RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 NPHP4O75161 1426 aaPredicted RBP16■□□□□ 0.15
SMIM27-201ENST00000425533 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
SMIM27-201ENST00000425533 EEA1Q15075 1411 aa15.98■□□□□ 0.15
SMIM27-201ENST00000425533 TNRQ92752 1358 aa15.98■□□□□ 0.15
SMIM27-201ENST00000425533 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMIM27-201ENST00000425533 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
SMIM27-201ENST00000425533 ADGBQ8N7X0 1667 aa15.97■□□□□ 0.15
SMIM27-201ENST00000425533 FBXO31Q5XUX0 539 aaPredicted RBP15.96■□□□□ 0.15
SMIM27-201ENST00000425533 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
SMIM27-201ENST00000425533 UGGT1Q9NYU2 1555 aa15.94■□□□□ 0.14
SMIM27-201ENST00000425533 THEMISQ8N1K5 641 aaPredicted RBP15.93■□□□□ 0.14
SMIM27-201ENST00000425533 PZPP20742 1482 aa15.92■□□□□ 0.14
SMIM27-201ENST00000425533 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
SMIM27-201ENST00000425533 FAM135AQ9P2D6 1515 aa15.91■□□□□ 0.14
SMIM27-201ENST00000425533 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
SMIM27-201ENST00000425533 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
SMIM27-201ENST00000425533 GPATCH8Q9UKJ3 1502 aaKnown RBP15.9■□□□□ 0.14
SMIM27-201ENST00000425533 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
SMIM27-201ENST00000425533 KIAA1107Q9UPP5 1409 aa15.9■□□□□ 0.14
SMIM27-201ENST00000425533 KDM5DQ9BY66 1539 aa15.89■□□□□ 0.13
SMIM27-201ENST00000425533 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
SMIM27-201ENST00000425533 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
SMIM27-201ENST00000425533 UPF1Q92900 1129 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMIM27-201ENST00000425533 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
SMIM27-201ENST00000425533 ROBO1Q9Y6N7 1651 aa15.84■□□□□ 0.13
SMIM27-201ENST00000425533 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
SMIM27-201ENST00000425533 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
SMIM27-201ENST00000425533 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
SMIM27-201ENST00000425533 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
SMIM27-201ENST00000425533 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
SMIM27-201ENST00000425533 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
SMIM27-201ENST00000425533 KIF3BO15066 747 aa15.8■□□□□ 0.12
SMIM27-201ENST00000425533 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
SMIM27-201ENST00000425533 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.12
SMIM27-201ENST00000425533 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.12
SMIM27-201ENST00000425533 SCAF11Q99590 1463 aaKnown RBP15.76■□□□□ 0.11
SMIM27-201ENST00000425533 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
SMIM27-201ENST00000425533 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
SMIM27-201ENST00000425533 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
SMIM27-201ENST00000425533 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
SMIM27-201ENST00000425533 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
SMIM27-201ENST00000425533 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
SMIM27-201ENST00000425533 MAP3K1Q13233 1512 aa15.72■□□□□ 0.11
SMIM27-201ENST00000425533 TMEM94Q12767 1356 aa15.72■□□□□ 0.11
SMIM27-201ENST00000425533 LTKP29376 864 aa15.71■□□□□ 0.11
SMIM27-201ENST00000425533 JCADQ9P266 1359 aa15.71■□□□□ 0.11
SMIM27-201ENST00000425533 ERVK-7P63135 1459 aa15.71■□□□□ 0.1
SMIM27-201ENST00000425533 NCOA2Q15596 1464 aa15.71■□□□□ 0.1
SMIM27-201ENST00000425533 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
SMIM27-201ENST00000425533 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.1
SMIM27-201ENST00000425533 SLIT1O75093 1534 aa15.7■□□□□ 0.1
SMIM27-201ENST00000425533 LRP6O75581 1613 aa15.7■□□□□ 0.1
SMIM27-201ENST00000425533 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
SMIM27-201ENST00000425533 ABCC3O15438 1527 aa15.68■□□□□ 0.1
SMIM27-201ENST00000425533 ZNF772Q68DY9 489 aaPredicted RBP15.68■□□□□ 0.1
SMIM27-201ENST00000425533 TXNDC2Q86VQ3 553 aa15.68■□□□□ 0.1
SMIM27-201ENST00000425533 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
SMIM27-201ENST00000425533 RBM33Q96EV2 1170 aaKnown RBP15.66■□□□□ 0.1
SMIM27-201ENST00000425533 CCDC141Q6ZP82 1450 aa15.65■□□□□ 0.1
SMIM27-201ENST00000425533 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
SMIM27-201ENST00000425533 MEX3CQ5U5Q3 659 aaKnown RBP15.64■□□□□ 0.09
SMIM27-201ENST00000425533 CDK12Q9NYV4 1490 aaPredicted RBP15.64■□□□□ 0.09
SMIM27-201ENST00000425533 CEP152O94986 1710 aa15.63■□□□□ 0.09
SMIM27-201ENST00000425533 RXRBP28702 533 aa15.63■□□□□ 0.09
SMIM27-201ENST00000425533 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
SMIM27-201ENST00000425533 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
SMIM27-201ENST00000425533 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
SMIM27-201ENST00000425533 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
SMIM27-201ENST00000425533 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
SMIM27-201ENST00000425533 KCNA6P17658 529 aa15.61■□□□□ 0.09
SMIM27-201ENST00000425533 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
SMIM27-201ENST00000425533 SHPRHQ149N8 1683 aa15.6■□□□□ 0.09
SMIM27-201ENST00000425533 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
SMIM27-201ENST00000425533 MSH6P52701 1360 aa15.6■□□□□ 0.09
SMIM27-201ENST00000425533 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
SMIM27-201ENST00000425533 NKTRP30414 1462 aaKnown RBP15.59■□□□□ 0.09
SMIM27-201ENST00000425533 NWD1Q149M9 1564 aa15.59■□□□□ 0.09
SMIM27-201ENST00000425533 PIK3C2BO00750 1634 aa15.59■□□□□ 0.09
SMIM27-201ENST00000425533 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
SMIM27-201ENST00000425533 TET3O43151 1660 aa15.58■□□□□ 0.08
SMIM27-201ENST00000425533 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.08
SMIM27-201ENST00000425533 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
SMIM27-201ENST00000425533 SLC26A8Q96RN1 970 aa15.56■□□□□ 0.08
SMIM27-201ENST00000425533 KDM5AP29375 1690 aaKnown RBP15.56■□□□□ 0.08
SMIM27-201ENST00000425533 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
SMIM27-201ENST00000425533 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
SMIM27-201ENST00000425533 RGS12O14924 1447 aa15.54■□□□□ 0.08
SMIM27-201ENST00000425533 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
SMIM27-201ENST00000425533 AHDC1Q5TGY3 1603 aaPredicted RBP15.54■□□□□ 0.08
SMIM27-201ENST00000425533 CEP162Q5TB80 1403 aa15.52■□□□□ 0.08
SMIM27-201ENST00000425533 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
SMIM27-201ENST00000425533 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.07
SMIM27-201ENST00000425533 DIP2AQ14689 1571 aa15.5■□□□□ 0.07
SMIM27-201ENST00000425533 AFF2P51816 1311 aa15.5■□□□□ 0.07
SMIM27-201ENST00000425533 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
SMIM27-201ENST00000425533 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
SMIM27-201ENST00000425533 ARHGAP31Q2M1Z3 1444 aa15.5■□□□□ 0.07
SMIM27-201ENST00000425533 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
SMIM27-201ENST00000425533 NUTM2BA6NNL0 878 aaPredicted RBP15.49■□□□□ 0.07
SMIM27-201ENST00000425533 NUTM2EB1AL46 878 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms