RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
SHANK2-207ENST00000425049 FBXO41Q8TF61 875 aa25.72■■□□□ 1.71
SHANK2-207ENST00000425049 TCOF1Q13428 1488 aaKnown RBP25.72■■□□□ 1.71
SHANK2-207ENST00000425049 ABCC5O15440 1437 aa25.71■■□□□ 1.71
SHANK2-207ENST00000425049 CROCC2H7BZ55 1655 aa25.71■■□□□ 1.71
SHANK2-207ENST00000425049 EIF2AK4Q9P2K8 1649 aaKnown RBP25.71■■□□□ 1.71
SHANK2-207ENST00000425049 DUOX2Q9NRD8 1548 aa25.71■■□□□ 1.71
SHANK2-207ENST00000425049 NCOA1Q15788 1441 aa25.71■■□□□ 1.71
SHANK2-207ENST00000425049 KIF15Q9NS87 1388 aa25.7■■□□□ 1.71
SHANK2-207ENST00000425049 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.71
SHANK2-207ENST00000425049 PZPP20742 1482 aa25.7■■□□□ 1.7
SHANK2-207ENST00000425049 DAPK1P53355 1430 aa25.7■■□□□ 1.7
SHANK2-207ENST00000425049 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.7
SHANK2-207ENST00000425049 ZNF142P52746 1687 aaPredicted RBP25.69■■□□□ 1.7
SHANK2-207ENST00000425049 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
SHANK2-207ENST00000425049 CAMSAP1Q5T5Y3 1602 aa25.69■■□□□ 1.7
SHANK2-207ENST00000425049 PTPRTO14522 1441 aa25.67■■□□□ 1.7
SHANK2-207ENST00000425049 TNRQ92752 1358 aa25.67■■□□□ 1.7
SHANK2-207ENST00000425049 RRP7BPQ9NSQ0 103 aa25.65■■□□□ 1.7
SHANK2-207ENST00000425049 ZC3H13Q5T200 1668 aaKnown RBP25.64■■□□□ 1.7
SHANK2-207ENST00000425049 ERBINQ96RT1 1412 aa25.63■■□□□ 1.69
SHANK2-207ENST00000425049 ABCC3O15438 1527 aa25.63■■□□□ 1.69
SHANK2-207ENST00000425049 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
SHANK2-207ENST00000425049 FBXO31Q5XUX0 539 aaPredicted RBP25.63■■□□□ 1.69
SHANK2-207ENST00000425049 CERKQ8TCT0 537 aa25.63■■□□□ 1.69
SHANK2-207ENST00000425049 ANKRD30AQ9BXX3 1397 aa25.63■■□□□ 1.69
SHANK2-207ENST00000425049 A2ML1A8K2U0 1454 aa25.63■■□□□ 1.69
SHANK2-207ENST00000425049 PLA2R1Q13018 1463 aa25.62■■□□□ 1.69
SHANK2-207ENST00000425049 CHIC2Q9UKJ5 165 aa25.6■■□□□ 1.69
SHANK2-207ENST00000425049 PKD2Q13563 968 aa25.59■■□□□ 1.69
SHANK2-207ENST00000425049 MROH1Q8NDA8 1641 aa25.58■■□□□ 1.69
SHANK2-207ENST00000425049 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
SHANK2-207ENST00000425049 NLRP1Q9C000 1473 aa25.56■■□□□ 1.68
SHANK2-207ENST00000425049 KANK1Q14678 1352 aa25.55■■□□□ 1.68
SHANK2-207ENST00000425049 PRDM15P57071 1507 aaPredicted RBP25.54■■□□□ 1.68
SHANK2-207ENST00000425049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.681e-7■□□□□ 9.2
SHANK2-207ENST00000425049 CEP152O94986 1710 aa25.53■■□□□ 1.68
SHANK2-207ENST00000425049 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
SHANK2-207ENST00000425049 ADGRL2O95490 1459 aa25.5■■□□□ 1.67
SHANK2-207ENST00000425049 SPATA31D1Q6ZQQ2 1576 aa25.5■■□□□ 1.67
SHANK2-207ENST00000425049 THEMISQ8N1K5 641 aaPredicted RBP25.49■■□□□ 1.67
SHANK2-207ENST00000425049 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
SHANK2-207ENST00000425049 DEPDC5O75140 1603 aa25.48■■□□□ 1.67
SHANK2-207ENST00000425049 ARHGAP31Q2M1Z3 1444 aa25.45■■□□□ 1.66
SHANK2-207ENST00000425049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.668e-9■■■■■ 30
SHANK2-207ENST00000425049 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
SHANK2-207ENST00000425049 POLR1AO95602 1720 aaPredicted RBP25.43■■□□□ 1.66
SHANK2-207ENST00000425049 LTBP4Q8N2S1 1624 aa25.42■■□□□ 1.66
SHANK2-207ENST00000425049 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
SHANK2-207ENST00000425049 ANKRD50Q9ULJ7 1429 aa25.42■■□□□ 1.66
SHANK2-207ENST00000425049 ZNF335Q9H4Z2 1342 aaPredicted RBP25.4■■□□□ 1.66
SHANK2-207ENST00000425049 LMTK2Q8IWU2 1503 aa25.38■■□□□ 1.65
SHANK2-207ENST00000425049 NEURL4Q96JN8 1562 aa25.37■■□□□ 1.65
SHANK2-207ENST00000425049 IQSEC2Q5JU85 1478 aa25.37■■□□□ 1.65
SHANK2-207ENST00000425049 CFAP65Q6ZU64 1925 aaKnown RBP25.36■■□□□ 1.65
SHANK2-207ENST00000425049 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
SHANK2-207ENST00000425049 ITGAEP38570 1179 aa25.34■■□□□ 1.65
SHANK2-207ENST00000425049 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
SHANK2-207ENST00000425049 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
SHANK2-207ENST00000425049 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
SHANK2-207ENST00000425049 STAG3Q9UJ98 1225 aa25.32■■□□□ 1.64
SHANK2-207ENST00000425049 UBR1Q8IWV7 1749 aa25.3■■□□□ 1.64
SHANK2-207ENST00000425049 MED14O60244 1454 aa25.29■■□□□ 1.64
SHANK2-207ENST00000425049 IQGAP1P46940 1657 aa25.27■■□□□ 1.64
SHANK2-207ENST00000425049 SCAF11Q99590 1463 aaKnown RBP25.26■■□□□ 1.63
SHANK2-207ENST00000425049 EID1Q9Y6B2 187 aa25.25■■□□□ 1.63
SHANK2-207ENST00000425049 RPRD2Q5VT52 1461 aaKnown RBP25.25■■□□□ 1.63
SHANK2-207ENST00000425049 CPS1P31327 1500 aa25.25■■□□□ 1.63
SHANK2-207ENST00000425049 UNC13BO14795 1591 aa25.25■■□□□ 1.63
SHANK2-207ENST00000425049 PIK3C2BO00750 1634 aa25.25■■□□□ 1.63
SHANK2-207ENST00000425049 NOS1P29475 1434 aa25.23■■□□□ 1.63
SHANK2-207ENST00000425049 TET3O43151 1660 aa25.23■■□□□ 1.63
SHANK2-207ENST00000425049 SLIT1O75093 1534 aa25.22■■□□□ 1.63
SHANK2-207ENST00000425049 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
SHANK2-207ENST00000425049 SYNMO15061 1565 aa25.22■■□□□ 1.63
SHANK2-207ENST00000425049 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
SHANK2-207ENST00000425049 UBAP1LF5GYI3 381 aa25.21■■□□□ 1.63
SHANK2-207ENST00000425049 IDI1Q13907 227 aa25.2■■□□□ 1.62
SHANK2-207ENST00000425049 SLC52A1Q9NWF4 448 aa25.2■■□□□ 1.62
SHANK2-207ENST00000425049 TMEM2Q9UHN6 1383 aa25.19■■□□□ 1.62
SHANK2-207ENST00000425049 RRBP1Q9P2E9 1410 aaKnown RBP25.19■■□□□ 1.62
SHANK2-207ENST00000425049 KDM5AP29375 1690 aaKnown RBP25.18■■□□□ 1.62
SHANK2-207ENST00000425049 GCC2Q8IWJ2 1684 aa25.17■■□□□ 1.62
SHANK2-207ENST00000425049 ADGRB3O60242 1522 aa25.17■■□□□ 1.62
SHANK2-207ENST00000425049 LTKP29376 864 aa25.16■■□□□ 1.62
SHANK2-207ENST00000425049 NUP155O75694 1391 aa25.16■■□□□ 1.62
SHANK2-207ENST00000425049 IQGAP3Q86VI3 1631 aa25.14■■□□□ 1.61
SHANK2-207ENST00000425049 TOM1O60784 492 aa25.09■■□□□ 1.61
SHANK2-207ENST00000425049 E9PCH4 1651 aa25.08■■□□□ 1.61
SHANK2-207ENST00000425049 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.6
SHANK2-207ENST00000425049 CHGAP10645 457 aaKnown RBP25.06■■□□□ 1.6
SHANK2-207ENST00000425049 BCANQ96GW7 911 aa25.05■■□□□ 1.6
SHANK2-207ENST00000425049 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
SHANK2-207ENST00000425049 HDGFP51858 240 aaKnown RBP25.04■■□□□ 1.6
SHANK2-207ENST00000425049 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
SHANK2-207ENST00000425049 PIP4K2BP78356 416 aa25.02■■□□□ 1.6
SHANK2-207ENST00000425049 STRCP1A6NGW2 1772 aa25.01■■□□□ 1.59
SHANK2-207ENST00000425049 NAIPQ13075 1403 aa25.01■■□□□ 1.59
SHANK2-207ENST00000425049 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
SHANK2-207ENST00000425049 TMEM131LA2VDJ0 1609 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms