RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 MRC2Q9UBG0 1479 aa4.8□□□□□ -1.64
TOP2A-201ENST00000423485 SIGLEC1Q9BZZ2 1709 aa4.8□□□□□ -1.64
TOP2A-201ENST00000423485 ADAMTS2O95450 1211 aa4.8□□□□□ -1.64
TOP2A-201ENST00000423485 PMFBP1Q8TBY8 1022 aa4.8□□□□□ -1.64
TOP2A-201ENST00000423485 ADGRG4Q8IZF6 3080 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 CCDC184Q52MB2 194 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 PHLDB1Q86UU1 1377 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 HMGXB3Q12766 1538 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 C8orf37Q96NL8 207 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 HOXD11P31277 338 aaPredicted RBP4.79□□□□□ -1.64
TOP2A-201ENST00000423485 CNKSR2Q8WXI2 1034 aa4.79□□□□□ -1.64
TOP2A-201ENST00000423485 CADPSQ9ULU8 1353 aa4.78□□□□□ -1.64
TOP2A-201ENST00000423485 NBEAQ8NFP9 2946 aa4.78□□□□□ -1.64
TOP2A-201ENST00000423485 SSFA2P28290 1259 aa4.78□□□□□ -1.64
TOP2A-201ENST00000423485 RRBP1Q9P2E9 1410 aaKnown RBP4.78□□□□□ -1.64
TOP2A-201ENST00000423485 ZNF330Q9Y3S2 320 aaPredicted RBP4.78□□□□□ -1.64
TOP2A-201ENST00000423485 SPATA31E1Q6ZUB1 1445 aa4.78□□□□□ -1.64
TOP2A-201ENST00000423485 TTLL12Q14166 644 aaPredicted RBP4.78□□□□□ -1.64
TOP2A-201ENST00000423485 ISY1Q9ULR0 285 aaKnown RBP4.78□□□□□ -1.64
TOP2A-201ENST00000423485 CSMD2Q7Z408 3487 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 TNIKQ9UKE5 1360 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 ZNF219Q9P2Y4 722 aaPredicted RBP4.77□□□□□ -1.65
TOP2A-201ENST00000423485 PKD2Q13563 968 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 TRIM34Q9BYJ4 488 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 KIF21AQ7Z4S6 1674 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 HDAC9Q9UKV0 1011 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 MSH6P52701 1360 aa4.77□□□□□ -1.65
TOP2A-201ENST00000423485 LMOD1P29536 600 aaPredicted RBP4.76□□□□□ -1.65
TOP2A-201ENST00000423485 SPAG9O60271 1321 aaKnown RBP4.76□□□□□ -1.65
TOP2A-201ENST00000423485 TMEM87AQ8NBN3 555 aa4.76□□□□□ -1.65
TOP2A-201ENST00000423485 BIN2Q9UBW5 565 aaPredicted RBP4.76□□□□□ -1.65
TOP2A-201ENST00000423485 GPBP1L1Q9HC44 474 aaPredicted RBP4.75□□□□□ -1.65
TOP2A-201ENST00000423485 EIF4E1BA6NMX2 242 aaKnown RBP4.75□□□□□ -1.65
TOP2A-201ENST00000423485 TXNDC2Q86VQ3 553 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 GOLGA3Q08378 1498 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 LRPPRCP42704 1394 aaKnown RBP4.75□□□□□ -1.65
TOP2A-201ENST00000423485 SPDYE4A6NLX3 237 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 GRIN3BO60391 1043 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 HSPA2P54652 639 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 CRBNQ96SW2 442 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 DMXL2Q8TDJ6 3036 aa4.75□□□□□ -1.65
TOP2A-201ENST00000423485 MINK1Q8N4C8 1332 aaPredicted RBP4.74□□□□□ -1.65
TOP2A-201ENST00000423485 AKNAQ7Z591 1439 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 FAM83GA6ND36 823 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 NF2P35240 595 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 MTUS2Q5JR59 1369 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 CSMD1Q96PZ7 3565 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 NCBP3Q53F19 620 aaKnown RBP4.74□□□□□ -1.65
TOP2A-201ENST00000423485 TSPYL2Q9H2G4 693 aaPredicted RBP4.74□□□□□ -1.65
TOP2A-201ENST00000423485 GPRASP1Q5JY77 1395 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 SUPT6HQ7KZ85 1726 aaKnown RBP4.74□□□□□ -1.65
TOP2A-201ENST00000423485 UHRF1BP1Q6BDS2 1440 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 CHD9Q3L8U1 2897 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 DPY19L2Q6NUT2 758 aa4.74□□□□□ -1.65
TOP2A-201ENST00000423485 RAD54L2Q9Y4B4 1467 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 PCF11O94913 1555 aaKnown RBP4.73□□□□□ -1.65
TOP2A-201ENST00000423485 CC2D2AQ9P2K1 1620 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 CDK11BP21127 795 aaKnown RBP4.73□□□□□ -1.65
TOP2A-201ENST00000423485 STRN4Q9NRL3 753 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 COL17A1Q9UMD9 1497 aaPredicted RBP4.73□□□□□ -1.65
TOP2A-201ENST00000423485 KIF3BO15066 747 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 CABP2Q9NPB3 220 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 ERCC6L2Q5T890 1561 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 TNS4Q8IZW8 715 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 IFT140Q96RY7 1462 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 KIF22Q14807 665 aa4.73□□□□□ -1.65
TOP2A-201ENST00000423485 TDRD9Q8NDG6 1382 aaKnown RBP4.73□□□□□ -1.65
TOP2A-201ENST00000423485 FBXW7Q969H0 707 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 POLA1P09884 1462 aaPredicted RBP4.72□□□□□ -1.65
TOP2A-201ENST00000423485 CADPS2Q86UW7 1296 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 ERICH3Q5RHP9 1530 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 SOX12O15370 315 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 CNGB1Q14028 1251 aaPredicted RBP4.72□□□□□ -1.65
TOP2A-201ENST00000423485 CCDC125Q86Z20 511 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 SPON1Q9HCB6 807 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 PRKAG2Q9UGJ0 569 aa4.72□□□□□ -1.65
TOP2A-201ENST00000423485 TRPC5Q9UL62 973 aaPredicted RBP4.72□□□□□ -1.65
TOP2A-201ENST00000423485 TMC1Q8TDI8 760 aa4.71□□□□□ -1.65
TOP2A-201ENST00000423485 LRRC59Q96AG4 307 aaKnown RBP4.71□□□□□ -1.65
TOP2A-201ENST00000423485 ZNF608Q9ULD9 1512 aaPredicted RBP4.71□□□□□ -1.66
TOP2A-201ENST00000423485 ZNF526Q8TF50 670 aaPredicted RBP4.71□□□□□ -1.66
TOP2A-201ENST00000423485 VPS8Q8N3P4 1428 aa4.71□□□□□ -1.66
TOP2A-201ENST00000423485 CHMP4AQ9BY43 222 aa4.71□□□□□ -1.66
TOP2A-201ENST00000423485 TMEM106CQ9BVX2 250 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 E9PCH4 1651 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 DISP1Q96F81 1524 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 USP35Q9P2H5 1018 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 PLA2R1Q13018 1463 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 FANCD2Q9BXW9 1451 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 QTRT2Q9H974 415 aaKnown RBP4.7□□□□□ -1.66
TOP2A-201ENST00000423485 ESCO1Q5FWF5 840 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 TIAM1Q13009 1591 aa4.7□□□□□ -1.66
TOP2A-201ENST00000423485 ASH1LQ9NR48 2969 aaKnown RBP4.7□□□□□ -1.66
TOP2A-201ENST00000423485 RBM27Q9P2N5 1060 aaKnown RBP4.7□□□□□ -1.66
TOP2A-201ENST00000423485 FRAT2O75474 233 aaPredicted RBP4.69□□□□□ -1.66
TOP2A-201ENST00000423485 TRIM26Q12899 539 aaPredicted RBP4.69□□□□□ -1.66
TOP2A-201ENST00000423485 NOL10Q9BSC4 688 aaKnown RBP4.69□□□□□ -1.66
TOP2A-201ENST00000423485 POLR1AO95602 1720 aaPredicted RBP4.69□□□□□ -1.66
TOP2A-201ENST00000423485 CCNB3Q8WWL7 1395 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 RSPH4AQ5TD94 716 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms