RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 STRCQ7RTU9 1775 aa27.04■■□□□ 1.92
SLC6A1-202ENST00000425938 PTPRKQ15262 1439 aa27.03■■□□□ 1.92
SLC6A1-202ENST00000425938 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
SLC6A1-202ENST00000425938 EIF2AK4Q9P2K8 1649 aaKnown RBP27.02■■□□□ 1.92
SLC6A1-202ENST00000425938 FBXO41Q8TF61 875 aa27.02■■□□□ 1.92
SLC6A1-202ENST00000425938 DUOX2Q9NRD8 1548 aa27.01■■□□□ 1.91
SLC6A1-202ENST00000425938 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
SLC6A1-202ENST00000425938 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
SLC6A1-202ENST00000425938 WASHC2CQ9Y4E1 1318 aa26.99■■□□□ 1.91
SLC6A1-202ENST00000425938 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
SLC6A1-202ENST00000425938 RNF17Q9BXT8 1623 aaKnown RBP26.98■■□□□ 1.91
SLC6A1-202ENST00000425938 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
SLC6A1-202ENST00000425938 MYO3AQ8NEV4 1616 aa26.95■■□□□ 1.91
SLC6A1-202ENST00000425938 ANKRD30AQ9BXX3 1397 aa26.95■■□□□ 1.9
SLC6A1-202ENST00000425938 PTPRTO14522 1441 aa26.94■■□□□ 1.9
SLC6A1-202ENST00000425938 NCOA1Q15788 1441 aa26.94■■□□□ 1.9
SLC6A1-202ENST00000425938 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
SLC6A1-202ENST00000425938 ZNF142P52746 1687 aaPredicted RBP26.92■■□□□ 1.9
SLC6A1-202ENST00000425938 ERBINQ96RT1 1412 aa26.92■■□□□ 1.9
SLC6A1-202ENST00000425938 CAMSAP1Q5T5Y3 1602 aa26.92■■□□□ 1.9
SLC6A1-202ENST00000425938 CERKQ8TCT0 537 aa26.91■■□□□ 1.9
SLC6A1-202ENST00000425938 ZC3H13Q5T200 1668 aaKnown RBP26.91■■□□□ 1.9
SLC6A1-202ENST00000425938 CEP170BQ9Y4F5 1589 aaPredicted RBP26.9■■□□□ 1.9
SLC6A1-202ENST00000425938 PZPP20742 1482 aa26.9■■□□□ 1.9
SLC6A1-202ENST00000425938 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.9
SLC6A1-202ENST00000425938 ABCC3O15438 1527 aa26.87■■□□□ 1.89
SLC6A1-202ENST00000425938 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
SLC6A1-202ENST00000425938 FBXO31Q5XUX0 539 aaPredicted RBP26.86■■□□□ 1.89
SLC6A1-202ENST00000425938 ADGRL2O95490 1459 aa26.86■■□□□ 1.89
SLC6A1-202ENST00000425938 TNRQ92752 1358 aa26.85■■□□□ 1.89
SLC6A1-202ENST00000425938 A2ML1A8K2U0 1454 aa26.85■■□□□ 1.89
SLC6A1-202ENST00000425938 PLA2R1Q13018 1463 aa26.85■■□□□ 1.89
SLC6A1-202ENST00000425938 CEP152O94986 1710 aa26.84■■□□□ 1.89
SLC6A1-202ENST00000425938 PRDM15P57071 1507 aaPredicted RBP26.82■■□□□ 1.88
SLC6A1-202ENST00000425938 PKD2Q13563 968 aa26.82■■□□□ 1.88
SLC6A1-202ENST00000425938 NCKAP5LQ9HCH0 1330 aa26.81■■□□□ 1.88
SLC6A1-202ENST00000425938 DEPDC5O75140 1603 aa26.8■■□□□ 1.88
SLC6A1-202ENST00000425938 KANK1Q14678 1352 aa26.79■■□□□ 1.88
SLC6A1-202ENST00000425938 CFAP65Q6ZU64 1925 aaKnown RBP26.78■■□□□ 1.88
SLC6A1-202ENST00000425938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.78■■□□□ 1.88
SLC6A1-202ENST00000425938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.76■■□□□ 1.87
SLC6A1-202ENST00000425938 NLRP1Q9C000 1473 aa26.75■■□□□ 1.87
SLC6A1-202ENST00000425938 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
SLC6A1-202ENST00000425938 SPATA31D1Q6ZQQ2 1576 aa26.72■■□□□ 1.87
SLC6A1-202ENST00000425938 ROCK1Q13464 1354 aa26.71■■□□□ 1.87
SLC6A1-202ENST00000425938 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
SLC6A1-202ENST00000425938 LTBP4Q8N2S1 1624 aa26.71■■□□□ 1.87
SLC6A1-202ENST00000425938 ITGAEP38570 1179 aa26.7■■□□□ 1.86
SLC6A1-202ENST00000425938 THEMISQ8N1K5 641 aaPredicted RBP26.7■■□□□ 1.86
SLC6A1-202ENST00000425938 ARHGAP31Q2M1Z3 1444 aa26.7■■□□□ 1.86
SLC6A1-202ENST00000425938 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
SLC6A1-202ENST00000425938 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
SLC6A1-202ENST00000425938 LMTK2Q8IWU2 1503 aa26.66■■□□□ 1.86
SLC6A1-202ENST00000425938 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
SLC6A1-202ENST00000425938 POLR1AO95602 1720 aaPredicted RBP26.65■■□□□ 1.86
SLC6A1-202ENST00000425938 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
SLC6A1-202ENST00000425938 ZNF335Q9H4Z2 1342 aaPredicted RBP26.63■■□□□ 1.85
SLC6A1-202ENST00000425938 IQSEC2Q5JU85 1478 aa26.62■■□□□ 1.85
SLC6A1-202ENST00000425938 NEURL4Q96JN8 1562 aa26.6■■□□□ 1.85
SLC6A1-202ENST00000425938 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
SLC6A1-202ENST00000425938 UNC13BO14795 1591 aa26.58■■□□□ 1.85
SLC6A1-202ENST00000425938 MED14O60244 1454 aa26.55■■□□□ 1.84
SLC6A1-202ENST00000425938 TET3O43151 1660 aa26.54■■□□□ 1.84
SLC6A1-202ENST00000425938 UBR1Q8IWV7 1749 aa26.53■■□□□ 1.84
SLC6A1-202ENST00000425938 NPHP4O75161 1426 aaPredicted RBP26.52■■□□□ 1.84
SLC6A1-202ENST00000425938 RPRD2Q5VT52 1461 aaKnown RBP26.52■■□□□ 1.84
SLC6A1-202ENST00000425938 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
SLC6A1-202ENST00000425938 NOS1P29475 1434 aa26.48■■□□□ 1.83
SLC6A1-202ENST00000425938 PIK3C2BO00750 1634 aa26.48■■□□□ 1.83
SLC6A1-202ENST00000425938 IQGAP3Q86VI3 1631 aa26.48■■□□□ 1.83
SLC6A1-202ENST00000425938 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
SLC6A1-202ENST00000425938 SYNMO15061 1565 aa26.47■■□□□ 1.83
SLC6A1-202ENST00000425938 NUP155O75694 1391 aa26.46■■□□□ 1.83
SLC6A1-202ENST00000425938 IQGAP1P46940 1657 aa26.46■■□□□ 1.83
SLC6A1-202ENST00000425938 CPS1P31327 1500 aa26.44■■□□□ 1.82
SLC6A1-202ENST00000425938 KDM5AP29375 1690 aaKnown RBP26.44■■□□□ 1.82
SLC6A1-202ENST00000425938 IDI1Q13907 227 aa26.44■■□□□ 1.82
SLC6A1-202ENST00000425938 SLIT1O75093 1534 aa26.44■■□□□ 1.82
SLC6A1-202ENST00000425938 ARHGAP23Q9P227 1491 aa26.43■■□□□ 1.82
SLC6A1-202ENST00000425938 SLC52A1Q9NWF4 448 aa26.43■■□□□ 1.82
SLC6A1-202ENST00000425938 SCAF11Q99590 1463 aaKnown RBP26.42■■□□□ 1.82
SLC6A1-202ENST00000425938 E9PCH4 1651 aa26.41■■□□□ 1.82
SLC6A1-202ENST00000425938 TXNDC2Q86VQ3 553 aa26.41■■□□□ 1.82
SLC6A1-202ENST00000425938 NAIPQ13075 1403 aa26.4■■□□□ 1.82
SLC6A1-202ENST00000425938 UBAP1LF5GYI3 381 aa26.4■■□□□ 1.82
SLC6A1-202ENST00000425938 EID1Q9Y6B2 187 aa26.4■■□□□ 1.82
SLC6A1-202ENST00000425938 LTKP29376 864 aa26.39■■□□□ 1.82
SLC6A1-202ENST00000425938 TMEM2Q9UHN6 1383 aa26.38■■□□□ 1.81
SLC6A1-202ENST00000425938 ADGRB3O60242 1522 aa26.38■■□□□ 1.81
SLC6A1-202ENST00000425938 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
SLC6A1-202ENST00000425938 MYO5BQ9ULV0 1848 aa26.3■■□□□ 1.8
SLC6A1-202ENST00000425938 TOM1O60784 492 aa26.28■■□□□ 1.8
SLC6A1-202ENST00000425938 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
SLC6A1-202ENST00000425938 SPHKAPQ2M3C7 1700 aa26.26■■□□□ 1.79
SLC6A1-202ENST00000425938 TMEM131LA2VDJ0 1609 aa26.26■■□□□ 1.79
SLC6A1-202ENST00000425938 CHGAP10645 457 aaKnown RBP26.26■■□□□ 1.79
SLC6A1-202ENST00000425938 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
SLC6A1-202ENST00000425938 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
SLC6A1-202ENST00000425938 HDGFP51858 240 aaKnown RBP26.23■■□□□ 1.79
SLC6A1-202ENST00000425938 RIMS2Q9UQ26 1411 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms