCML4-205ENST00000426221 ESF1Q9H501 851 aaKnown RBP23.63■■□□□ 1.37
SCML4-205ENST00000426221 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
SCML4-205ENST00000426221 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
SCML4-205ENST00000426221 UNC13BO14795 1591 aa23.59■■□□□ 1.37
SCML4-205ENST00000426221 ROCK1Q13464 1354 aa23.57■■□□□ 1.36
SCML4-205ENST00000426221 ZMYM3Q14202 1370 aa23.56■■□□□ 1.36
SCML4-205ENST00000426221 ANKRD50Q9ULJ7 1429 aa23.56■■□□□ 1.36
SCML4-205ENST00000426221 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
SCML4-205ENST00000426221 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
SCML4-205ENST00000426221 ZNF142P52746 1687 aaPredicted RBP23.55■■□□□ 1.36
SCML4-205ENST00000426221 PZPP20742 1482 aa23.53■■□□□ 1.36
SCML4-205ENST00000426221 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
SCML4-205ENST00000426221 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
SCML4-205ENST00000426221 NPATQ14207 1427 aa23.5■■□□□ 1.35
SCML4-205ENST00000426221 PPP6R1Q9UPN7 881 aa23.49■■□□□ 1.35
SCML4-205ENST00000426221 UHRF1BP1Q6BDS2 1440 aa23.49■■□□□ 1.35
SCML4-205ENST00000426221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.35
SCML4-205ENST00000426221 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
SCML4-205ENST00000426221 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
SCML4-205ENST00000426221 TET3O43151 1660 aa23.48■■□□□ 1.35
SCML4-205ENST00000426221 LMTK2Q8IWU2 1503 aa23.47■■□□□ 1.35
SCML4-205ENST00000426221 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
SCML4-205ENST00000426221 SPATA31D1Q6ZQQ2 1576 aa23.46■■□□□ 1.35
SCML4-205ENST00000426221 NAIPQ13075 1403 aa23.44■■□□□ 1.34
SCML4-205ENST00000426221 ERVK-7P63135 1459 aa23.43■■□□□ 1.34
SCML4-205ENST00000426221 KANK1Q14678 1352 aa23.43■■□□□ 1.34
SCML4-205ENST00000426221 E9PCH4 1651 aa23.42■■□□□ 1.34
SCML4-205ENST00000426221 HSPA2P54652 639 aa23.41■■□□□ 1.34
SCML4-205ENST00000426221 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
SCML4-205ENST00000426221 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
SCML4-205ENST00000426221 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
SCML4-205ENST00000426221 TNRQ92752 1358 aa23.39■■□□□ 1.33
SCML4-205ENST00000426221 SYNMO15061 1565 aa23.37■■□□□ 1.33
SCML4-205ENST00000426221 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
SCML4-205ENST00000426221 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
SCML4-205ENST00000426221 PIK3C2BO00750 1634 aa23.33■■□□□ 1.33
SCML4-205ENST00000426221 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
SCML4-205ENST00000426221 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.33
SCML4-205ENST00000426221 SPHKAPQ2M3C7 1700 aa23.3■■□□□ 1.32
SCML4-205ENST00000426221 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
SCML4-205ENST00000426221 NUP155O75694 1391 aa23.29■■□□□ 1.32
SCML4-205ENST00000426221 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
SCML4-205ENST00000426221 UGGT1Q9NYU2 1555 aa23.28■■□□□ 1.32
SCML4-205ENST00000426221 RPRD2Q5VT52 1461 aaKnown RBP23.27■■□□□ 1.32
SCML4-205ENST00000426221 NOS1P29475 1434 aa23.25■■□□□ 1.31
SCML4-205ENST00000426221 PLA2R1Q13018 1463 aa23.22■■□□□ 1.31
SCML4-205ENST00000426221 ADGRB3O60242 1522 aa23.22■■□□□ 1.31
SCML4-205ENST00000426221 NEURL4Q96JN8 1562 aa23.22■■□□□ 1.31
SCML4-205ENST00000426221 KDM5AP29375 1690 aaKnown RBP23.22■■□□□ 1.31
SCML4-205ENST00000426221 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
SCML4-205ENST00000426221 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
SCML4-205ENST00000426221 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
SCML4-205ENST00000426221 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
SCML4-205ENST00000426221 RAB3GAP2Q9H2M9 1393 aa23.14■■□□□ 1.29
SCML4-205ENST00000426221 TRPM2O94759 1503 aa23.13■■□□□ 1.29
SCML4-205ENST00000426221 IQGAP1P46940 1657 aa23.13■■□□□ 1.29
SCML4-205ENST00000426221 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
SCML4-205ENST00000426221 SLIT1O75093 1534 aa23.1■■□□□ 1.29
SCML4-205ENST00000426221 KIF1BO60333 1816 aa23.1■■□□□ 1.29
SCML4-205ENST00000426221 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
SCML4-205ENST00000426221 IDI1Q13907 227 aa23.08■■□□□ 1.29
SCML4-205ENST00000426221 PTPRTO14522 1441 aa23.08■■□□□ 1.28
SCML4-205ENST00000426221 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
SCML4-205ENST00000426221 PKD2Q13563 968 aa23.04■■□□□ 1.28
SCML4-205ENST00000426221 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
SCML4-205ENST00000426221 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
SCML4-205ENST00000426221 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
SCML4-205ENST00000426221 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
SCML4-205ENST00000426221 MED14O60244 1454 aa23.01■■□□□ 1.27
SCML4-205ENST00000426221 FOXD1Q16676 465 aa23.01■■□□□ 1.27
SCML4-205ENST00000426221 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
SCML4-205ENST00000426221 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
SCML4-205ENST00000426221 STRCP1A6NGW2 1772 aa22.98■■□□□ 1.27
SCML4-205ENST00000426221 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
SCML4-205ENST00000426221 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
SCML4-205ENST00000426221 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
SCML4-205ENST00000426221 DMRT2Q9Y5R5 561 aa22.97■■□□□ 1.27
SCML4-205ENST00000426221 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
SCML4-205ENST00000426221 MPHOSPH9Q99550 1183 aa22.96■■□□□ 1.27
SCML4-205ENST00000426221 LTKP29376 864 aa22.95■■□□□ 1.26
SCML4-205ENST00000426221 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
SCML4-205ENST00000426221 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
SCML4-205ENST00000426221 PPLO60437 1756 aa22.93■■□□□ 1.26
SCML4-205ENST00000426221 IFT172Q9UG01 1749 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms