RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 MAP3K1Q13233 1512 aa29.84■■■□□ 2.37
AC004540.1-203ENST00000421862 RNF17Q9BXT8 1623 aaKnown RBP29.83■■■□□ 2.37
AC004540.1-203ENST00000421862 A2ML1A8K2U0 1454 aa29.83■■■□□ 2.37
AC004540.1-203ENST00000421862 PZPP20742 1482 aa29.81■■■□□ 2.36
AC004540.1-203ENST00000421862 RSPH4AQ5TD94 716 aa29.8■■■□□ 2.36
AC004540.1-203ENST00000421862 ZC3H13Q5T200 1668 aaKnown RBP29.79■■■□□ 2.36
AC004540.1-203ENST00000421862 EIF2AK4Q9P2K8 1649 aaKnown RBP29.79■■■□□ 2.36
AC004540.1-203ENST00000421862 PKD2Q13563 968 aa29.75■■■□□ 2.35
AC004540.1-203ENST00000421862 NEURL4Q96JN8 1562 aa29.75■■■□□ 2.35
AC004540.1-203ENST00000421862 NCKAP5LQ9HCH0 1330 aa29.73■■■□□ 2.35
AC004540.1-203ENST00000421862 MROH1Q8NDA8 1641 aa29.71■■■□□ 2.35
AC004540.1-203ENST00000421862 KIF3BO15066 747 aa29.71■■■□□ 2.35
AC004540.1-203ENST00000421862 CROCC2H7BZ55 1655 aa29.7■■■□□ 2.35
AC004540.1-203ENST00000421862 TNRQ92752 1358 aa29.7■■■□□ 2.35
AC004540.1-203ENST00000421862 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
AC004540.1-203ENST00000421862 MYOM3Q5VTT5 1437 aa29.68■■■□□ 2.34
AC004540.1-203ENST00000421862 ABCC3O15438 1527 aa29.67■■■□□ 2.34
AC004540.1-203ENST00000421862 ZNF335Q9H4Z2 1342 aaPredicted RBP29.67■■■□□ 2.34
AC004540.1-203ENST00000421862 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
AC004540.1-203ENST00000421862 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.34
AC004540.1-203ENST00000421862 CEP152O94986 1710 aa29.64■■■□□ 2.34
AC004540.1-203ENST00000421862 DEPDC5O75140 1603 aa29.63■■■□□ 2.33
AC004540.1-203ENST00000421862 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
AC004540.1-203ENST00000421862 TSPY4P0CV99 314 aa29.61■■■□□ 2.33
AC004540.1-203ENST00000421862 TSPY10P0CW01 314 aa29.61■■■□□ 2.33
AC004540.1-203ENST00000421862 FBXO31Q5XUX0 539 aaPredicted RBP29.61■■■□□ 2.33
AC004540.1-203ENST00000421862 WASHC2CQ9Y4E1 1318 aa29.6■■■□□ 2.33
AC004540.1-203ENST00000421862 UGGT1Q9NYU2 1555 aa29.6■■■□□ 2.33
AC004540.1-203ENST00000421862 KANK4Q5T7N3 995 aaPredicted RBP29.59■■■□□ 2.33
AC004540.1-203ENST00000421862 DUOX2Q9NRD8 1548 aa29.58■■■□□ 2.33
AC004540.1-203ENST00000421862 SHANK2Q9UPX8 1470 aa29.58■■■□□ 2.33
AC004540.1-203ENST00000421862 PRDM15P57071 1507 aaPredicted RBP29.56■■■□□ 2.32
AC004540.1-203ENST00000421862 PTPN23Q9H3S7 1636 aa29.56■■■□□ 2.32
AC004540.1-203ENST00000421862 CPS1P31327 1500 aa29.55■■■□□ 2.32
AC004540.1-203ENST00000421862 MED14O60244 1454 aa29.55■■■□□ 2.32
AC004540.1-203ENST00000421862 IQGAP1P46940 1657 aa29.54■■■□□ 2.32
AC004540.1-203ENST00000421862 VWDEQ8N2E2 1590 aa29.54■■■□□ 2.32
AC004540.1-203ENST00000421862 ERVK-7P63135 1459 aa29.54■■■□□ 2.32
AC004540.1-203ENST00000421862 UBR1Q8IWV7 1749 aa29.51■■■□□ 2.32
AC004540.1-203ENST00000421862 DISP3Q9P2K9 1392 aa29.5■■■□□ 2.31
AC004540.1-203ENST00000421862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.49■■■□□ 2.31
AC004540.1-203ENST00000421862 CFAP65Q6ZU64 1925 aaKnown RBP29.47■■■□□ 2.31
AC004540.1-203ENST00000421862 ERBINQ96RT1 1412 aa29.47■■■□□ 2.31
AC004540.1-203ENST00000421862 ABCC5O15440 1437 aa29.45■■■□□ 2.31
AC004540.1-203ENST00000421862 NPHP4O75161 1426 aaPredicted RBP29.44■■■□□ 2.3
AC004540.1-203ENST00000421862 STRCP1A6NGW2 1772 aa29.44■■■□□ 2.3
AC004540.1-203ENST00000421862 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
AC004540.1-203ENST00000421862 KIF15Q9NS87 1388 aa29.42■■■□□ 2.3
AC004540.1-203ENST00000421862 UBAP1LF5GYI3 381 aa29.42■■■□□ 2.3
AC004540.1-203ENST00000421862 SYNMO15061 1565 aa29.42■■■□□ 2.3
AC004540.1-203ENST00000421862 DAPK1P53355 1430 aa29.41■■■□□ 2.3
AC004540.1-203ENST00000421862 ARHGAP31Q2M1Z3 1444 aa29.41■■■□□ 2.3
AC004540.1-203ENST00000421862 FGD6Q6ZV73 1430 aa29.4■■■□□ 2.3
AC004540.1-203ENST00000421862 ANKLE2Q86XL3 938 aa29.4■■■□□ 2.3
AC004540.1-203ENST00000421862 ALKQ9UM73 1620 aa29.38■■■□□ 2.29
AC004540.1-203ENST00000421862 KDM5AP29375 1690 aaKnown RBP29.37■■■□□ 2.29
AC004540.1-203ENST00000421862 ILDR2Q71H61 639 aa29.36■■■□□ 2.29
AC004540.1-203ENST00000421862 SLIT1O75093 1534 aa29.35■■■□□ 2.29
AC004540.1-203ENST00000421862 ARHGAP23Q9P227 1491 aa29.35■■■□□ 2.29
AC004540.1-203ENST00000421862 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
AC004540.1-203ENST00000421862 PIK3C2BO00750 1634 aa29.33■■■□□ 2.29
AC004540.1-203ENST00000421862 SCAF11Q99590 1463 aaKnown RBP29.3■■■□□ 2.28
AC004540.1-203ENST00000421862 ADGRL2O95490 1459 aa29.27■■■□□ 2.28
AC004540.1-203ENST00000421862 LRRC7Q96NW7 1537 aa29.26■■■□□ 2.27
AC004540.1-203ENST00000421862 EFCAB6Q5THR3 1501 aa29.25■■■□□ 2.27
AC004540.1-203ENST00000421862 APLP2Q06481 763 aa29.25■■■□□ 2.27
AC004540.1-203ENST00000421862 XIRP1Q702N8 1843 aaKnown RBP29.24■■■□□ 2.27
AC004540.1-203ENST00000421862 RRP7BPQ9NSQ0 103 aa29.23■■■□□ 2.27
AC004540.1-203ENST00000421862 ANKRD30AQ9BXX3 1397 aa29.23■■■□□ 2.27
AC004540.1-203ENST00000421862 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
AC004540.1-203ENST00000421862 SOCS7O14512 581 aa29.21■■■□□ 2.27
AC004540.1-203ENST00000421862 TOM1O60784 492 aa29.21■■■□□ 2.27
AC004540.1-203ENST00000421862 KANK1Q14678 1352 aa29.19■■■□□ 2.26
AC004540.1-203ENST00000421862 ADGRB3O60242 1522 aa29.15■■■□□ 2.26
AC004540.1-203ENST00000421862 HSPA1LP34931 641 aa29.15■■■□□ 2.26
AC004540.1-203ENST00000421862 NOS1P29475 1434 aa29.14■■■□□ 2.26
AC004540.1-203ENST00000421862 LTKP29376 864 aa29.13■■■□□ 2.25
AC004540.1-203ENST00000421862 TMEM2Q9UHN6 1383 aa29.13■■■□□ 2.25
AC004540.1-203ENST00000421862 TET3O43151 1660 aa29.12■■■□□ 2.25
AC004540.1-203ENST00000421862 PIP4K2BP78356 416 aa29.12■■■□□ 2.25
AC004540.1-203ENST00000421862 SCAF1Q9H7N4 1312 aaKnown RBP29.11■■■□□ 2.25
AC004540.1-203ENST00000421862 GCC2Q8IWJ2 1684 aa29.11■■■□□ 2.25
AC004540.1-203ENST00000421862 UNC13BO14795 1591 aa29.09■■■□□ 2.25
AC004540.1-203ENST00000421862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.09■■■□□ 2.25
AC004540.1-203ENST00000421862 RPRD2Q5VT52 1461 aaKnown RBP29.09■■■□□ 2.25
AC004540.1-203ENST00000421862 MYO5BQ9ULV0 1848 aa29.08■■■□□ 2.25
AC004540.1-203ENST00000421862 CHIC2Q9UKJ5 165 aa29.08■■■□□ 2.25
AC004540.1-203ENST00000421862 TXNDC2Q86VQ3 553 aa29.06■■■□□ 2.24
AC004540.1-203ENST00000421862 NWD1Q149M9 1564 aa29.05■■■□□ 2.24
AC004540.1-203ENST00000421862 ANKRD50Q9ULJ7 1429 aa29.04■■■□□ 2.24
AC004540.1-203ENST00000421862 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
AC004540.1-203ENST00000421862 IDI1Q13907 227 aa29.01■■■□□ 2.23
AC004540.1-203ENST00000421862 E9PCH4 1651 aa28.98■■■□□ 2.23
AC004540.1-203ENST00000421862 TMEM131LA2VDJ0 1609 aa28.98■■■□□ 2.23
AC004540.1-203ENST00000421862 IQGAP3Q86VI3 1631 aa28.97■■■□□ 2.23
AC004540.1-203ENST00000421862 NKTRP30414 1462 aaKnown RBP28.96■■■□□ 2.23
AC004540.1-203ENST00000421862 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
AC004540.1-203ENST00000421862 STAG3Q9UJ98 1225 aa28.94■■■□□ 2.22
AC004540.1-203ENST00000421862 FAM50AQ14320 339 aaKnown RBP28.93■■■□□ 2.22
AC004540.1-203ENST00000421862 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms