RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 KIF15Q9NS87 1388 aa28.51■■■□□ 2.16
MSH5-207ENST00000425703 EIF2AK4Q9P2K8 1649 aaKnown RBP28.51■■■□□ 2.15
MSH5-207ENST00000425703 KDM5DQ9BY66 1539 aa28.51■■■□□ 2.15
MSH5-207ENST00000425703 WASHC2CQ9Y4E1 1318 aa28.49■■■□□ 2.15
MSH5-207ENST00000425703 PTPRKQ15262 1439 aa28.49■■■□□ 2.15
MSH5-207ENST00000425703 ANKRD30AQ9BXX3 1397 aa28.49■■■□□ 2.15
MSH5-207ENST00000425703 RNF17Q9BXT8 1623 aaKnown RBP28.48■■■□□ 2.15
MSH5-207ENST00000425703 FAM50AQ14320 339 aaKnown RBP28.48■■■□□ 2.15
MSH5-207ENST00000425703 ERBINQ96RT1 1412 aa28.48■■■□□ 2.15
MSH5-207ENST00000425703 RRP7BPQ9NSQ0 103 aa28.46■■■□□ 2.15
MSH5-207ENST00000425703 NCOA1Q15788 1441 aa28.44■■■□□ 2.14
MSH5-207ENST00000425703 ADGRL2O95490 1459 aa28.43■■■□□ 2.14
MSH5-207ENST00000425703 PZPP20742 1482 aa28.41■■■□□ 2.14
MSH5-207ENST00000425703 CHIC2Q9UKJ5 165 aa28.41■■■□□ 2.14
MSH5-207ENST00000425703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.39■■■□□ 2.14
MSH5-207ENST00000425703 MROH1Q8NDA8 1641 aa28.38■■■□□ 2.13
MSH5-207ENST00000425703 ABCC3O15438 1527 aa28.38■■■□□ 2.13
MSH5-207ENST00000425703 ZC3H13Q5T200 1668 aaKnown RBP28.37■■■□□ 2.13
MSH5-207ENST00000425703 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
MSH5-207ENST00000425703 PRDM15P57071 1507 aaPredicted RBP28.34■■■□□ 2.13
MSH5-207ENST00000425703 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
MSH5-207ENST00000425703 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
MSH5-207ENST00000425703 FBXO31Q5XUX0 539 aaPredicted RBP28.32■■■□□ 2.12
MSH5-207ENST00000425703 TNRQ92752 1358 aa28.32■■■□□ 2.12
MSH5-207ENST00000425703 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
MSH5-207ENST00000425703 DEPDC5O75140 1603 aa28.3■■■□□ 2.12
MSH5-207ENST00000425703 CEP170BQ9Y4F5 1589 aaPredicted RBP28.3■■■□□ 2.12
MSH5-207ENST00000425703 ROCK1Q13464 1354 aa28.29■■■□□ 2.12
MSH5-207ENST00000425703 A2ML1A8K2U0 1454 aa28.28■■■□□ 2.12
MSH5-207ENST00000425703 KANK1Q14678 1352 aa28.28■■■□□ 2.12
MSH5-207ENST00000425703 ANKRD50Q9ULJ7 1429 aa28.27■■■□□ 2.12
MSH5-207ENST00000425703 STRCQ7RTU9 1775 aa28.27■■■□□ 2.12
MSH5-207ENST00000425703 ARHGAP31Q2M1Z3 1444 aa28.26■■■□□ 2.12
MSH5-207ENST00000425703 PLA2R1Q13018 1463 aa28.25■■■□□ 2.11
MSH5-207ENST00000425703 RRBP1Q9P2E9 1410 aaKnown RBP28.25■■■□□ 2.11
MSH5-207ENST00000425703 NLRP1Q9C000 1473 aa28.24■■■□□ 2.11
MSH5-207ENST00000425703 CAMSAP1Q5T5Y3 1602 aa28.24■■■□□ 2.11
MSH5-207ENST00000425703 PTPRTO14522 1441 aa28.24■■■□□ 2.11
MSH5-207ENST00000425703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.23■■■□□ 2.117e-8■■□□□ 14
MSH5-207ENST00000425703 SPATA31D1Q6ZQQ2 1576 aa28.23■■■□□ 2.11
MSH5-207ENST00000425703 LMTK2Q8IWU2 1503 aa28.22■■■□□ 2.11
MSH5-207ENST00000425703 VWDEQ8N2E2 1590 aa28.21■■■□□ 2.11
MSH5-207ENST00000425703 ERVK-7P63135 1459 aa28.21■■■□□ 2.11
MSH5-207ENST00000425703 PKD2Q13563 968 aa28.2■■■□□ 2.1
MSH5-207ENST00000425703 CEP152O94986 1710 aa28.2■■■□□ 2.1
MSH5-207ENST00000425703 ITGAEP38570 1179 aa28.14■■■□□ 2.1
MSH5-207ENST00000425703 THEMISQ8N1K5 641 aaPredicted RBP28.14■■■□□ 2.1
MSH5-207ENST00000425703 NCKAP5LQ9HCH0 1330 aa28.11■■■□□ 2.09
MSH5-207ENST00000425703 UGGT1Q9NYU2 1555 aa28.11■■■□□ 2.09
MSH5-207ENST00000425703 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.08
MSH5-207ENST00000425703 UNC13BO14795 1591 aa28.07■■■□□ 2.08
MSH5-207ENST00000425703 ILDR1Q86SU0 546 aaPredicted RBP28.06■■■□□ 2.08
MSH5-207ENST00000425703 RPRD2Q5VT52 1461 aaKnown RBP28.05■■■□□ 2.08
MSH5-207ENST00000425703 ANKLE2Q86XL3 938 aa28.04■■■□□ 2.08
MSH5-207ENST00000425703 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
MSH5-207ENST00000425703 NOS1P29475 1434 aa28.02■■■□□ 2.08
MSH5-207ENST00000425703 FBXO41Q8TF61 875 aa28.02■■■□□ 2.08
MSH5-207ENST00000425703 TET3O43151 1660 aa27.99■■■□□ 2.07
MSH5-207ENST00000425703 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
MSH5-207ENST00000425703 SLC52A1Q9NWF4 448 aa27.97■■■□□ 2.07
MSH5-207ENST00000425703 NUP155O75694 1391 aa27.97■■■□□ 2.07
MSH5-207ENST00000425703 MED14O60244 1454 aa27.96■■■□□ 2.07
MSH5-207ENST00000425703 NEURL4Q96JN8 1562 aa27.96■■■□□ 2.07
MSH5-207ENST00000425703 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
MSH5-207ENST00000425703 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.06
MSH5-207ENST00000425703 UBR1Q8IWV7 1749 aa27.95■■■□□ 2.06
MSH5-207ENST00000425703 NAIPQ13075 1403 aa27.94■■■□□ 2.06
MSH5-207ENST00000425703 LTBP4Q8N2S1 1624 aa27.94■■■□□ 2.06
MSH5-207ENST00000425703 IDI1Q13907 227 aa27.94■■■□□ 2.06
MSH5-207ENST00000425703 SYNMO15061 1565 aa27.94■■■□□ 2.06
MSH5-207ENST00000425703 GCC2Q8IWJ2 1684 aa27.93■■■□□ 2.06
MSH5-207ENST00000425703 ARHGAP23Q9P227 1491 aa27.92■■■□□ 2.06
MSH5-207ENST00000425703 SLIT1O75093 1534 aa27.92■■■□□ 2.06
MSH5-207ENST00000425703 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
MSH5-207ENST00000425703 NPHP4O75161 1426 aaPredicted RBP27.91■■■□□ 2.06
MSH5-207ENST00000425703 KDM5AP29375 1690 aaKnown RBP27.91■■■□□ 2.06
MSH5-207ENST00000425703 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
MSH5-207ENST00000425703 STAG3Q9UJ98 1225 aa27.89■■■□□ 2.06
MSH5-207ENST00000425703 ZNF335Q9H4Z2 1342 aaPredicted RBP27.89■■■□□ 2.05
MSH5-207ENST00000425703 TMEM2Q9UHN6 1383 aa27.87■■■□□ 2.05
MSH5-207ENST00000425703 SCAF11Q99590 1463 aaKnown RBP27.87■■■□□ 2.05
MSH5-207ENST00000425703 IQSEC2Q5JU85 1478 aa27.86■■■□□ 2.05
MSH5-207ENST00000425703 EID1Q9Y6B2 187 aa27.85■■■□□ 2.05
MSH5-207ENST00000425703 TXNDC2Q86VQ3 553 aa27.84■■■□□ 2.05
MSH5-207ENST00000425703 E9PCH4 1651 aa27.84■■■□□ 2.05
MSH5-207ENST00000425703 ADGRB3O60242 1522 aa27.83■■■□□ 2.05
MSH5-207ENST00000425703 LTKP29376 864 aa27.83■■■□□ 2.05
MSH5-207ENST00000425703 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
MSH5-207ENST00000425703 CPS1P31327 1500 aa27.76■■■□□ 2.03
MSH5-207ENST00000425703 HDGFP51858 240 aaKnown RBP27.72■■■□□ 2.03
MSH5-207ENST00000425703 TMEM131LA2VDJ0 1609 aa27.71■■■□□ 2.03
MSH5-207ENST00000425703 TRIM52Q96A61 297 aa27.7■■■□□ 2.02
MSH5-207ENST00000425703 ZFYVE9O95405 1425 aa27.69■■■□□ 2.02
MSH5-207ENST00000425703 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
MSH5-207ENST00000425703 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.66■■■□□ 2.02
MSH5-207ENST00000425703 RIMS2Q9UQ26 1411 aa27.66■■■□□ 2.02
MSH5-207ENST00000425703 SPHKAPQ2M3C7 1700 aa27.64■■■□□ 2.02
MSH5-207ENST00000425703 CHGAP10645 457 aaKnown RBP27.64■■■□□ 2.02
MSH5-207ENST00000425703 SLC4A1APQ9BWU0 796 aaKnown RBP27.64■■■□□ 2.02
MSH5-207ENST00000425703 TRPM2O94759 1503 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms