RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 CENPJQ9HC77 1338 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-207ENST00000426142 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-207ENST00000426142 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
CTNND1-207ENST00000426142 FGD5Q6ZNL6 1462 aa9.97□□□□□ -0.81
CTNND1-207ENST00000426142 NOL8Q76FK4 1167 aaKnown RBP9.96□□□□□ -0.81
CTNND1-207ENST00000426142 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-207ENST00000426142 BCL2L13Q9BXK5 485 aa9.96□□□□□ -0.81
CTNND1-207ENST00000426142 DRC7Q8IY82 874 aa9.96□□□□□ -0.82
CTNND1-207ENST00000426142 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-207ENST00000426142 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
CTNND1-207ENST00000426142 GAPVD1Q14C86 1478 aa9.95□□□□□ -0.82
CTNND1-207ENST00000426142 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
CTNND1-207ENST00000426142 KIF15Q9NS87 1388 aa9.95□□□□□ -0.82
CTNND1-207ENST00000426142 COG3Q96JB2 828 aa9.95□□□□□ -0.82
CTNND1-207ENST00000426142 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-207ENST00000426142 CFAP44Q96MT7 982 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-207ENST00000426142 FOXD4L1Q9NU39 408 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 DHX57Q6P158 1386 aaKnown RBP9.94□□□□□ -0.82
CTNND1-207ENST00000426142 FAM69CQ0P6D2 419 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-207ENST00000426142 HSP90B1P14625 803 aaKnown RBP9.94□□□□□ -0.82
CTNND1-207ENST00000426142 ERICH6BQ5W0A0 696 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 EVA1CP58658 441 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 LMOD3Q0VAK6 560 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 G3V3G9 751 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 DCAF8Q5TAQ9 597 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
CTNND1-207ENST00000426142 EVC2Q86UK5 1308 aa9.93□□□□□ -0.82
CTNND1-207ENST00000426142 MYBBP1AQ9BQG0 1328 aaKnown RBP9.93□□□□□ -0.82
CTNND1-207ENST00000426142 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-207ENST00000426142 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
CTNND1-207ENST00000426142 HMMRO75330 724 aa9.93□□□□□ -0.82
CTNND1-207ENST00000426142 AQRO60306 1485 aaKnown RBP eCLIP9.93□□□□□ -0.822e-9■■■□□ 18.1
CTNND1-207ENST00000426142 PLIN1O60240 522 aa9.93□□□□□ -0.82
CTNND1-207ENST00000426142 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
CTNND1-207ENST00000426142 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
CTNND1-207ENST00000426142 NRDCO43847 1150 aa9.92□□□□□ -0.82
CTNND1-207ENST00000426142 C1orf141Q5JVX7 400 aa9.92□□□□□ -0.82
CTNND1-207ENST00000426142 USP47Q96K76 1375 aa9.92□□□□□ -0.82
CTNND1-207ENST00000426142 FRAT2O75474 233 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-207ENST00000426142 NECTIN2Q92692 538 aa9.91□□□□□ -0.82
CTNND1-207ENST00000426142 CHMP4AQ9BY43 222 aa9.91□□□□□ -0.82
CTNND1-207ENST00000426142 IGF1RP08069 1367 aa9.9□□□□□ -0.82
CTNND1-207ENST00000426142 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
CTNND1-207ENST00000426142 TOMM22Q9NS69 142 aa9.9□□□□□ -0.82
CTNND1-207ENST00000426142 EIF2S2P20042 333 aaKnown RBP9.9□□□□□ -0.82
CTNND1-207ENST00000426142 KLHL34Q8N239 644 aa9.9□□□□□ -0.83
CTNND1-207ENST00000426142 MSH5O43196 834 aa9.89□□□□□ -0.83
CTNND1-207ENST00000426142 PHLDB1Q86UU1 1377 aa9.89□□□□□ -0.83
CTNND1-207ENST00000426142 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
CTNND1-207ENST00000426142 PSME1Q06323 249 aa9.88□□□□□ -0.83
CTNND1-207ENST00000426142 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-207ENST00000426142 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-207ENST00000426142 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
CTNND1-207ENST00000426142 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-207ENST00000426142 TEFQ10587 303 aa9.88□□□□□ -0.83
CTNND1-207ENST00000426142 RILPL2Q969X0 211 aa9.88□□□□□ -0.83
CTNND1-207ENST00000426142 HDAC5Q9UQL6 1122 aa9.88□□□□□ -0.83
CTNND1-207ENST00000426142 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
CTNND1-207ENST00000426142 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
CTNND1-207ENST00000426142 APAF1O14727 1248 aa9.87□□□□□ -0.83
CTNND1-207ENST00000426142 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
CTNND1-207ENST00000426142 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
CTNND1-207ENST00000426142 PRKRIP1Q9H875 184 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-207ENST00000426142 ANKRD45Q5TZF3 282 aa9.86□□□□□ -0.83
CTNND1-207ENST00000426142 CHAF1AQ13111 956 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-207ENST00000426142 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
CTNND1-207ENST00000426142 DIAPH1O60610 1272 aaKnown RBP9.85□□□□□ -0.83
CTNND1-207ENST00000426142 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
CTNND1-207ENST00000426142 TMEM132EQ6IEE7 984 aa9.85□□□□□ -0.83
CTNND1-207ENST00000426142 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
CTNND1-207ENST00000426142 MEX3CQ5U5Q3 659 aaKnown RBP9.85□□□□□ -0.83
CTNND1-207ENST00000426142 EXOC6Q8TAG9 804 aa9.85□□□□□ -0.83
CTNND1-207ENST00000426142 CRBNQ96SW2 442 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 RIPK4P57078 832 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 RASSF8Q8NHQ8 419 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 E9PSI1 815 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 HMOX1P09601 288 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 CREBRFQ8IUR6 639 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 PRM3Q9NNZ6 103 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 ZKSCAN2Q63HK3 967 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 FGD6Q6ZV73 1430 aa9.84□□□□□ -0.83
CTNND1-207ENST00000426142 HTATSF1O43719 755 aaKnown RBP9.83□□□□□ -0.84
CTNND1-207ENST00000426142 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
CTNND1-207ENST00000426142 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
CTNND1-207ENST00000426142 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
CTNND1-207ENST00000426142 GGNBP2Q9H3C7 697 aa9.82□□□□□ -0.84
CTNND1-207ENST00000426142 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-207ENST00000426142 FOXD4L6Q3SYB3 417 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-207ENST00000426142 FOXD4L3Q6VB84 417 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-207ENST00000426142 RRP1P56182 461 aaKnown RBP9.81□□□□□ -0.84
CTNND1-207ENST00000426142 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNND1-207ENST00000426142 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
CTNND1-207ENST00000426142 SLC4A3P48751 1232 aa9.81□□□□□ -0.84
CTNND1-207ENST00000426142 NEXNQ0ZGT2 675 aa9.81□□□□□ -0.84
CTNND1-207ENST00000426142 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
CTNND1-207ENST00000426142 CUX1P39880 1505 aa9.81□□□□□ -0.84
CTNND1-207ENST00000426142 ATF3P18847 181 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms