RNA–Protein interactions for RNA: ENST00000421604.1

AP001116.1-201, humanhuman

TSL 3 BASIC

Gene AP001116.1, Length 762 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001116.1-201ENST00000421604 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
AP001116.1-201ENST00000421604 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
AP001116.1-201ENST00000421604 ZNF644Q9H582 1327 aaPredicted RBP13□□□□□ -0.33
AP001116.1-201ENST00000421604 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
AP001116.1-201ENST00000421604 KIDINS220Q9ULH0 1771 aa12.99□□□□□ -0.33
AP001116.1-201ENST00000421604 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
AP001116.1-201ENST00000421604 DIP2CQ9Y2E4 1556 aa12.99□□□□□ -0.33
AP001116.1-201ENST00000421604 ATP7AQ04656 1500 aa12.99□□□□□ -0.33
AP001116.1-201ENST00000421604 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
AP001116.1-201ENST00000421604 PPARGC1BQ86YN6 1023 aaKnown RBP12.98□□□□□ -0.33
AP001116.1-201ENST00000421604 MAST1Q9Y2H9 1570 aa12.97□□□□□ -0.33
AP001116.1-201ENST00000421604 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
AP001116.1-201ENST00000421604 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.33
AP001116.1-201ENST00000421604 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.33
AP001116.1-201ENST00000421604 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.34
AP001116.1-201ENST00000421604 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
AP001116.1-201ENST00000421604 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
AP001116.1-201ENST00000421604 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
AP001116.1-201ENST00000421604 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
AP001116.1-201ENST00000421604 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
AP001116.1-201ENST00000421604 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
AP001116.1-201ENST00000421604 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
AP001116.1-201ENST00000421604 DAPK1P53355 1430 aa12.94□□□□□ -0.34
AP001116.1-201ENST00000421604 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
AP001116.1-201ENST00000421604 SIGLEC1Q9BZZ2 1709 aa12.93□□□□□ -0.34
AP001116.1-201ENST00000421604 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
AP001116.1-201ENST00000421604 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
AP001116.1-201ENST00000421604 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
AP001116.1-201ENST00000421604 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
AP001116.1-201ENST00000421604 ATP10AO60312 1499 aa12.91□□□□□ -0.34
AP001116.1-201ENST00000421604 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
AP001116.1-201ENST00000421604 ABCC5O15440 1437 aa12.9□□□□□ -0.34
AP001116.1-201ENST00000421604 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
AP001116.1-201ENST00000421604 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
AP001116.1-201ENST00000421604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
AP001116.1-201ENST00000421604 BCORL1Q5H9F3 1711 aa12.89□□□□□ -0.35
AP001116.1-201ENST00000421604 A2MP01023 1474 aa12.88□□□□□ -0.35
AP001116.1-201ENST00000421604 AGLP35573 1532 aa12.88□□□□□ -0.35
AP001116.1-201ENST00000421604 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
AP001116.1-201ENST00000421604 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
AP001116.1-201ENST00000421604 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
AP001116.1-201ENST00000421604 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
AP001116.1-201ENST00000421604 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
AP001116.1-201ENST00000421604 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
AP001116.1-201ENST00000421604 ADAMTSL3P82987 1691 aa12.84□□□□□ -0.35
AP001116.1-201ENST00000421604 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
AP001116.1-201ENST00000421604 KIF15Q9NS87 1388 aa12.83□□□□□ -0.36
AP001116.1-201ENST00000421604 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
AP001116.1-201ENST00000421604 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
AP001116.1-201ENST00000421604 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
AP001116.1-201ENST00000421604 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
AP001116.1-201ENST00000421604 ERBINQ96RT1 1412 aa12.81□□□□□ -0.36
AP001116.1-201ENST00000421604 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
AP001116.1-201ENST00000421604 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
AP001116.1-201ENST00000421604 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
AP001116.1-201ENST00000421604 RIMS1Q86UR5 1692 aaKnown RBP12.8□□□□□ -0.36
AP001116.1-201ENST00000421604 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
AP001116.1-201ENST00000421604 ROCK1Q13464 1354 aa12.8□□□□□ -0.36
AP001116.1-201ENST00000421604 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
AP001116.1-201ENST00000421604 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
AP001116.1-201ENST00000421604 CHIC2Q9UKJ5 165 aa12.78□□□□□ -0.36
AP001116.1-201ENST00000421604 PRDM15P57071 1507 aaPredicted RBP12.78□□□□□ -0.36
AP001116.1-201ENST00000421604 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.36
AP001116.1-201ENST00000421604 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
AP001116.1-201ENST00000421604 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.36
AP001116.1-201ENST00000421604 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
AP001116.1-201ENST00000421604 ITGAEP38570 1179 aa12.77□□□□□ -0.37
AP001116.1-201ENST00000421604 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
AP001116.1-201ENST00000421604 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
AP001116.1-201ENST00000421604 KDM5DQ9BY66 1539 aa12.76□□□□□ -0.37
AP001116.1-201ENST00000421604 HAX1O00165 279 aa12.75□□□□□ -0.37
AP001116.1-201ENST00000421604 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
AP001116.1-201ENST00000421604 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
AP001116.1-201ENST00000421604 UNC13BO14795 1591 aa12.74□□□□□ -0.37
AP001116.1-201ENST00000421604 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
AP001116.1-201ENST00000421604 MLECQ14165 292 aa12.74□□□□□ -0.37
AP001116.1-201ENST00000421604 CEP152O94986 1710 aa12.74□□□□□ -0.37
AP001116.1-201ENST00000421604 CNTLNQ9NXG0 1405 aa12.73□□□□□ -0.37
AP001116.1-201ENST00000421604 KDM4FA0A1W2PPD8 638 aa12.73□□□□□ -0.37
AP001116.1-201ENST00000421604 PTPRMP28827 1452 aa12.72□□□□□ -0.37
AP001116.1-201ENST00000421604 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
AP001116.1-201ENST00000421604 KIF3BO15066 747 aa12.72□□□□□ -0.37
AP001116.1-201ENST00000421604 C3P01024 1663 aa12.72□□□□□ -0.37
AP001116.1-201ENST00000421604 ABCC3O15438 1527 aa12.72□□□□□ -0.37
AP001116.1-201ENST00000421604 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.37
AP001116.1-201ENST00000421604 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
AP001116.1-201ENST00000421604 NAIPQ13075 1403 aa12.71□□□□□ -0.38
AP001116.1-201ENST00000421604 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
AP001116.1-201ENST00000421604 GGT6Q6P531 493 aa12.69□□□□□ -0.38
AP001116.1-201ENST00000421604 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
AP001116.1-201ENST00000421604 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
AP001116.1-201ENST00000421604 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
AP001116.1-201ENST00000421604 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
AP001116.1-201ENST00000421604 KANK1Q14678 1352 aa12.67□□□□□ -0.38
AP001116.1-201ENST00000421604 EFCAB6Q5THR3 1501 aa12.67□□□□□ -0.38
AP001116.1-201ENST00000421604 LMTK2Q8IWU2 1503 aa12.67□□□□□ -0.38
AP001116.1-201ENST00000421604 TET3O43151 1660 aa12.66□□□□□ -0.38
AP001116.1-201ENST00000421604 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
AP001116.1-201ENST00000421604 PZPP20742 1482 aa12.65□□□□□ -0.38
AP001116.1-201ENST00000421604 PREX1Q8TCU6 1659 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms