RNA–Protein interactions for RNA: ENST00000424415.1

FAM239B-202, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 2,194 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-202ENST00000424415 ERBINQ96RT1 1412 aa14.36□□□□□ -0.11
FAM239B-202ENST00000424415 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
FAM239B-202ENST00000424415 PLCH2O75038 1416 aa14.35□□□□□ -0.11
FAM239B-202ENST00000424415 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
FAM239B-202ENST00000424415 ARAP3Q8WWN8 1544 aa14.35□□□□□ -0.11
FAM239B-202ENST00000424415 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
FAM239B-202ENST00000424415 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.11
FAM239B-202ENST00000424415 IQGAP3Q86VI3 1631 aa14.33□□□□□ -0.12
FAM239B-202ENST00000424415 ATP10AO60312 1499 aa14.33□□□□□ -0.12
FAM239B-202ENST00000424415 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
FAM239B-202ENST00000424415 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
FAM239B-202ENST00000424415 MAGI2Q86UL8 1455 aa14.32□□□□□ -0.12
FAM239B-202ENST00000424415 ZBED9Q6R2W3 1325 aa14.32□□□□□ -0.12
FAM239B-202ENST00000424415 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
FAM239B-202ENST00000424415 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
FAM239B-202ENST00000424415 RTEL1-TNFRSF6BF6WH68 1400 aa14.29□□□□□ -0.12
FAM239B-202ENST00000424415 DHX29Q7Z478 1369 aaKnown RBP14.29□□□□□ -0.12
FAM239B-202ENST00000424415 LAMC1P11047 1609 aa14.29□□□□□ -0.12
FAM239B-202ENST00000424415 ABCC1P33527 1531 aa14.28□□□□□ -0.12
FAM239B-202ENST00000424415 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
FAM239B-202ENST00000424415 DCAF11Q8TEB1 546 aa14.27□□□□□ -0.12
FAM239B-202ENST00000424415 BCORL1Q5H9F3 1711 aa14.27□□□□□ -0.12
FAM239B-202ENST00000424415 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.12
FAM239B-202ENST00000424415 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.13
FAM239B-202ENST00000424415 GPRASP1Q5JY77 1395 aa14.27□□□□□ -0.13
FAM239B-202ENST00000424415 STAC3Q96MF2 364 aa14.27□□□□□ -0.13
FAM239B-202ENST00000424415 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
FAM239B-202ENST00000424415 RALBP1Q15311 655 aa14.23□□□□□ -0.13
FAM239B-202ENST00000424415 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
FAM239B-202ENST00000424415 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
FAM239B-202ENST00000424415 PLA2R1Q13018 1463 aa14.22□□□□□ -0.13
FAM239B-202ENST00000424415 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
FAM239B-202ENST00000424415 WASHC2CQ9Y4E1 1318 aa14.22□□□□□ -0.13
FAM239B-202ENST00000424415 WDR7Q9Y4E6 1490 aa14.21□□□□□ -0.13
FAM239B-202ENST00000424415 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
FAM239B-202ENST00000424415 BCANQ96GW7 911 aa14.2□□□□□ -0.14
FAM239B-202ENST00000424415 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
FAM239B-202ENST00000424415 A2MP01023 1474 aa14.2□□□□□ -0.14
FAM239B-202ENST00000424415 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
FAM239B-202ENST00000424415 CCDC184Q52MB2 194 aa14.2□□□□□ -0.14
FAM239B-202ENST00000424415 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
FAM239B-202ENST00000424415 E9PCH4 1651 aa14.19□□□□□ -0.14
FAM239B-202ENST00000424415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
FAM239B-202ENST00000424415 MYBBP1AQ9BQG0 1328 aaKnown RBP14.18□□□□□ -0.14
FAM239B-202ENST00000424415 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
FAM239B-202ENST00000424415 ZFYVE16Q7Z3T8 1539 aa14.17□□□□□ -0.14
FAM239B-202ENST00000424415 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
FAM239B-202ENST00000424415 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
FAM239B-202ENST00000424415 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
FAM239B-202ENST00000424415 KANK1Q14678 1352 aa14.17□□□□□ -0.14
FAM239B-202ENST00000424415 NEURL4Q96JN8 1562 aa14.16□□□□□ -0.14
FAM239B-202ENST00000424415 DEPDC5O75140 1603 aa14.16□□□□□ -0.14
FAM239B-202ENST00000424415 ABCA9Q8IUA7 1624 aa14.16□□□□□ -0.14
FAM239B-202ENST00000424415 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
FAM239B-202ENST00000424415 TRPM2O94759 1503 aa14.15□□□□□ -0.14
FAM239B-202ENST00000424415 COL17A1Q9UMD9 1497 aaPredicted RBP14.15□□□□□ -0.14
FAM239B-202ENST00000424415 INSRP06213 1382 aa14.15□□□□□ -0.14
FAM239B-202ENST00000424415 PTPRTO14522 1441 aa14.14□□□□□ -0.15
FAM239B-202ENST00000424415 PNISRQ8TF01 805 aaKnown RBP14.14□□□□□ -0.15
FAM239B-202ENST00000424415 FANCAO15360 1455 aa14.14□□□□□ -0.15
FAM239B-202ENST00000424415 INO80Q9ULG1 1556 aaPredicted RBP14.13□□□□□ -0.15
FAM239B-202ENST00000424415 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
FAM239B-202ENST00000424415 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
FAM239B-202ENST00000424415 TMF1P82094 1093 aa14.13□□□□□ -0.15
FAM239B-202ENST00000424415 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
FAM239B-202ENST00000424415 TET3O43151 1660 aa14.12□□□□□ -0.15
FAM239B-202ENST00000424415 RGL3Q3MIN7 710 aa14.12□□□□□ -0.15
FAM239B-202ENST00000424415 ATP7AQ04656 1500 aa14.12□□□□□ -0.15
FAM239B-202ENST00000424415 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
FAM239B-202ENST00000424415 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
FAM239B-202ENST00000424415 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
FAM239B-202ENST00000424415 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
FAM239B-202ENST00000424415 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
FAM239B-202ENST00000424415 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
FAM239B-202ENST00000424415 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
FAM239B-202ENST00000424415 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
FAM239B-202ENST00000424415 TESK2Q96S53 571 aa14.09□□□□□ -0.15
FAM239B-202ENST00000424415 SPHKAPQ2M3C7 1700 aa14.09□□□□□ -0.15
FAM239B-202ENST00000424415 CEP152O94986 1710 aa14.08□□□□□ -0.16
FAM239B-202ENST00000424415 NBPF1Q3BBV0 1214 aa14.07□□□□□ -0.16
FAM239B-202ENST00000424415 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
FAM239B-202ENST00000424415 CFAP74Q9C0B2 1584 aa14.07□□□□□ -0.16
FAM239B-202ENST00000424415 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
FAM239B-202ENST00000424415 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
FAM239B-202ENST00000424415 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
FAM239B-202ENST00000424415 PDE3BQ13370 1112 aa14.06□□□□□ -0.16
FAM239B-202ENST00000424415 ZBTB22O15209 634 aa14.05□□□□□ -0.16
FAM239B-202ENST00000424415 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
FAM239B-202ENST00000424415 ZNF518AQ6AHZ1 1483 aa14.05□□□□□ -0.16
FAM239B-202ENST00000424415 ASXL2Q76L83 1435 aa14.05□□□□□ -0.16
FAM239B-202ENST00000424415 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
FAM239B-202ENST00000424415 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
FAM239B-202ENST00000424415 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
FAM239B-202ENST00000424415 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
FAM239B-202ENST00000424415 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
FAM239B-202ENST00000424415 DISP3Q9P2K9 1392 aa14.03□□□□□ -0.16
FAM239B-202ENST00000424415 MYOM2P54296 1465 aa14.03□□□□□ -0.16
FAM239B-202ENST00000424415 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.16
FAM239B-202ENST00000424415 CLTCL1P53675 1640 aa14.02□□□□□ -0.17
FAM239B-202ENST00000424415 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms