RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
ATG4B-209ENST00000425239 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
ATG4B-209ENST00000425239 LRRC9Q6ZRR7 1453 aa23.96■■□□□ 1.43
ATG4B-209ENST00000425239 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
ATG4B-209ENST00000425239 FAM135AQ9P2D6 1515 aa23.95■■□□□ 1.43
ATG4B-209ENST00000425239 PZPP20742 1482 aa23.95■■□□□ 1.42
ATG4B-209ENST00000425239 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
ATG4B-209ENST00000425239 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
ATG4B-209ENST00000425239 KANK4Q5T7N3 995 aaPredicted RBP23.93■■□□□ 1.42
ATG4B-209ENST00000425239 TNRQ92752 1358 aa23.92■■□□□ 1.42
ATG4B-209ENST00000425239 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
ATG4B-209ENST00000425239 DISP3Q9P2K9 1392 aa23.91■■□□□ 1.42
ATG4B-209ENST00000425239 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
ATG4B-209ENST00000425239 TSPY4P0CV99 314 aa23.9■■□□□ 1.42
ATG4B-209ENST00000425239 TSPY10P0CW01 314 aa23.9■■□□□ 1.42
ATG4B-209ENST00000425239 MIA2Q96PC5 1412 aa23.89■■□□□ 1.41
ATG4B-209ENST00000425239 MAST1Q9Y2H9 1570 aa23.88■■□□□ 1.41
ATG4B-209ENST00000425239 MAP3K1Q13233 1512 aa23.88■■□□□ 1.41
ATG4B-209ENST00000425239 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
ATG4B-209ENST00000425239 POLR1AO95602 1720 aaPredicted RBP23.84■■□□□ 1.41
ATG4B-209ENST00000425239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.84■■□□□ 1.415e-9■■■■□ 24.7
ATG4B-209ENST00000425239 UBAP1LF5GYI3 381 aa23.84■■□□□ 1.41
ATG4B-209ENST00000425239 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
ATG4B-209ENST00000425239 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
ATG4B-209ENST00000425239 ABCC3O15438 1527 aa23.81■■□□□ 1.4
ATG4B-209ENST00000425239 THEMISQ8N1K5 641 aaPredicted RBP23.81■■□□□ 1.4
ATG4B-209ENST00000425239 MED14O60244 1454 aa23.81■■□□□ 1.4
ATG4B-209ENST00000425239 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
ATG4B-209ENST00000425239 ANKLE2Q86XL3 938 aa23.8■■□□□ 1.4
ATG4B-209ENST00000425239 SHANK2Q9UPX8 1470 aa23.8■■□□□ 1.4
ATG4B-209ENST00000425239 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
ATG4B-209ENST00000425239 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
ATG4B-209ENST00000425239 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
ATG4B-209ENST00000425239 VWDEQ8N2E2 1590 aa23.78■■□□□ 1.4
ATG4B-209ENST00000425239 SOCS7O14512 581 aa23.77■■□□□ 1.4
ATG4B-209ENST00000425239 DEPDC5O75140 1603 aa23.77■■□□□ 1.4
ATG4B-209ENST00000425239 ZC3H13Q5T200 1668 aaKnown RBP23.76■■□□□ 1.39
ATG4B-209ENST00000425239 CPS1P31327 1500 aa23.75■■□□□ 1.39
ATG4B-209ENST00000425239 NPHP4O75161 1426 aaPredicted RBP23.73■■□□□ 1.39
ATG4B-209ENST00000425239 ERVK-7P63135 1459 aa23.73■■□□□ 1.39
ATG4B-209ENST00000425239 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
ATG4B-209ENST00000425239 ABCC5O15440 1437 aa23.71■■□□□ 1.39
ATG4B-209ENST00000425239 ALKQ9UM73 1620 aa23.7■■□□□ 1.39
ATG4B-209ENST00000425239 CEP152O94986 1710 aa23.69■■□□□ 1.38
ATG4B-209ENST00000425239 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
ATG4B-209ENST00000425239 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
ATG4B-209ENST00000425239 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
ATG4B-209ENST00000425239 HSPA1LP34931 641 aa23.66■■□□□ 1.38
ATG4B-209ENST00000425239 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
ATG4B-209ENST00000425239 UBR1Q8IWV7 1749 aa23.65■■□□□ 1.38
ATG4B-209ENST00000425239 TOM1O60784 492 aa23.65■■□□□ 1.38
ATG4B-209ENST00000425239 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
ATG4B-209ENST00000425239 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
ATG4B-209ENST00000425239 CROCC2H7BZ55 1655 aa23.64■■□□□ 1.37
ATG4B-209ENST00000425239 RRP7BPQ9NSQ0 103 aa23.63■■□□□ 1.37
ATG4B-209ENST00000425239 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
ATG4B-209ENST00000425239 ERBINQ96RT1 1412 aa23.62■■□□□ 1.37
ATG4B-209ENST00000425239 LTKP29376 864 aa23.62■■□□□ 1.37
ATG4B-209ENST00000425239 PIP4K2BP78356 416 aa23.62■■□□□ 1.37
ATG4B-209ENST00000425239 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
ATG4B-209ENST00000425239 LRRC7Q96NW7 1537 aa23.61■■□□□ 1.37
ATG4B-209ENST00000425239 DAPK1P53355 1430 aa23.6■■□□□ 1.37
ATG4B-209ENST00000425239 SLIT1O75093 1534 aa23.59■■□□□ 1.37
ATG4B-209ENST00000425239 FGD6Q6ZV73 1430 aa23.58■■□□□ 1.36
ATG4B-209ENST00000425239 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
ATG4B-209ENST00000425239 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
ATG4B-209ENST00000425239 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
ATG4B-209ENST00000425239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.53■■□□□ 1.361e-13■□□□□ 10.9
ATG4B-209ENST00000425239 LMTK2Q8IWU2 1503 aa23.53■■□□□ 1.36
ATG4B-209ENST00000425239 PIK3C2BO00750 1634 aa23.51■■□□□ 1.35
ATG4B-209ENST00000425239 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
ATG4B-209ENST00000425239 SYNMO15061 1565 aa23.5■■□□□ 1.35
ATG4B-209ENST00000425239 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
ATG4B-209ENST00000425239 APLP2Q06481 763 aa23.5■■□□□ 1.35
ATG4B-209ENST00000425239 IDI1Q13907 227 aa23.49■■□□□ 1.35
ATG4B-209ENST00000425239 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
ATG4B-209ENST00000425239 XIRP1Q702N8 1843 aaKnown RBP23.48■■□□□ 1.35
ATG4B-209ENST00000425239 ANKRD30AQ9BXX3 1397 aa23.48■■□□□ 1.35
ATG4B-209ENST00000425239 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
ATG4B-209ENST00000425239 NOS1P29475 1434 aa23.46■■□□□ 1.35
ATG4B-209ENST00000425239 ADGRL2O95490 1459 aa23.45■■□□□ 1.34
ATG4B-209ENST00000425239 KANK1Q14678 1352 aa23.45■■□□□ 1.34
ATG4B-209ENST00000425239 TET3O43151 1660 aa23.44■■□□□ 1.34
ATG4B-209ENST00000425239 EID1Q9Y6B2 187 aa23.43■■□□□ 1.34
ATG4B-209ENST00000425239 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
ATG4B-209ENST00000425239 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
ATG4B-209ENST00000425239 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
ATG4B-209ENST00000425239 KCNA6P17658 529 aa23.35■■□□□ 1.33
ATG4B-209ENST00000425239 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
ATG4B-209ENST00000425239 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
ATG4B-209ENST00000425239 ADGRB3O60242 1522 aa23.33■■□□□ 1.33
ATG4B-209ENST00000425239 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.32
ATG4B-209ENST00000425239 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
ATG4B-209ENST00000425239 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
ATG4B-209ENST00000425239 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
ATG4B-209ENST00000425239 FAM50AQ14320 339 aaKnown RBP23.31■■□□□ 1.32
ATG4B-209ENST00000425239 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
ATG4B-209ENST00000425239 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
ATG4B-209ENST00000425239 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
ATG4B-209ENST00000425239 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms