RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 ZNF518AQ6AHZ1 1483 aa13.63□□□□□ -0.23
CLCN3P1-201ENST00000423965 AFAP1Q8N556 730 aa13.63□□□□□ -0.23
CLCN3P1-201ENST00000423965 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CLCN3P1-201ENST00000423965 CPS1P31327 1500 aa13.63□□□□□ -0.23
CLCN3P1-201ENST00000423965 ZMYM3Q14202 1370 aa13.6□□□□□ -0.23
CLCN3P1-201ENST00000423965 PRXQ9BXM0 1461 aa13.6□□□□□ -0.23
CLCN3P1-201ENST00000423965 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
CLCN3P1-201ENST00000423965 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CLCN3P1-201ENST00000423965 SHANK2Q9UPX8 1470 aa13.58□□□□□ -0.24
CLCN3P1-201ENST00000423965 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
CLCN3P1-201ENST00000423965 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
CLCN3P1-201ENST00000423965 KDM5CP41229 1560 aa13.57□□□□□ -0.24
CLCN3P1-201ENST00000423965 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
CLCN3P1-201ENST00000423965 DIP2CQ9Y2E4 1556 aa13.57□□□□□ -0.24
CLCN3P1-201ENST00000423965 MIER1Q8N108 512 aa13.54□□□□□ -0.24
CLCN3P1-201ENST00000423965 MROH2AA6NES4 1674 aa13.53□□□□□ -0.24
CLCN3P1-201ENST00000423965 ALKQ9UM73 1620 aa13.52□□□□□ -0.25
CLCN3P1-201ENST00000423965 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
CLCN3P1-201ENST00000423965 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
CLCN3P1-201ENST00000423965 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
CLCN3P1-201ENST00000423965 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
CLCN3P1-201ENST00000423965 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
CLCN3P1-201ENST00000423965 SRCAPQ6ZRS2 3230 aa13.5□□□□□ -0.25
CLCN3P1-201ENST00000423965 HAX1O00165 279 aa13.5□□□□□ -0.25
CLCN3P1-201ENST00000423965 ABCA6Q8N139 1617 aa13.49□□□□□ -0.25
CLCN3P1-201ENST00000423965 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
CLCN3P1-201ENST00000423965 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
CLCN3P1-201ENST00000423965 MYO3AQ8NEV4 1616 aa13.47□□□□□ -0.25
CLCN3P1-201ENST00000423965 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLCN3P1-201ENST00000423965 ANKLE2Q86XL3 938 aa13.46□□□□□ -0.25
CLCN3P1-201ENST00000423965 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.25
CLCN3P1-201ENST00000423965 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
CLCN3P1-201ENST00000423965 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
CLCN3P1-201ENST00000423965 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
CLCN3P1-201ENST00000423965 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
CLCN3P1-201ENST00000423965 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
CLCN3P1-201ENST00000423965 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
CLCN3P1-201ENST00000423965 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
CLCN3P1-201ENST00000423965 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
CLCN3P1-201ENST00000423965 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
CLCN3P1-201ENST00000423965 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
CLCN3P1-201ENST00000423965 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
CLCN3P1-201ENST00000423965 MED14O60244 1454 aa13.38□□□□□ -0.27
CLCN3P1-201ENST00000423965 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
CLCN3P1-201ENST00000423965 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
CLCN3P1-201ENST00000423965 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
CLCN3P1-201ENST00000423965 GGT6Q6P531 493 aa13.37□□□□□ -0.27
CLCN3P1-201ENST00000423965 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
CLCN3P1-201ENST00000423965 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
CLCN3P1-201ENST00000423965 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
CLCN3P1-201ENST00000423965 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
CLCN3P1-201ENST00000423965 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
CLCN3P1-201ENST00000423965 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
CLCN3P1-201ENST00000423965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLCN3P1-201ENST00000423965 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
CLCN3P1-201ENST00000423965 KIF14Q15058 1648 aa13.34□□□□□ -0.27
CLCN3P1-201ENST00000423965 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
CLCN3P1-201ENST00000423965 ABCC1P33527 1531 aa13.34□□□□□ -0.27
CLCN3P1-201ENST00000423965 CLIP1P30622 1438 aa13.33□□□□□ -0.28
CLCN3P1-201ENST00000423965 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
CLCN3P1-201ENST00000423965 TNRQ92752 1358 aa13.32□□□□□ -0.28
CLCN3P1-201ENST00000423965 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
CLCN3P1-201ENST00000423965 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
CLCN3P1-201ENST00000423965 SYNMO15061 1565 aa13.31□□□□□ -0.28
CLCN3P1-201ENST00000423965 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
CLCN3P1-201ENST00000423965 EVX2Q03828 476 aa13.3□□□□□ -0.28
CLCN3P1-201ENST00000423965 ZNF772Q68DY9 489 aaPredicted RBP13.3□□□□□ -0.28
CLCN3P1-201ENST00000423965 A2MP01023 1474 aa13.29□□□□□ -0.28
CLCN3P1-201ENST00000423965 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
CLCN3P1-201ENST00000423965 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
CLCN3P1-201ENST00000423965 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CLCN3P1-201ENST00000423965 SAMD9LQ8IVG5 1584 aa13.28□□□□□ -0.28
CLCN3P1-201ENST00000423965 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
CLCN3P1-201ENST00000423965 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.28
CLCN3P1-201ENST00000423965 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
CLCN3P1-201ENST00000423965 PLXNC1O60486 1568 aa13.27□□□□□ -0.29
CLCN3P1-201ENST00000423965 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
CLCN3P1-201ENST00000423965 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
CLCN3P1-201ENST00000423965 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
CLCN3P1-201ENST00000423965 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
CLCN3P1-201ENST00000423965 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
CLCN3P1-201ENST00000423965 RXRBP28702 533 aa13.25□□□□□ -0.29
CLCN3P1-201ENST00000423965 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
CLCN3P1-201ENST00000423965 JCADQ9P266 1359 aa13.24□□□□□ -0.29
CLCN3P1-201ENST00000423965 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
CLCN3P1-201ENST00000423965 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
CLCN3P1-201ENST00000423965 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
CLCN3P1-201ENST00000423965 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLCN3P1-201ENST00000423965 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
CLCN3P1-201ENST00000423965 PZPP20742 1482 aa13.23□□□□□ -0.29
CLCN3P1-201ENST00000423965 ATP7AQ04656 1500 aa13.22□□□□□ -0.29
CLCN3P1-201ENST00000423965 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
CLCN3P1-201ENST00000423965 CDK12Q9NYV4 1490 aaPredicted RBP13.21□□□□□ -0.3
CLCN3P1-201ENST00000423965 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
CLCN3P1-201ENST00000423965 KIAA1107Q9UPP5 1409 aa13.2□□□□□ -0.3
CLCN3P1-201ENST00000423965 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
CLCN3P1-201ENST00000423965 WASHC2CQ9Y4E1 1318 aa13.18□□□□□ -0.3
CLCN3P1-201ENST00000423965 MEX3CQ5U5Q3 659 aaKnown RBP13.18□□□□□ -0.3
CLCN3P1-201ENST00000423965 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
CLCN3P1-201ENST00000423965 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms