RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 DHX29Q7Z478 1369 aaKnown RBP24.9■■□□□ 1.58
FN1-208ENST00000426059 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
FN1-208ENST00000426059 MAGI2Q86UL8 1455 aa24.9■■□□□ 1.58
FN1-208ENST00000426059 PPRC1Q5VV67 1664 aaKnown RBP24.89■■□□□ 1.57
FN1-208ENST00000426059 HECW2Q9P2P5 1572 aa24.88■■□□□ 1.57
FN1-208ENST00000426059 KIF13AQ9H1H9 1805 aa24.88■■□□□ 1.57
FN1-208ENST00000426059 MLH3Q9UHC1 1453 aa24.87■■□□□ 1.57
FN1-208ENST00000426059 RICTORQ6R327 1708 aa24.86■■□□□ 1.57
FN1-208ENST00000426059 TEX14Q8IWB6 1497 aa24.85■■□□□ 1.57
FN1-208ENST00000426059 HIRIP3Q9BW71 556 aaPredicted RBP24.85■■□□□ 1.57
FN1-208ENST00000426059 A2MP01023 1474 aa24.84■■□□□ 1.57
FN1-208ENST00000426059 ABCA6Q8N139 1617 aa24.84■■□□□ 1.57
FN1-208ENST00000426059 DEPDC5O75140 1603 aa24.83■■□□□ 1.56
FN1-208ENST00000426059 FRMPD1Q5SYB0 1578 aa24.8■■□□□ 1.56
FN1-208ENST00000426059 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
FN1-208ENST00000426059 EIF2AK4Q9P2K8 1649 aaKnown RBP24.8■■□□□ 1.56
FN1-208ENST00000426059 NBPF8Q3BBV2 869 aa24.78■■□□□ 1.56
FN1-208ENST00000426059 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
FN1-208ENST00000426059 MROH1Q8NDA8 1641 aa24.78■■□□□ 1.56
FN1-208ENST00000426059 E9PCH4 1651 aa24.76■■□□□ 1.55
FN1-208ENST00000426059 GGT6Q6P531 493 aa24.76■■□□□ 1.55
FN1-208ENST00000426059 KANK1Q14678 1352 aa24.76■■□□□ 1.55
FN1-208ENST00000426059 DIP2CQ9Y2E4 1556 aa24.75■■□□□ 1.55
FN1-208ENST00000426059 CCDC144AA2RUR9 1427 aa24.75■■□□□ 1.55
FN1-208ENST00000426059 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
FN1-208ENST00000426059 ZNF326Q5BKZ1 582 aaKnown RBP24.73■■□□□ 1.55
FN1-208ENST00000426059 VWDEQ8N2E2 1590 aa24.73■■□□□ 1.55
FN1-208ENST00000426059 RGL3Q3MIN7 710 aa24.71■■□□□ 1.55
FN1-208ENST00000426059 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.54
FN1-208ENST00000426059 TET3O43151 1660 aa24.69■■□□□ 1.54
FN1-208ENST00000426059 COL17A1Q9UMD9 1497 aaPredicted RBP24.69■■□□□ 1.54
FN1-208ENST00000426059 CEP152O94986 1710 aa24.68■■□□□ 1.54
FN1-208ENST00000426059 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
FN1-208ENST00000426059 DCAF11Q8TEB1 546 aa24.67■■□□□ 1.54
FN1-208ENST00000426059 ATP10AO60312 1499 aa24.66■■□□□ 1.54
FN1-208ENST00000426059 ZMYM4Q5VZL5 1548 aa24.65■■□□□ 1.54
FN1-208ENST00000426059 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
FN1-208ENST00000426059 CFAP65Q6ZU64 1925 aaKnown RBP24.62■■□□□ 1.53
FN1-208ENST00000426059 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
FN1-208ENST00000426059 BCORL1Q5H9F3 1711 aa24.61■■□□□ 1.53
FN1-208ENST00000426059 HSPA5P11021 654 aaKnown RBP24.6■■□□□ 1.53
FN1-208ENST00000426059 EFCAB6Q5THR3 1501 aa24.6■■□□□ 1.53
FN1-208ENST00000426059 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
FN1-208ENST00000426059 PTPRTO14522 1441 aa24.59■■□□□ 1.53
FN1-208ENST00000426059 TRPM2O94759 1503 aa24.58■■□□□ 1.53
FN1-208ENST00000426059 CLTCL1P53675 1640 aa24.57■■□□□ 1.52
FN1-208ENST00000426059 UGGT1Q9NYU2 1555 aa24.56■■□□□ 1.52
FN1-208ENST00000426059 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
FN1-208ENST00000426059 LMTK2Q8IWU2 1503 aa24.56■■□□□ 1.52
FN1-208ENST00000426059 MIER1Q8N108 512 aa24.56■■□□□ 1.52
FN1-208ENST00000426059 ABCC3O15438 1527 aa24.55■■□□□ 1.52
FN1-208ENST00000426059 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
FN1-208ENST00000426059 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
FN1-208ENST00000426059 NPATQ14207 1427 aa24.53■■□□□ 1.52
FN1-208ENST00000426059 UHRF1BP1Q6BDS2 1440 aa24.53■■□□□ 1.52
FN1-208ENST00000426059 SIGLEC1Q9BZZ2 1709 aa24.52■■□□□ 1.52
FN1-208ENST00000426059 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
FN1-208ENST00000426059 CAMSAP1Q5T5Y3 1602 aa24.49■■□□□ 1.51
FN1-208ENST00000426059 MLECQ14165 292 aa24.48■■□□□ 1.51
FN1-208ENST00000426059 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
FN1-208ENST00000426059 RALGAPBQ86X10 1494 aa24.45■■□□□ 1.5
FN1-208ENST00000426059 ARHGEF40Q8TER5 1519 aa24.44■■□□□ 1.5
FN1-208ENST00000426059 CARD11Q9BXL7 1154 aa24.44■■□□□ 1.5
FN1-208ENST00000426059 C11orf95C9JLR9 678 aaPredicted RBP24.43■■□□□ 1.5
FN1-208ENST00000426059 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
FN1-208ENST00000426059 NBPF1Q3BBV0 1214 aa24.43■■□□□ 1.5
FN1-208ENST00000426059 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
FN1-208ENST00000426059 USP47Q96K76 1375 aa24.42■■□□□ 1.5
FN1-208ENST00000426059 ROCK2O75116 1388 aaKnown RBP24.41■■□□□ 1.5
FN1-208ENST00000426059 KIF1BO60333 1816 aa24.4■■□□□ 1.5
FN1-208ENST00000426059 ZC3H13Q5T200 1668 aaKnown RBP24.4■■□□□ 1.5
FN1-208ENST00000426059 WASHC2AQ641Q2 1341 aa24.4■■□□□ 1.5
FN1-208ENST00000426059 TRPM1Q7Z4N2 1603 aa24.4■■□□□ 1.5
FN1-208ENST00000426059 AGLP35573 1532 aa24.39■■□□□ 1.49
FN1-208ENST00000426059 MROH2AA6NES4 1674 aa24.39■■□□□ 1.49
FN1-208ENST00000426059 CNTLNQ9NXG0 1405 aa24.36■■□□□ 1.49
FN1-208ENST00000426059 FBXO31Q5XUX0 539 aaPredicted RBP24.36■■□□□ 1.49
FN1-208ENST00000426059 NOS1P29475 1434 aa24.35■■□□□ 1.49
FN1-208ENST00000426059 SYNMO15061 1565 aa24.35■■□□□ 1.49
FN1-208ENST00000426059 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
FN1-208ENST00000426059 ARHGAP31Q2M1Z3 1444 aa24.34■■□□□ 1.49
FN1-208ENST00000426059 CLTCQ00610 1675 aaKnown RBP24.33■■□□□ 1.49
FN1-208ENST00000426059 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
FN1-208ENST00000426059 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
FN1-208ENST00000426059 PREX1Q8TCU6 1659 aa24.3■■□□□ 1.48
FN1-208ENST00000426059 IDI1Q13907 227 aa24.3■■□□□ 1.48
FN1-208ENST00000426059 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
FN1-208ENST00000426059 ADGRF5Q8IZF2 1346 aa24.29■■□□□ 1.48
FN1-208ENST00000426059 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
FN1-208ENST00000426059 KIF7Q2M1P5 1343 aa24.28■■□□□ 1.48
FN1-208ENST00000426059 NEURL4Q96JN8 1562 aa24.28■■□□□ 1.48
FN1-208ENST00000426059 PIK3C2BO00750 1634 aa24.27■■□□□ 1.48
FN1-208ENST00000426059 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
FN1-208ENST00000426059 NUTM2DQ5VT03 806 aaPredicted RBP24.25■■□□□ 1.47
FN1-208ENST00000426059 PPP6R1Q9UPN7 881 aa24.25■■□□□ 1.47
FN1-208ENST00000426059 GPRASP1Q5JY77 1395 aa24.25■■□□□ 1.47
FN1-208ENST00000426059 IFT172Q9UG01 1749 aa24.25■■□□□ 1.47
FN1-208ENST00000426059 ESF1Q9H501 851 aaKnown RBP24.23■■□□□ 1.47
FN1-208ENST00000426059 CFAP70Q5T0N1 1121 aa24.22■■□□□ 1.47
FN1-208ENST00000426059 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms