RNA–Protein interactions for RNA: ENST00000424732.5

HP1BP3-208, Transcript of heterochromatin protein 1 binding protein 3, human

TSL 3

Gene HP1BP3, Length 970 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HP1BP3-208	ENST00000424732	TSPY10	P0CW01	314 aa		28.61	■■■□□ 2.17
HP1BP3-208	ENST00000424732	KANK4	Q5T7N3	995 aa	Predicted RBP	28.61	■■■□□ 2.17
HP1BP3-208	ENST00000424732	PLA2R1	Q13018	1463 aa		28.6	■■■□□ 2.17
HP1BP3-208	ENST00000424732	KIF3B	O15066	747 aa		28.59	■■■□□ 2.17
HP1BP3-208	ENST00000424732	RNF17	Q9BXT8	1623 aa	Known RBP	28.58	■■■□□ 2.17
HP1BP3-208	ENST00000424732	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.57	■■■□□ 2.16
HP1BP3-208	ENST00000424732	PZP	P20742	1482 aa		28.56	■■■□□ 2.16
HP1BP3-208	ENST00000424732	A2ML1	A8K2U0	1454 aa		28.53	■■■□□ 2.16
HP1BP3-208	ENST00000424732	ZC3H13	Q5T200	1668 aa	Known RBP	28.53	■■■□□ 2.16
HP1BP3-208	ENST00000424732	TCOF1	Q13428	1488 aa	Known RBP	28.53	■■■□□ 2.16
HP1BP3-208	ENST00000424732	LTBP4	Q8N2S1	1624 aa		28.51	■■■□□ 2.15
HP1BP3-208	ENST00000424732	CROCC2	H7BZ55	1655 aa		28.51	■■■□□ 2.15
HP1BP3-208	ENST00000424732	DNMT1	P26358	1616 aa	Known RBP	28.51	■■■□□ 2.15
HP1BP3-208	ENST00000424732	APLP2	Q06481	763 aa		28.49	■■■□□ 2.15
HP1BP3-208	ENST00000424732	PKD2	Q13563	968 aa		28.49	■■■□□ 2.15
HP1BP3-208	ENST00000424732	WASHC2C	Q9Y4E1	1318 aa		28.48	■■■□□ 2.15
HP1BP3-208	ENST00000424732	SHANK2	Q9UPX8	1470 aa		28.48	■■■□□ 2.15
HP1BP3-208	ENST00000424732	PTPN23	Q9H3S7	1636 aa		28.48	■■■□□ 2.15
HP1BP3-208	ENST00000424732	IQSEC2	Q5JU85	1478 aa		28.47	■■■□□ 2.15
HP1BP3-208	ENST00000424732	TNR	Q92752	1358 aa		28.47	■■■□□ 2.15
HP1BP3-208	ENST00000424732	DUOX2	Q9NRD8	1548 aa		28.45	■■■□□ 2.15
HP1BP3-208	ENST00000424732	ABCC3	O15438	1527 aa		28.44	■■■□□ 2.14
HP1BP3-208	ENST00000424732	POLR1A	O95602	1720 aa	Predicted RBP	28.44	■■■□□ 2.14
HP1BP3-208	ENST00000424732	NCKAP5L	Q9HCH0	1330 aa		28.43	■■■□□ 2.14
HP1BP3-208	ENST00000424732	MROH1	Q8NDA8	1641 aa		28.43	■■■□□ 2.14
HP1BP3-208	ENST00000424732	NLRP1	Q9C000	1473 aa		28.4	■■■□□ 2.14
HP1BP3-208	ENST00000424732	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.4	■■■□□ 2.14
HP1BP3-208	ENST00000424732	FGD6	Q6ZV73	1430 aa		28.39	■■■□□ 2.14
HP1BP3-208	ENST00000424732	SPATA31D1	Q6ZQQ2	1576 aa		28.38	■■■□□ 2.13
HP1BP3-208	ENST00000424732	ABCC5	O15440	1437 aa		28.38	■■■□□ 2.13
HP1BP3-208	ENST00000424732	CEP152	O94986	1710 aa		28.38	■■■□□ 2.13
HP1BP3-208	ENST00000424732	ERBIN	Q96RT1	1412 aa		28.36	■■■□□ 2.13
HP1BP3-208	ENST00000424732	DAPK1	P53355	1430 aa		28.35	■■■□□ 2.13
HP1BP3-208	ENST00000424732	PRDM15	P57071	1507 aa	Predicted RBP	28.35	■■■□□ 2.13
HP1BP3-208	ENST00000424732	KIF15	Q9NS87	1388 aa		28.35	■■■□□ 2.13
HP1BP3-208	ENST00000424732	NEURL4	Q96JN8	1562 aa		28.34	■■■□□ 2.13
HP1BP3-208	ENST00000424732	UGGT1	Q9NYU2	1555 aa		28.33	■■■□□ 2.12
HP1BP3-208	ENST00000424732	ERVK-7	P63135	1459 aa		28.31	■■■□□ 2.12
HP1BP3-208	ENST00000424732	DEPDC5	O75140	1603 aa		28.31	■■■□□ 2.12
HP1BP3-208	ENST00000424732	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.3	■■■□□ 2.12
HP1BP3-208	ENST00000424732	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.27	■■■□□ 2.12
HP1BP3-208	ENST00000424732	CFAP65	Q6ZU64	1925 aa	Known RBP	28.26	■■■□□ 2.11
HP1BP3-208	ENST00000424732	ARHGAP31	Q2M1Z3	1444 aa		28.25	■■■□□ 2.11
HP1BP3-208	ENST00000424732	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	28.24	■■■□□ 2.11	3e-7	■□□□□ 10.7
HP1BP3-208	ENST00000424732	MED14	O60244	1454 aa		28.23	■■■□□ 2.11
HP1BP3-208	ENST00000424732	ANKRD30A	Q9BXX3	1397 aa		28.23	■■■□□ 2.11
HP1BP3-208	ENST00000424732	ANKLE2	Q86XL3	938 aa		28.22	■■■□□ 2.11
HP1BP3-208	ENST00000424732	RRP7BP	Q9NSQ0	103 aa		28.22	■■■□□ 2.11
HP1BP3-208	ENST00000424732	UBR1	Q8IWV7	1749 aa		28.21	■■■□□ 2.11
HP1BP3-208	ENST00000424732	ADGRL2	O95490	1459 aa		28.2	■■■□□ 2.1
HP1BP3-208	ENST00000424732	CPS1	P31327	1500 aa		28.19	■■■□□ 2.1
HP1BP3-208	ENST00000424732	IQGAP1	P46940	1657 aa		28.19	■■■□□ 2.1
HP1BP3-208	ENST00000424732	NPHP4	O75161	1426 aa	Predicted RBP	28.18	■■■□□ 2.1
HP1BP3-208	ENST00000424732	VWDE	Q8N2E2	1590 aa		28.17	■■■□□ 2.1
HP1BP3-208	ENST00000424732	LMTK2	Q8IWU2	1503 aa		28.17	■■■□□ 2.1
HP1BP3-208	ENST00000424732	KANK1	Q14678	1352 aa		28.16	■■■□□ 2.1
HP1BP3-208	ENST00000424732	CHIC2	Q9UKJ5	165 aa		28.11	■■■□□ 2.09
HP1BP3-208	ENST00000424732	KDM5A	P29375	1690 aa	Known RBP	28.1	■■■□□ 2.09
HP1BP3-208	ENST00000424732	SLIT1	O75093	1534 aa		28.09	■■■□□ 2.09
HP1BP3-208	ENST00000424732	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.08	■■■□□ 2.09	7e-9	■■□□□ 14.5
HP1BP3-208	ENST00000424732	ARHGAP23	Q9P227	1491 aa		28.08	■■■□□ 2.09
HP1BP3-208	ENST00000424732	PIK3C2B	O00750	1634 aa		28.07	■■■□□ 2.08
HP1BP3-208	ENST00000424732	UBAP1L	F5GYI3	381 aa		28.07	■■■□□ 2.08
HP1BP3-208	ENST00000424732	EFCAB6	Q5THR3	1501 aa		28.07	■■■□□ 2.08
HP1BP3-208	ENST00000424732	SCAF11	Q99590	1463 aa	Known RBP	28.06	■■■□□ 2.08
HP1BP3-208	ENST00000424732	FAM50A	Q14320	339 aa	Known RBP	28.05	■■■□□ 2.08
HP1BP3-208	ENST00000424732	SYNM	O15061	1565 aa		28.03	■■■□□ 2.08
HP1BP3-208	ENST00000424732	ANKRD50	Q9ULJ7	1429 aa		28.02	■■■□□ 2.08
HP1BP3-208	ENST00000424732	STRCP1	A6NGW2	1772 aa		28.01	■■■□□ 2.07
HP1BP3-208	ENST00000424732	NOS1	P29475	1434 aa		27.99	■■■□□ 2.07
HP1BP3-208	ENST00000424732	RPRD2	Q5VT52	1461 aa	Known RBP	27.98	■■■□□ 2.07
HP1BP3-208	ENST00000424732	TET3	O43151	1660 aa		27.97	■■■□□ 2.07
HP1BP3-208	ENST00000424732	UNC13B	O14795	1591 aa		27.96	■■■□□ 2.07
HP1BP3-208	ENST00000424732	GCC2	Q8IWJ2	1684 aa		27.95	■■■□□ 2.07
HP1BP3-208	ENST00000424732	TMEM2	Q9UHN6	1383 aa		27.95	■■■□□ 2.06
HP1BP3-208	ENST00000424732	DISP3	Q9P2K9	1392 aa		27.94	■■■□□ 2.06
HP1BP3-208	ENST00000424732	ADGRB3	O60242	1522 aa		27.93	■■■□□ 2.06
HP1BP3-208	ENST00000424732	TOM1	O60784	492 aa		27.93	■■■□□ 2.06
HP1BP3-208	ENST00000424732	TXNDC2	Q86VQ3	553 aa		27.93	■■■□□ 2.06
HP1BP3-208	ENST00000424732	ROCK1	Q13464	1354 aa		27.93	■■■□□ 2.06
HP1BP3-208	ENST00000424732	LTK	P29376	864 aa		27.92	■■■□□ 2.06
HP1BP3-208	ENST00000424732	EID1	Q9Y6B2	187 aa		27.92	■■■□□ 2.06
HP1BP3-208	ENST00000424732	LRRC7	Q96NW7	1537 aa		27.92	■■■□□ 2.06
HP1BP3-208	ENST00000424732	STAG3	Q9UJ98	1225 aa		27.9	■■■□□ 2.06
HP1BP3-208	ENST00000424732	IDI1	Q13907	227 aa		27.89	■■■□□ 2.06
HP1BP3-208	ENST00000424732	ALK	Q9UM73	1620 aa		27.89	■■■□□ 2.05
HP1BP3-208	ENST00000424732	SLC52A1	Q9NWF4	448 aa		27.87	■■■□□ 2.05
HP1BP3-208	ENST00000424732	IQGAP3	Q86VI3	1631 aa		27.85	■■■□□ 2.05
HP1BP3-208	ENST00000424732	XIRP1	Q702N8	1843 aa	Known RBP	27.82	■■■□□ 2.04
HP1BP3-208	ENST00000424732	MYO5B	Q9ULV0	1848 aa		27.82	■■■□□ 2.04
HP1BP3-208	ENST00000424732		E9PCH4	1651 aa		27.81	■■■□□ 2.04
HP1BP3-208	ENST00000424732	PIP4K2B	P78356	416 aa		27.81	■■■□□ 2.04
HP1BP3-208	ENST00000424732	SCAF1	Q9H7N4	1312 aa	Known RBP	27.81	■■■□□ 2.04
HP1BP3-208	ENST00000424732	TMEM131L	A2VDJ0	1609 aa		27.78	■■■□□ 2.04
HP1BP3-208	ENST00000424732	HSPA1L	P34931	641 aa		27.76	■■■□□ 2.03
HP1BP3-208	ENST00000424732	ZFYVE9	O95405	1425 aa		27.75	■■■□□ 2.03
HP1BP3-208	ENST00000424732	NWD1	Q149M9	1564 aa		27.73	■■■□□ 2.03
HP1BP3-208	ENST00000424732	ILDR2	Q71H61	639 aa		27.72	■■■□□ 2.03
HP1BP3-208	ENST00000424732	NKTR	P30414	1462 aa	Known RBP	27.7	■■■□□ 2.02
HP1BP3-208	ENST00000424732	RRBP1	Q9P2E9	1410 aa	Known RBP	27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms