RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 BECN2A8MW95 431 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 LETM1O95202 739 aaPredicted RBP11.38□□□□□ -0.59
CD109-202ENST00000422508 AMOTL1Q8IY63 956 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
CD109-202ENST00000422508 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
CD109-202ENST00000422508 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
CD109-202ENST00000422508 SF3A1Q15459 793 aaKnown RBP11.37□□□□□ -0.59
CD109-202ENST00000422508 CUX1P39880 1505 aa11.37□□□□□ -0.59
CD109-202ENST00000422508 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
CD109-202ENST00000422508 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
CD109-202ENST00000422508 USP8P40818 1118 aa11.36□□□□□ -0.59
CD109-202ENST00000422508 AKAP17AQ02040 695 aaKnown RBP11.36□□□□□ -0.59
CD109-202ENST00000422508 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
CD109-202ENST00000422508 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
CD109-202ENST00000422508 KIF15Q9NS87 1388 aa11.36□□□□□ -0.59
CD109-202ENST00000422508 RUFY2Q8WXA3 655 aa11.36□□□□□ -0.59
CD109-202ENST00000422508 TCEAL9Q9UHQ7 104 aa11.36□□□□□ -0.59
CD109-202ENST00000422508 SCAPERQ9BY12 1400 aa11.35□□□□□ -0.59
CD109-202ENST00000422508 ITPRIPQ8IWB1 547 aa11.35□□□□□ -0.59
CD109-202ENST00000422508 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
CD109-202ENST00000422508 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
CD109-202ENST00000422508 EIF4G1Q04637 1599 aaKnown RBP11.34□□□□□ -0.59
CD109-202ENST00000422508 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
CD109-202ENST00000422508 HMGN5P82970 282 aaKnown RBP11.34□□□□□ -0.59
CD109-202ENST00000422508 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
CD109-202ENST00000422508 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
CD109-202ENST00000422508 GSE1Q14687 1217 aa11.33□□□□□ -0.6
CD109-202ENST00000422508 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
CD109-202ENST00000422508 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
CD109-202ENST00000422508 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 SYNE3Q6ZMZ3 975 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 APPP05067 770 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
CD109-202ENST00000422508 TRIM29Q14134 588 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 IQCEQ6IPM2 695 aa11.32□□□□□ -0.6
CD109-202ENST00000422508 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 LUC7LQ9NQ29 371 aaKnown RBP11.31□□□□□ -0.6
CD109-202ENST00000422508 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 FAM184AQ8NB25 1140 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 RABEP1Q15276 862 aa11.31□□□□□ -0.6
CD109-202ENST00000422508 NEUROD2Q15784 382 aa11.3□□□□□ -0.6
CD109-202ENST00000422508 CCDC39Q9UFE4 941 aa11.3□□□□□ -0.6
CD109-202ENST00000422508 MARCH6O60337 910 aa11.3□□□□□ -0.6
CD109-202ENST00000422508 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
CD109-202ENST00000422508 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
CD109-202ENST00000422508 NUCB2P80303 420 aa11.3□□□□□ -0.6
CD109-202ENST00000422508 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
CD109-202ENST00000422508 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
CD109-202ENST00000422508 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
CD109-202ENST00000422508 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
CD109-202ENST00000422508 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
CD109-202ENST00000422508 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
CD109-202ENST00000422508 SRPK2P78362 688 aaKnown RBP11.29□□□□□ -0.6
CD109-202ENST00000422508 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
CD109-202ENST00000422508 STK11IPQ8N1F8 1099 aa11.29□□□□□ -0.6
CD109-202ENST00000422508 ZKSCAN1P17029 563 aaPredicted RBP11.28□□□□□ -0.6
CD109-202ENST00000422508 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
CD109-202ENST00000422508 GOLGA6L10A6NI86 522 aa11.28□□□□□ -0.6
CD109-202ENST00000422508 FEZ1Q99689 392 aa11.28□□□□□ -0.6
CD109-202ENST00000422508 H0YHG0 523 aa11.28□□□□□ -0.6
CD109-202ENST00000422508 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
CD109-202ENST00000422508 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
CD109-202ENST00000422508 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.6
CD109-202ENST00000422508 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.6
CD109-202ENST00000422508 HOMER1Q86YM7 354 aa11.27□□□□□ -0.6
CD109-202ENST00000422508 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.61
CD109-202ENST00000422508 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
CD109-202ENST00000422508 CCAR2Q8N163 923 aaKnown RBP11.27□□□□□ -0.61
CD109-202ENST00000422508 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
CD109-202ENST00000422508 WASHC2AQ641Q2 1341 aa11.26□□□□□ -0.61
CD109-202ENST00000422508 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
CD109-202ENST00000422508 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
CD109-202ENST00000422508 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
CD109-202ENST00000422508 FAM43AQ8N2R8 423 aa11.26□□□□□ -0.61
CD109-202ENST00000422508 EPS15P42566 896 aa11.25□□□□□ -0.61
CD109-202ENST00000422508 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
CD109-202ENST00000422508 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
CD109-202ENST00000422508 DDX49Q9Y6V7 483 aaKnown RBP11.25□□□□□ -0.61
CD109-202ENST00000422508 SMARCE1Q969G3 411 aa11.25□□□□□ -0.61
CD109-202ENST00000422508 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
CD109-202ENST00000422508 G3V3G9 751 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 CT47A1Q5JQC4 288 aaPredicted RBP11.24□□□□□ -0.61
CD109-202ENST00000422508 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
CD109-202ENST00000422508 SASS6Q6UVJ0 657 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 XBP1P17861 261 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 EIF3JO75822 258 aaKnown RBP11.24□□□□□ -0.61
CD109-202ENST00000422508 SUPT6HQ7KZ85 1726 aaKnown RBP11.24□□□□□ -0.61
CD109-202ENST00000422508 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
CD109-202ENST00000422508 KIAA0754O94854 1291 aa11.24□□□□□ -0.61
CD109-202ENST00000422508 MCM2P49736 904 aa11.23□□□□□ -0.61
CD109-202ENST00000422508 PDCP20941 246 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms