RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
LINC00472-202ENST00000421704 KANK1Q14678 1352 aa21.99■■□□□ 1.11
LINC00472-202ENST00000421704 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
LINC00472-202ENST00000421704 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
LINC00472-202ENST00000421704 A2MP01023 1474 aa21.97■■□□□ 1.11
LINC00472-202ENST00000421704 PKD2Q13563 968 aa21.96■■□□□ 1.11
LINC00472-202ENST00000421704 PRDM15P57071 1507 aaPredicted RBP21.95■■□□□ 1.1
LINC00472-202ENST00000421704 RNF17Q9BXT8 1623 aaKnown RBP21.93■■□□□ 1.1
LINC00472-202ENST00000421704 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
LINC00472-202ENST00000421704 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
LINC00472-202ENST00000421704 ATP10AO60312 1499 aa21.9■■□□□ 1.1
LINC00472-202ENST00000421704 TSPOAP1O95153 1857 aa21.9■■□□□ 1.1
LINC00472-202ENST00000421704 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
LINC00472-202ENST00000421704 TET3O43151 1660 aa21.9■■□□□ 1.1
LINC00472-202ENST00000421704 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
LINC00472-202ENST00000421704 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
LINC00472-202ENST00000421704 DIP2CQ9Y2E4 1556 aa21.88■■□□□ 1.09
LINC00472-202ENST00000421704 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
LINC00472-202ENST00000421704 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
LINC00472-202ENST00000421704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.09
LINC00472-202ENST00000421704 KIF3BO15066 747 aa21.84■■□□□ 1.09
LINC00472-202ENST00000421704 RAPGEF3O95398 923 aa21.83■■□□□ 1.09
LINC00472-202ENST00000421704 FOXD1Q16676 465 aa21.83■■□□□ 1.09
LINC00472-202ENST00000421704 MROH1Q8NDA8 1641 aa21.83■■□□□ 1.08
LINC00472-202ENST00000421704 CCDC144AA2RUR9 1427 aa21.82■■□□□ 1.08
LINC00472-202ENST00000421704 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
LINC00472-202ENST00000421704 E9PCH4 1651 aa21.79■■□□□ 1.08
LINC00472-202ENST00000421704 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
LINC00472-202ENST00000421704 TRPM2O94759 1503 aa21.77■■□□□ 1.08
LINC00472-202ENST00000421704 AGLP35573 1532 aa21.77■■□□□ 1.08
LINC00472-202ENST00000421704 EFCAB6Q5THR3 1501 aa21.77■■□□□ 1.08
LINC00472-202ENST00000421704 DNAJC5Q9H3Z4 198 aa21.76■■□□□ 1.07
LINC00472-202ENST00000421704 NEURL4Q96JN8 1562 aa21.75■■□□□ 1.07
LINC00472-202ENST00000421704 PTPRTO14522 1441 aa21.75■■□□□ 1.07
LINC00472-202ENST00000421704 L3MBTL2Q969R5 705 aa21.75■■□□□ 1.07
LINC00472-202ENST00000421704 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
LINC00472-202ENST00000421704 STAC3Q96MF2 364 aa21.73■■□□□ 1.07
LINC00472-202ENST00000421704 ARHGEF40Q8TER5 1519 aa21.73■■□□□ 1.07
LINC00472-202ENST00000421704 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
LINC00472-202ENST00000421704 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
LINC00472-202ENST00000421704 CEP152O94986 1710 aa21.7■■□□□ 1.06
LINC00472-202ENST00000421704 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
LINC00472-202ENST00000421704 ABCC3O15438 1527 aa21.68■■□□□ 1.06
LINC00472-202ENST00000421704 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
LINC00472-202ENST00000421704 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
LINC00472-202ENST00000421704 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
LINC00472-202ENST00000421704 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.06
LINC00472-202ENST00000421704 GGT6Q6P531 493 aa21.64■■□□□ 1.05
LINC00472-202ENST00000421704 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
LINC00472-202ENST00000421704 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
LINC00472-202ENST00000421704 KIF1BO60333 1816 aa21.6■■□□□ 1.05
LINC00472-202ENST00000421704 CLTCL1P53675 1640 aa21.6■■□□□ 1.05
LINC00472-202ENST00000421704 RALGAPBQ86X10 1494 aa21.58■■□□□ 1.05
LINC00472-202ENST00000421704 NPATQ14207 1427 aa21.58■■□□□ 1.05
LINC00472-202ENST00000421704 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.05
LINC00472-202ENST00000421704 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
LINC00472-202ENST00000421704 TRHP20396 242 aaPredicted RBP21.56■■□□□ 1.04
LINC00472-202ENST00000421704 NOS1P29475 1434 aa21.55■■□□□ 1.04
LINC00472-202ENST00000421704 DCAF11Q8TEB1 546 aa21.54■■□□□ 1.04
LINC00472-202ENST00000421704 LAMC1P11047 1609 aa21.53■■□□□ 1.04
LINC00472-202ENST00000421704 NBPF8Q3BBV2 869 aa21.52■■□□□ 1.04
LINC00472-202ENST00000421704 PRAG1Q86YV5 1406 aa21.52■■□□□ 1.04
LINC00472-202ENST00000421704 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
LINC00472-202ENST00000421704 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
LINC00472-202ENST00000421704 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
LINC00472-202ENST00000421704 PREX1Q8TCU6 1659 aa21.49■■□□□ 1.03
LINC00472-202ENST00000421704 ADGRB3O60242 1522 aa21.49■■□□□ 1.03
LINC00472-202ENST00000421704 MYOM2P54296 1465 aa21.48■■□□□ 1.03
LINC00472-202ENST00000421704 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
LINC00472-202ENST00000421704 KIAA1210Q9ULL0 1709 aa21.46■■□□□ 1.03
LINC00472-202ENST00000421704 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
LINC00472-202ENST00000421704 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
LINC00472-202ENST00000421704 CLTCQ00610 1675 aaKnown RBP21.46■■□□□ 1.03
LINC00472-202ENST00000421704 IFT172Q9UG01 1749 aa21.46■■□□□ 1.03
LINC00472-202ENST00000421704 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
LINC00472-202ENST00000421704 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
LINC00472-202ENST00000421704 SIGLEC1Q9BZZ2 1709 aa21.44■■□□□ 1.02
LINC00472-202ENST00000421704 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
LINC00472-202ENST00000421704 GPRASP1Q5JY77 1395 aa21.44■■□□□ 1.02
LINC00472-202ENST00000421704 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
LINC00472-202ENST00000421704 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
LINC00472-202ENST00000421704 SYNMO15061 1565 aa21.43■■□□□ 1.02
LINC00472-202ENST00000421704 ROCK2O75116 1388 aaKnown RBP21.42■■□□□ 1.02
LINC00472-202ENST00000421704 ZNF326Q5BKZ1 582 aaKnown RBP21.42■■□□□ 1.02
LINC00472-202ENST00000421704 SPATA31D1Q6ZQQ2 1576 aa21.41■■□□□ 1.02
LINC00472-202ENST00000421704 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
LINC00472-202ENST00000421704 ERVK-7P63135 1459 aa21.4■■□□□ 1.02
LINC00472-202ENST00000421704 CARD11Q9BXL7 1154 aa21.4■■□□□ 1.02
LINC00472-202ENST00000421704 USP47Q96K76 1375 aa21.39■■□□□ 1.02
LINC00472-202ENST00000421704 UGGT1Q9NYU2 1555 aa21.39■■□□□ 1.01
LINC00472-202ENST00000421704 PPLO60437 1756 aa21.37■■□□□ 1.01
LINC00472-202ENST00000421704 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
LINC00472-202ENST00000421704 CFAP65Q6ZU64 1925 aaKnown RBP21.35■■□□□ 1.01
LINC00472-202ENST00000421704 KDM5AP29375 1690 aaKnown RBP21.34■■□□□ 1.01
LINC00472-202ENST00000421704 ZFYVE9O95405 1425 aa21.33■■□□□ 1.01
LINC00472-202ENST00000421704 SLC24A1O60721 1099 aa21.33■■□□□ 1.01
LINC00472-202ENST00000421704 TMEM131LA2VDJ0 1609 aa21.32■■□□□ 1
LINC00472-202ENST00000421704 ZMYM3Q14202 1370 aa21.32■■□□□ 1
LINC00472-202ENST00000421704 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
LINC00472-202ENST00000421704 SETBP1Q9Y6X0 1596 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms