RNA–Protein interactions for RNA: ENST00000425174.1

HLA-S-202, Transcript of major histocompatibility complex, class I, S (pseudogene), humanhuman

BASIC

Gene HLA-S, Length 53 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-S-202ENST00000425174 SORCS1Q8WY21 1168 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 GOLGA2P5Q9HBQ8 144 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 LPAP08519 4548 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 LAMA5O15230 3695 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 MTORP42345 2549 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 PDZD2O15018 2839 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 AKAP13Q12802 2813 aa-0.33□□□□□ -2.46
HLA-S-202ENST00000425174 ERBB3P21860 1342 aa-0.34□□□□□ -2.46
HLA-S-202ENST00000425174 NIPBLQ6KC79 2804 aaeCLIP-0.34□□□□□ -2.46
HLA-S-202ENST00000425174 LCE2CQ5TA81 110 aa-0.34□□□□□ -2.46
HLA-S-202ENST00000425174 PCNX1Q96RV3 2341 aa-0.34□□□□□ -2.46
HLA-S-202ENST00000425174 LRP1Q07954 4544 aaKnown RBP-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 SORL1Q92673 2214 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 MT4P47944 62 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP10-11P60412 298 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 ATG9BQ674R7 924 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 SERINC5Q86VE9 423 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 BMPERQ8N8U9 685 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 DHX36Q9H2U1 1008 aaKnown RBP-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 CACNA1EQ15878 2313 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 SHANK1Q9Y566 2161 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 COL6A6A6NMZ7 2263 aa-0.35□□□□□ -2.47
HLA-S-202ENST00000425174 PKD1L2Q7Z442 2459 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 FAT2Q9NYQ8 4349 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 TEX15Q9BXT5 2789 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 SPTBN2O15020 2390 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 EGFRP00533 1210 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 DRD4P21917 467 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 KRT9P35527 623 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 WASP42768 502 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 POTEGQ6S5H5 508 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 GDF7Q7Z4P5 450 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 BRIP1Q9BX63 1249 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 FHDC1Q9C0D6 1143 aaPredicted RBP-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 TNMDQ9H2S6 317 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 TNCP24821 2201 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 WNK2Q9Y3S1 2297 aa-0.36□□□□□ -2.47
HLA-S-202ENST00000425174 BIRC6Q9NR09 4857 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 TNRC18O15417 2968 aaPredicted RBP-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 CEP295Q9C0D2 2601 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 SMCPP49901 116 aaPredicted RBP-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 CRIPAKQ8N1N5 446 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 ZNF579Q8NAF0 562 aaKnown RBP-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP2-2Q9BYT5 123 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 SSUH2Q9Y2M2 353 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 C2CD3Q4AC94 2353 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 LAMA3Q16787 3333 aa-0.37□□□□□ -2.47
HLA-S-202ENST00000425174 HSPG2P98160 4391 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 RUSC2Q8N2Y8 1516 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 GCN1Q92616 2671 aaKnown RBP-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 LYSTQ99698 3801 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 LAMA1P25391 3075 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 PTPRZ1P23471 2315 aaPredicted RBP-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 TLN1Q9Y490 2541 aaKnown RBP-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 COBLO75128 1261 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 LHX8Q68G74 356 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 SP7Q8TDD2 431 aaPredicted RBP-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 ZSWIM6Q9HCJ5 1215 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 ITPR1Q14643 2758 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 CHD9Q3L8U1 2897 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
HLA-S-202ENST00000425174 KDM4FA0A1W2PPD8 638 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 NOVP48745 357 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 VASPP50552 380 aaPredicted RBP-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP19-4Q3LI73 84 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP19-7Q3SYF9 63 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 HIST2H2BDQ6DRA6 164 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 FUBP1Q96AE4 644 aaKnown RBP-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 PRRC2CQ9Y520 2896 aaKnown RBP-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 PKD1L1Q8TDX9 2849 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 LRRK2Q5S007 2527 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 SALL3Q9BXA9 1300 aa-0.39□□□□□ -2.47
HLA-S-202ENST00000425174 FAM186AA6NE01 2351 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 ICE1Q9Y2F5 2266 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 PIEZO2Q9H5I5 2752 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 AMHP03971 560 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 FBLP22087 321 aaKnown RBP-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 SFPQP23246 707 aaKnown RBP eCLIP-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 MMRN1Q13201 1228 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP13-3Q3SY46 172 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 BSPRYQ5W0U4 402 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 APC2O95996 2303 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
HLA-S-202ENST00000425174 TACC2O95359 2948 aa-0.41□□□□□ -2.47
HLA-S-202ENST00000425174 TLN2Q9Y4G6 2542 aa-0.41□□□□□ -2.47
HLA-S-202ENST00000425174 KRTAP29-1A8MX34 341 aaPredicted RBP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 PYCARD-AS1I3L0S3 204 aa-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 FZD5Q13467 585 aa-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 TRA2AQ13595 282 aaKnown RBP eCLIP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 GRIN2CQ14957 1233 aa-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 CPSF6Q16630 551 aaKnown RBP eCLIP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 LCE2DQ5TA82 110 aaPredicted RBP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 NAF1Q96HR8 494 aaKnown RBP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 WFDC1Q9HC57 220 aa-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 WBP11Q9Y2W2 641 aaKnown RBP-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 DMXL2Q8TDJ6 3036 aa-0.41□□□□□ -2.48
HLA-S-202ENST00000425174 MYO15AQ9UKN7 3530 aa-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 RPS2P15880 293 aaKnown RBP-0.42□□□□□ -2.48
HLA-S-202ENST00000425174 FBXO38Q6PIJ6 1188 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms