RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 KIF3BO15066 747 aa16.84■□□□□ 0.29
USP49-204ENST00000423567 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
USP49-204ENST00000423567 ABCC5O15440 1437 aa16.83■□□□□ 0.28
USP49-204ENST00000423567 SHANK2Q9UPX8 1470 aa16.83■□□□□ 0.28
USP49-204ENST00000423567 DAPK1P53355 1430 aa16.82■□□□□ 0.28
USP49-204ENST00000423567 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
USP49-204ENST00000423567 DNMT1P26358 1616 aaKnown RBP16.79■□□□□ 0.28
USP49-204ENST00000423567 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
USP49-204ENST00000423567 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
USP49-204ENST00000423567 KIF15Q9NS87 1388 aa16.78■□□□□ 0.28
USP49-204ENST00000423567 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
USP49-204ENST00000423567 CHIC2Q9UKJ5 165 aa16.78■□□□□ 0.28
USP49-204ENST00000423567 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
USP49-204ENST00000423567 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
USP49-204ENST00000423567 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
USP49-204ENST00000423567 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
USP49-204ENST00000423567 UHRF1BP1Q6BDS2 1440 aa16.75■□□□□ 0.27
USP49-204ENST00000423567 FAM135AQ9P2D6 1515 aa16.75■□□□□ 0.27
USP49-204ENST00000423567 MROH2AA6NES4 1674 aa16.75■□□□□ 0.27
USP49-204ENST00000423567 C3P01024 1663 aa16.75■□□□□ 0.27
USP49-204ENST00000423567 NPATQ14207 1427 aa16.73■□□□□ 0.27
USP49-204ENST00000423567 ERBINQ96RT1 1412 aa16.73■□□□□ 0.27
USP49-204ENST00000423567 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
USP49-204ENST00000423567 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
USP49-204ENST00000423567 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
USP49-204ENST00000423567 HSPA2P54652 639 aa16.72■□□□□ 0.27
USP49-204ENST00000423567 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
USP49-204ENST00000423567 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
USP49-204ENST00000423567 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
USP49-204ENST00000423567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.26
USP49-204ENST00000423567 RNF17Q9BXT8 1623 aaKnown RBP16.69■□□□□ 0.26
USP49-204ENST00000423567 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
USP49-204ENST00000423567 ITGAEP38570 1179 aa16.68■□□□□ 0.26
USP49-204ENST00000423567 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
USP49-204ENST00000423567 KANK1Q14678 1352 aa16.67■□□□□ 0.26
USP49-204ENST00000423567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP49-204ENST00000423567 PZPP20742 1482 aa16.66■□□□□ 0.26
USP49-204ENST00000423567 ABCC3O15438 1527 aa16.65■□□□□ 0.26
USP49-204ENST00000423567 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
USP49-204ENST00000423567 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
USP49-204ENST00000423567 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
USP49-204ENST00000423567 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
USP49-204ENST00000423567 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
USP49-204ENST00000423567 TNRQ92752 1358 aa16.63■□□□□ 0.25
USP49-204ENST00000423567 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
USP49-204ENST00000423567 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
USP49-204ENST00000423567 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
USP49-204ENST00000423567 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
USP49-204ENST00000423567 DEPDC5O75140 1603 aa16.58■□□□□ 0.24
USP49-204ENST00000423567 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
USP49-204ENST00000423567 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
USP49-204ENST00000423567 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
USP49-204ENST00000423567 CEP152O94986 1710 aa16.56■□□□□ 0.24
USP49-204ENST00000423567 CAMSAP1Q5T5Y3 1602 aa16.56■□□□□ 0.24
USP49-204ENST00000423567 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
USP49-204ENST00000423567 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
USP49-204ENST00000423567 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
USP49-204ENST00000423567 LMTK2Q8IWU2 1503 aa16.54■□□□□ 0.24
USP49-204ENST00000423567 SPATA31D1Q6ZQQ2 1576 aa16.53■□□□□ 0.24
USP49-204ENST00000423567 PKD2Q13563 968 aa16.52■□□□□ 0.24
USP49-204ENST00000423567 THEMISQ8N1K5 641 aaPredicted RBP16.52■□□□□ 0.24
USP49-204ENST00000423567 PLA2R1Q13018 1463 aa16.52■□□□□ 0.23
USP49-204ENST00000423567 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
USP49-204ENST00000423567 PTPRTO14522 1441 aa16.5■□□□□ 0.23
USP49-204ENST00000423567 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
USP49-204ENST00000423567 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
USP49-204ENST00000423567 NUP155O75694 1391 aa16.49■□□□□ 0.23
USP49-204ENST00000423567 UNC13BO14795 1591 aa16.48■□□□□ 0.23
USP49-204ENST00000423567 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
USP49-204ENST00000423567 STRCQ7RTU9 1775 aa16.48■□□□□ 0.23
USP49-204ENST00000423567 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
USP49-204ENST00000423567 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
USP49-204ENST00000423567 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
USP49-204ENST00000423567 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
USP49-204ENST00000423567 NAIPQ13075 1403 aa16.45■□□□□ 0.22
USP49-204ENST00000423567 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
USP49-204ENST00000423567 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
USP49-204ENST00000423567 TET3O43151 1660 aa16.43■□□□□ 0.22
USP49-204ENST00000423567 NOS1P29475 1434 aa16.43■□□□□ 0.22
USP49-204ENST00000423567 CFAP65Q6ZU64 1925 aaKnown RBP16.42■□□□□ 0.22
USP49-204ENST00000423567 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
USP49-204ENST00000423567 IDI1Q13907 227 aa16.41■□□□□ 0.22
USP49-204ENST00000423567 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
USP49-204ENST00000423567 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
USP49-204ENST00000423567 GCC2Q8IWJ2 1684 aa16.4■□□□□ 0.22
USP49-204ENST00000423567 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
USP49-204ENST00000423567 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
USP49-204ENST00000423567 SYNMO15061 1565 aa16.38■□□□□ 0.21
USP49-204ENST00000423567 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
USP49-204ENST00000423567 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
USP49-204ENST00000423567 TXNDC2Q86VQ3 553 aa16.36■□□□□ 0.21
USP49-204ENST00000423567 PIK3C2BO00750 1634 aa16.36■□□□□ 0.21
USP49-204ENST00000423567 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
USP49-204ENST00000423567 TMEM2Q9UHN6 1383 aa16.35■□□□□ 0.21
USP49-204ENST00000423567 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
USP49-204ENST00000423567 E9PCH4 1651 aa16.34■□□□□ 0.21
USP49-204ENST00000423567 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
USP49-204ENST00000423567 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
USP49-204ENST00000423567 FBXO41Q8TF61 875 aa16.34■□□□□ 0.21
USP49-204ENST00000423567 MED14O60244 1454 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms