RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB3-203ENST00000425319 PLXNC1O60486 1568 aa19.37■□□□□ 0.69
HLA-DQB3-203ENST00000425319 ADGBQ8N7X0 1667 aa19.36■□□□□ 0.69
HLA-DQB3-203ENST00000425319 CEP170BQ9Y4F5 1589 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB3-203ENST00000425319 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB3-203ENST00000425319 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
HLA-DQB3-203ENST00000425319 PIP4K2BP78356 416 aa19.35■□□□□ 0.69
HLA-DQB3-203ENST00000425319 APLP2Q06481 763 aa19.33■□□□□ 0.68
HLA-DQB3-203ENST00000425319 MIA2Q96PC5 1412 aa19.32■□□□□ 0.68
HLA-DQB3-203ENST00000425319 MYO3AQ8NEV4 1616 aa19.32■□□□□ 0.68
HLA-DQB3-203ENST00000425319 TIAM1Q13009 1591 aa19.32■□□□□ 0.68
HLA-DQB3-203ENST00000425319 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
HLA-DQB3-203ENST00000425319 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
HLA-DQB3-203ENST00000425319 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
HLA-DQB3-203ENST00000425319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.29■□□□□ 0.68
HLA-DQB3-203ENST00000425319 PZPP20742 1482 aa19.28■□□□□ 0.68
HLA-DQB3-203ENST00000425319 ZNF142P52746 1687 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB3-203ENST00000425319 KDM5DQ9BY66 1539 aa19.28■□□□□ 0.68
HLA-DQB3-203ENST00000425319 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
HLA-DQB3-203ENST00000425319 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
HLA-DQB3-203ENST00000425319 CPS1P31327 1500 aa19.26■□□□□ 0.67
HLA-DQB3-203ENST00000425319 SHANK2Q9UPX8 1470 aa19.26■□□□□ 0.67
HLA-DQB3-203ENST00000425319 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
HLA-DQB3-203ENST00000425319 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
HLA-DQB3-203ENST00000425319 HSPA1LP34931 641 aa19.24■□□□□ 0.67
HLA-DQB3-203ENST00000425319 STAG3Q9UJ98 1225 aa19.23■□□□□ 0.67
HLA-DQB3-203ENST00000425319 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
HLA-DQB3-203ENST00000425319 NPHP4O75161 1426 aaPredicted RBP19.23■□□□□ 0.67
HLA-DQB3-203ENST00000425319 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
HLA-DQB3-203ENST00000425319 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
HLA-DQB3-203ENST00000425319 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
HLA-DQB3-203ENST00000425319 MYOM3Q5VTT5 1437 aa19.17■□□□□ 0.66
HLA-DQB3-203ENST00000425319 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
HLA-DQB3-203ENST00000425319 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
HLA-DQB3-203ENST00000425319 KANK1Q14678 1352 aa19.17■□□□□ 0.66
HLA-DQB3-203ENST00000425319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
HLA-DQB3-203ENST00000425319 MED14O60244 1454 aa19.16■□□□□ 0.66
HLA-DQB3-203ENST00000425319 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
HLA-DQB3-203ENST00000425319 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.65
HLA-DQB3-203ENST00000425319 KANK4Q5T7N3 995 aaPredicted RBP19.13■□□□□ 0.65
HLA-DQB3-203ENST00000425319 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB3-203ENST00000425319 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
HLA-DQB3-203ENST00000425319 POLR1AO95602 1720 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB3-203ENST00000425319 DEPDC5O75140 1603 aa19.09■□□□□ 0.65
HLA-DQB3-203ENST00000425319 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
HLA-DQB3-203ENST00000425319 BCANQ96GW7 911 aa19.08■□□□□ 0.64
HLA-DQB3-203ENST00000425319 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.64
HLA-DQB3-203ENST00000425319 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
HLA-DQB3-203ENST00000425319 NEURL4Q96JN8 1562 aa19.07■□□□□ 0.64
HLA-DQB3-203ENST00000425319 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ABCC3O15438 1527 aa19.07■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
HLA-DQB3-203ENST00000425319 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB3-203ENST00000425319 LTKP29376 864 aa19.04■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
HLA-DQB3-203ENST00000425319 EIF2AK4Q9P2K8 1649 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB3-203ENST00000425319 VWDEQ8N2E2 1590 aa19.03■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ARHGAP31Q2M1Z3 1444 aa19.03■□□□□ 0.64
HLA-DQB3-203ENST00000425319 ERBINQ96RT1 1412 aa19.02■□□□□ 0.64
HLA-DQB3-203ENST00000425319 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.64
HLA-DQB3-203ENST00000425319 RNF17Q9BXT8 1623 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB3-203ENST00000425319 IQGAP1P46940 1657 aa19.01■□□□□ 0.63
HLA-DQB3-203ENST00000425319 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
HLA-DQB3-203ENST00000425319 PROSER2Q86WR7 435 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB3-203ENST00000425319 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
HLA-DQB3-203ENST00000425319 KCNA6P17658 529 aa18.99■□□□□ 0.63
HLA-DQB3-203ENST00000425319 MED1Q15648 1581 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB3-203ENST00000425319 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
HLA-DQB3-203ENST00000425319 IDI1Q13907 227 aa18.98■□□□□ 0.63
HLA-DQB3-203ENST00000425319 ABCC5O15440 1437 aa18.98■□□□□ 0.63
HLA-DQB3-203ENST00000425319 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB3-203ENST00000425319 DAPK1P53355 1430 aa18.94■□□□□ 0.62
HLA-DQB3-203ENST00000425319 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB3-203ENST00000425319 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
HLA-DQB3-203ENST00000425319 SLIT1O75093 1534 aa18.94■□□□□ 0.62
HLA-DQB3-203ENST00000425319 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
HLA-DQB3-203ENST00000425319 SYNMO15061 1565 aa18.93■□□□□ 0.62
HLA-DQB3-203ENST00000425319 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
HLA-DQB3-203ENST00000425319 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.9■□□□□ 0.62
HLA-DQB3-203ENST00000425319 TMEM94Q12767 1356 aa18.9■□□□□ 0.62
HLA-DQB3-203ENST00000425319 FGD6Q6ZV73 1430 aa18.9■□□□□ 0.62
HLA-DQB3-203ENST00000425319 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB3-203ENST00000425319 PTPN23Q9H3S7 1636 aa18.89■□□□□ 0.61
HLA-DQB3-203ENST00000425319 UBR1Q8IWV7 1749 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 MSH6P52701 1360 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 EFCAB6Q5THR3 1501 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 MROH1Q8NDA8 1641 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 CEP152O94986 1710 aa18.88■□□□□ 0.61
HLA-DQB3-203ENST00000425319 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB3-203ENST00000425319 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
HLA-DQB3-203ENST00000425319 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
HLA-DQB3-203ENST00000425319 RBM33Q96EV2 1170 aaKnown RBP18.82■□□□□ 0.6
HLA-DQB3-203ENST00000425319 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
HLA-DQB3-203ENST00000425319 ANKRD50Q9ULJ7 1429 aa18.82■□□□□ 0.6
HLA-DQB3-203ENST00000425319 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
HLA-DQB3-203ENST00000425319 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
HLA-DQB3-203ENST00000425319 NOS1P29475 1434 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms