RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 ADGBQ8N7X0 1667 aa28.61■■■□□ 2.17
MCF2L-214ENST00000423251 NPATQ14207 1427 aa28.59■■■□□ 2.17
MCF2L-214ENST00000423251 ZMYM3Q14202 1370 aa28.58■■■□□ 2.17
MCF2L-214ENST00000423251 PTPRTO14522 1441 aa28.57■■■□□ 2.16
MCF2L-214ENST00000423251 CROCC2H7BZ55 1655 aa28.57■■■□□ 2.16
MCF2L-214ENST00000423251 NCOA1Q15788 1441 aa28.56■■■□□ 2.16
MCF2L-214ENST00000423251 CHIC2Q9UKJ5 165 aa28.55■■■□□ 2.16
MCF2L-214ENST00000423251 MYO3AQ8NEV4 1616 aa28.54■■■□□ 2.16
MCF2L-214ENST00000423251 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
MCF2L-214ENST00000423251 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
MCF2L-214ENST00000423251 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
MCF2L-214ENST00000423251 GGT6Q6P531 493 aa28.51■■■□□ 2.15
MCF2L-214ENST00000423251 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.15
MCF2L-214ENST00000423251 PTPRKQ15262 1439 aa28.5■■■□□ 2.15
MCF2L-214ENST00000423251 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
MCF2L-214ENST00000423251 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
MCF2L-214ENST00000423251 ITGAEP38570 1179 aa28.48■■■□□ 2.15
MCF2L-214ENST00000423251 LTBP4Q8N2S1 1624 aa28.47■■■□□ 2.15
MCF2L-214ENST00000423251 KIF3BO15066 747 aa28.46■■■□□ 2.15
MCF2L-214ENST00000423251 DUOX2Q9NRD8 1548 aa28.46■■■□□ 2.15
MCF2L-214ENST00000423251 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.15
MCF2L-214ENST00000423251 PPP6R1Q9UPN7 881 aa28.45■■■□□ 2.14
MCF2L-214ENST00000423251 ROCK1Q13464 1354 aa28.45■■■□□ 2.14
MCF2L-214ENST00000423251 ERBINQ96RT1 1412 aa28.39■■■□□ 2.14
MCF2L-214ENST00000423251 NCKAP5LQ9HCH0 1330 aa28.39■■■□□ 2.13
MCF2L-214ENST00000423251 PLA2R1Q13018 1463 aa28.37■■■□□ 2.13
MCF2L-214ENST00000423251 EIF2AK4Q9P2K8 1649 aaKnown RBP28.36■■■□□ 2.13
MCF2L-214ENST00000423251 KDM5DQ9BY66 1539 aa28.33■■■□□ 2.13
MCF2L-214ENST00000423251 ANKRD50Q9ULJ7 1429 aa28.32■■■□□ 2.12
MCF2L-214ENST00000423251 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
MCF2L-214ENST00000423251 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
MCF2L-214ENST00000423251 FAM135AQ9P2D6 1515 aa28.29■■■□□ 2.12
MCF2L-214ENST00000423251 ZNF335Q9H4Z2 1342 aaPredicted RBP28.28■■■□□ 2.12
MCF2L-214ENST00000423251 RNF17Q9BXT8 1623 aaKnown RBP28.28■■■□□ 2.12
MCF2L-214ENST00000423251 PZPP20742 1482 aa28.27■■■□□ 2.12
MCF2L-214ENST00000423251 WASHC2CQ9Y4E1 1318 aa28.27■■■□□ 2.12
MCF2L-214ENST00000423251 PKD2Q13563 968 aa28.27■■■□□ 2.12
MCF2L-214ENST00000423251 TNRQ92752 1358 aa28.24■■■□□ 2.11
MCF2L-214ENST00000423251 POLR1AO95602 1720 aaPredicted RBP28.24■■■□□ 2.11
MCF2L-214ENST00000423251 FBXO31Q5XUX0 539 aaPredicted RBP28.24■■■□□ 2.11
MCF2L-214ENST00000423251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.21■■■□□ 2.116e-7■■■□□ 15.9
MCF2L-214ENST00000423251 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
MCF2L-214ENST00000423251 NAIPQ13075 1403 aa28.19■■■□□ 2.1
MCF2L-214ENST00000423251 KANK1Q14678 1352 aa28.19■■■□□ 2.1
MCF2L-214ENST00000423251 NEURL4Q96JN8 1562 aa28.19■■■□□ 2.1
MCF2L-214ENST00000423251 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
MCF2L-214ENST00000423251 DEPDC5O75140 1603 aa28.18■■■□□ 2.1
MCF2L-214ENST00000423251 PRDM15P57071 1507 aaPredicted RBP28.18■■■□□ 2.1
MCF2L-214ENST00000423251 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
MCF2L-214ENST00000423251 ABCC3O15438 1527 aa28.15■■■□□ 2.1
MCF2L-214ENST00000423251 ZC3H13Q5T200 1668 aaKnown RBP28.15■■■□□ 2.1
MCF2L-214ENST00000423251 SPATA31D1Q6ZQQ2 1576 aa28.15■■■□□ 2.1
MCF2L-214ENST00000423251 NLRP1Q9C000 1473 aa28.11■■■□□ 2.09
MCF2L-214ENST00000423251 VWDEQ8N2E2 1590 aa28.11■■■□□ 2.09
MCF2L-214ENST00000423251 CEP152O94986 1710 aa28.1■■■□□ 2.09
MCF2L-214ENST00000423251 UGGT1Q9NYU2 1555 aa28.1■■■□□ 2.09
MCF2L-214ENST00000423251 UBAP1LF5GYI3 381 aa28.09■■■□□ 2.09
MCF2L-214ENST00000423251 GCC2Q8IWJ2 1684 aa28.09■■■□□ 2.09
MCF2L-214ENST00000423251 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.08
MCF2L-214ENST00000423251 UNC13BO14795 1591 aa28.07■■■□□ 2.08
MCF2L-214ENST00000423251 ARHGAP31Q2M1Z3 1444 aa28.06■■■□□ 2.08
MCF2L-214ENST00000423251 NUP155O75694 1391 aa28.05■■■□□ 2.08
MCF2L-214ENST00000423251 ILDR2Q71H61 639 aa28.04■■■□□ 2.08
MCF2L-214ENST00000423251 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
MCF2L-214ENST00000423251 CFAP65Q6ZU64 1925 aaKnown RBP28.02■■■□□ 2.08
MCF2L-214ENST00000423251 CPS1P31327 1500 aa28.02■■■□□ 2.08
MCF2L-214ENST00000423251 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
MCF2L-214ENST00000423251 SETD5Q9C0A6 1442 aa28.01■■■□□ 2.07
MCF2L-214ENST00000423251 ACIN1Q9UKV3 1341 aaKnown RBP28■■■□□ 2.07
MCF2L-214ENST00000423251 THEMISQ8N1K5 641 aaPredicted RBP28■■■□□ 2.07
MCF2L-214ENST00000423251 NPHP4O75161 1426 aaPredicted RBP28■■■□□ 2.07
MCF2L-214ENST00000423251 IQGAP1P46940 1657 aa27.99■■■□□ 2.07
MCF2L-214ENST00000423251 MED14O60244 1454 aa27.98■■■□□ 2.07
MCF2L-214ENST00000423251 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
MCF2L-214ENST00000423251 IQGAP3Q86VI3 1631 aa27.96■■■□□ 2.07
MCF2L-214ENST00000423251 UBR1Q8IWV7 1749 aa27.95■■■□□ 2.06
MCF2L-214ENST00000423251 EFCAB6Q5THR3 1501 aa27.94■■■□□ 2.06
MCF2L-214ENST00000423251 TET3O43151 1660 aa27.94■■■□□ 2.06
MCF2L-214ENST00000423251 TRIM26Q12899 539 aaPredicted RBP27.93■■■□□ 2.06
MCF2L-214ENST00000423251 RPRD2Q5VT52 1461 aaKnown RBP27.93■■■□□ 2.06
MCF2L-214ENST00000423251 HRCP23327 699 aa27.91■■■□□ 2.06
MCF2L-214ENST00000423251 STRCP1A6NGW2 1772 aa27.9■■■□□ 2.06
MCF2L-214ENST00000423251 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
MCF2L-214ENST00000423251 RAB3GAP2Q9H2M9 1393 aa27.88■■■□□ 2.05
MCF2L-214ENST00000423251 PIP4K2BP78356 416 aa27.87■■■□□ 2.05
MCF2L-214ENST00000423251 NOS1P29475 1434 aa27.86■■■□□ 2.05
MCF2L-214ENST00000423251 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
MCF2L-214ENST00000423251 ALKQ9UM73 1620 aa27.83■■■□□ 2.05
MCF2L-214ENST00000423251 SOCS7O14512 581 aa27.83■■■□□ 2.05
MCF2L-214ENST00000423251 TOM1O60784 492 aa27.83■■■□□ 2.05
MCF2L-214ENST00000423251 SCAF11Q99590 1463 aaKnown RBP27.83■■■□□ 2.04
MCF2L-214ENST00000423251 SYNMO15061 1565 aa27.82■■■□□ 2.04
MCF2L-214ENST00000423251 E9PCH4 1651 aa27.82■■■□□ 2.04
MCF2L-214ENST00000423251 PIK3C2BO00750 1634 aa27.81■■■□□ 2.04
MCF2L-214ENST00000423251 HSPA1LP34931 641 aa27.81■■■□□ 2.04
MCF2L-214ENST00000423251 SLC52A1Q9NWF4 448 aa27.81■■■□□ 2.04
MCF2L-214ENST00000423251 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
MCF2L-214ENST00000423251 SLIT1O75093 1534 aa27.79■■■□□ 2.04
MCF2L-214ENST00000423251 ARHGAP23Q9P227 1491 aa27.79■■■□□ 2.04
MCF2L-214ENST00000423251 LRRC7Q96NW7 1537 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms