RNA–Protein interactions for RNA: ENST00000421503.6

CCDC117-202, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2 BASIC

Gene CCDC117, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-202ENST00000421503 CUL7Q14999 1698 aa18.55■□□□□ 0.56
CCDC117-202ENST00000421503 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
CCDC117-202ENST00000421503 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
CCDC117-202ENST00000421503 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
CCDC117-202ENST00000421503 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
CCDC117-202ENST00000421503 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
CCDC117-202ENST00000421503 ROCK1Q13464 1354 aa18.53■□□□□ 0.56
CCDC117-202ENST00000421503 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
CCDC117-202ENST00000421503 CDCA8Q53HL2 280 aa18.51■□□□□ 0.55
CCDC117-202ENST00000421503 TROQ12816 1431 aaPredicted RBP18.51■□□□□ 0.55
CCDC117-202ENST00000421503 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
CCDC117-202ENST00000421503 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
CCDC117-202ENST00000421503 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
CCDC117-202ENST00000421503 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
CCDC117-202ENST00000421503 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
CCDC117-202ENST00000421503 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CCDC117-202ENST00000421503 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
CCDC117-202ENST00000421503 BCAR3O75815 825 aa18.46■□□□□ 0.55
CCDC117-202ENST00000421503 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
CCDC117-202ENST00000421503 MS4A1P11836 297 aa18.46■□□□□ 0.55
CCDC117-202ENST00000421503 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
CCDC117-202ENST00000421503 KIF3BO15066 747 aa18.45■□□□□ 0.54
CCDC117-202ENST00000421503 DENND4BO75064 1496 aaPredicted RBP18.45■□□□□ 0.54
CCDC117-202ENST00000421503 NFKBIBQ15653 356 aa18.45■□□□□ 0.54
CCDC117-202ENST00000421503 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
CCDC117-202ENST00000421503 CTTNBP2Q8WZ74 1663 aa18.45■□□□□ 0.54
CCDC117-202ENST00000421503 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
CCDC117-202ENST00000421503 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
CCDC117-202ENST00000421503 PTPRGP23470 1445 aa18.44■□□□□ 0.54
CCDC117-202ENST00000421503 FAM161AQ3B820 660 aa18.43■□□□□ 0.54
CCDC117-202ENST00000421503 CENPQQ7L2Z9 268 aaPredicted RBP18.43■□□□□ 0.54
CCDC117-202ENST00000421503 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
CCDC117-202ENST00000421503 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
CCDC117-202ENST00000421503 TEX14Q8IWB6 1497 aa18.42■□□□□ 0.54
CCDC117-202ENST00000421503 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
CCDC117-202ENST00000421503 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
CCDC117-202ENST00000421503 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
CCDC117-202ENST00000421503 GZF1Q9H116 711 aaPredicted RBP18.41■□□□□ 0.54
CCDC117-202ENST00000421503 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
CCDC117-202ENST00000421503 BECN1Q14457 450 aa18.41■□□□□ 0.54
CCDC117-202ENST00000421503 GSE1Q14687 1217 aa18.4■□□□□ 0.54
CCDC117-202ENST00000421503 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
CCDC117-202ENST00000421503 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
CCDC117-202ENST00000421503 HSP90AA1P07900 732 aaKnown RBP18.4■□□□□ 0.54
CCDC117-202ENST00000421503 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
CCDC117-202ENST00000421503 GGT6Q6P531 493 aa18.39■□□□□ 0.54
CCDC117-202ENST00000421503 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
CCDC117-202ENST00000421503 KIAA0586Q9BVV6 1533 aa18.38■□□□□ 0.53
CCDC117-202ENST00000421503 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
CCDC117-202ENST00000421503 PZPP20742 1482 aa18.38■□□□□ 0.53
CCDC117-202ENST00000421503 KDM5BQ9UGL1 1544 aa18.38■□□□□ 0.53
CCDC117-202ENST00000421503 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
CCDC117-202ENST00000421503 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC117-202ENST00000421503 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
CCDC117-202ENST00000421503 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
CCDC117-202ENST00000421503 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
CCDC117-202ENST00000421503 STK26Q9P289 416 aa18.37■□□□□ 0.53
CCDC117-202ENST00000421503 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
CCDC117-202ENST00000421503 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
CCDC117-202ENST00000421503 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
CCDC117-202ENST00000421503 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
CCDC117-202ENST00000421503 CFAP53Q96M91 514 aa18.33■□□□□ 0.53
CCDC117-202ENST00000421503 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.52
CCDC117-202ENST00000421503 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
CCDC117-202ENST00000421503 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
CCDC117-202ENST00000421503 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
CCDC117-202ENST00000421503 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
CCDC117-202ENST00000421503 TMEM132EQ6IEE7 984 aa18.3■□□□□ 0.52
CCDC117-202ENST00000421503 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
CCDC117-202ENST00000421503 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
CCDC117-202ENST00000421503 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
CCDC117-202ENST00000421503 WDR62O43379 1518 aa18.29■□□□□ 0.52
CCDC117-202ENST00000421503 E9PSI1 815 aa18.28■□□□□ 0.52
CCDC117-202ENST00000421503 TESK2Q96S53 571 aa18.28■□□□□ 0.52
CCDC117-202ENST00000421503 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
CCDC117-202ENST00000421503 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
CCDC117-202ENST00000421503 ITPRIPQ8IWB1 547 aa18.26■□□□□ 0.51
CCDC117-202ENST00000421503 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
CCDC117-202ENST00000421503 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
CCDC117-202ENST00000421503 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
CCDC117-202ENST00000421503 LRPPRCP42704 1394 aaKnown RBP18.24■□□□□ 0.51
CCDC117-202ENST00000421503 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
CCDC117-202ENST00000421503 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
CCDC117-202ENST00000421503 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
CCDC117-202ENST00000421503 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
CCDC117-202ENST00000421503 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
CCDC117-202ENST00000421503 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
CCDC117-202ENST00000421503 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCDC117-202ENST00000421503 RALGAPBQ86X10 1494 aa18.22■□□□□ 0.51
CCDC117-202ENST00000421503 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
CCDC117-202ENST00000421503 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
CCDC117-202ENST00000421503 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
CCDC117-202ENST00000421503 KANK1Q14678 1352 aa18.21■□□□□ 0.51
CCDC117-202ENST00000421503 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.51
CCDC117-202ENST00000421503 IGHDP01880 384 aa18.21■□□□□ 0.51
CCDC117-202ENST00000421503 DISP1Q96F81 1524 aa18.21■□□□□ 0.51
CCDC117-202ENST00000421503 ABCA5Q8WWZ7 1642 aa18.21■□□□□ 0.51
CCDC117-202ENST00000421503 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
CCDC117-202ENST00000421503 ARHGAP5Q13017 1502 aa18.21■□□□□ 0.5
CCDC117-202ENST00000421503 PLEKHH2Q8IVE3 1493 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms