RNA–Protein interactions for RNA: ENST00000423555.6

SMARCA2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-212ENST00000423555 REPIN1Q9BWE0 567 aaKnown RBP13.18□□□□□ -0.3
SMARCA2-212ENST00000423555 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
SMARCA2-212ENST00000423555 SUPT5HO00267 1087 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-212ENST00000423555 MS4A1P11836 297 aa13.14□□□□□ -0.31
SMARCA2-212ENST00000423555 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
SMARCA2-212ENST00000423555 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA2-212ENST00000423555 PHOX2BQ99453 314 aa13.13□□□□□ -0.31
SMARCA2-212ENST00000423555 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
SMARCA2-212ENST00000423555 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
SMARCA2-212ENST00000423555 FOSBP53539 338 aa13.11□□□□□ -0.31
SMARCA2-212ENST00000423555 FBXW7Q969H0 707 aa13.11□□□□□ -0.31
SMARCA2-212ENST00000423555 NUDT7P0C024 238 aa13.1□□□□□ -0.31
SMARCA2-212ENST00000423555 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-212ENST00000423555 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
SMARCA2-212ENST00000423555 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
SMARCA2-212ENST00000423555 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
SMARCA2-212ENST00000423555 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
SMARCA2-212ENST00000423555 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
SMARCA2-212ENST00000423555 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
SMARCA2-212ENST00000423555 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
SMARCA2-212ENST00000423555 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
SMARCA2-212ENST00000423555 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
SMARCA2-212ENST00000423555 CLCN1P35523 988 aa13.05□□□□□ -0.32
SMARCA2-212ENST00000423555 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
SMARCA2-212ENST00000423555 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
SMARCA2-212ENST00000423555 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
SMARCA2-212ENST00000423555 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-212ENST00000423555 METTL3Q86U44 580 aaKnown RBP13.02□□□□□ -0.33
SMARCA2-212ENST00000423555 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 ARXQ96QS3 562 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 ZMYND15Q9H091 742 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 ADGRG1Q9Y653 693 aa13.01□□□□□ -0.33
SMARCA2-212ENST00000423555 OATP04181 439 aa12.98□□□□□ -0.33
SMARCA2-212ENST00000423555 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
SMARCA2-212ENST00000423555 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
SMARCA2-212ENST00000423555 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
SMARCA2-212ENST00000423555 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
SMARCA2-212ENST00000423555 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-212ENST00000423555 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-212ENST00000423555 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
SMARCA2-212ENST00000423555 BEGAINQ9BUH8 593 aa12.95□□□□□ -0.34
SMARCA2-212ENST00000423555 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
SMARCA2-212ENST00000423555 PRSS12P56730 875 aa12.94□□□□□ -0.34
SMARCA2-212ENST00000423555 SH3D19Q5HYK7 790 aa12.94□□□□□ -0.34
SMARCA2-212ENST00000423555 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
SMARCA2-212ENST00000423555 RBM27Q9P2N5 1060 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-212ENST00000423555 COL9A1P20849 921 aa12.92□□□□□ -0.34
SMARCA2-212ENST00000423555 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
SMARCA2-212ENST00000423555 SCUBE2Q9NQ36 999 aa12.91□□□□□ -0.34
SMARCA2-212ENST00000423555 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
SMARCA2-212ENST00000423555 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
SMARCA2-212ENST00000423555 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-212ENST00000423555 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
SMARCA2-212ENST00000423555 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
SMARCA2-212ENST00000423555 FLIIQ13045 1269 aa12.87□□□□□ -0.35
SMARCA2-212ENST00000423555 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
SMARCA2-212ENST00000423555 PROCA1Q8NCQ7 364 aaPredicted RBP12.87□□□□□ -0.35
SMARCA2-212ENST00000423555 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
SMARCA2-212ENST00000423555 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
SMARCA2-212ENST00000423555 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
SMARCA2-212ENST00000423555 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
SMARCA2-212ENST00000423555 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
SMARCA2-212ENST00000423555 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
SMARCA2-212ENST00000423555 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
SMARCA2-212ENST00000423555 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
SMARCA2-212ENST00000423555 EYA1Q99502 592 aa12.83□□□□□ -0.36
SMARCA2-212ENST00000423555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-212ENST00000423555 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-212ENST00000423555 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
SMARCA2-212ENST00000423555 PTPREP23469 700 aa12.81□□□□□ -0.36
SMARCA2-212ENST00000423555 NUDT18Q6ZVK8 323 aa12.81□□□□□ -0.36
SMARCA2-212ENST00000423555 TBC1D2Q9BYX2 928 aa12.8□□□□□ -0.36
SMARCA2-212ENST00000423555 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-212ENST00000423555 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
SMARCA2-212ENST00000423555 CLK2P49760 499 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-212ENST00000423555 MCM6Q14566 821 aa12.77□□□□□ -0.37
SMARCA2-212ENST00000423555 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMARCA2-212ENST00000423555 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
SMARCA2-212ENST00000423555 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
SMARCA2-212ENST00000423555 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
SMARCA2-212ENST00000423555 TATDN2Q93075 761 aa12.76□□□□□ -0.37
SMARCA2-212ENST00000423555 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
SMARCA2-212ENST00000423555 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
SMARCA2-212ENST00000423555 SMAPO00193 183 aa12.74□□□□□ -0.37
SMARCA2-212ENST00000423555 SNPHO15079 494 aa12.74□□□□□ -0.37
SMARCA2-212ENST00000423555 CD46P15529 392 aa12.74□□□□□ -0.37
SMARCA2-212ENST00000423555 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
SMARCA2-212ENST00000423555 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
SMARCA2-212ENST00000423555 DDX11L8A8MPP1 907 aa12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 DNAJB2P25686 324 aa12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 FBXO31Q5XUX0 539 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
SMARCA2-212ENST00000423555 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
SMARCA2-212ENST00000423555 ARID3AQ99856 593 aa12.71□□□□□ -0.37
SMARCA2-212ENST00000423555 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
SMARCA2-212ENST00000423555 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms