RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
AC012560.1-202ENST00000421324 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
AC012560.1-202ENST00000421324 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.46
AC012560.1-202ENST00000421324 EFCAB3Q8N7B9 438 aa12.2□□□□□ -0.46
AC012560.1-202ENST00000421324 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
AC012560.1-202ENST00000421324 TSPOAP1O95153 1857 aa12.19□□□□□ -0.46
AC012560.1-202ENST00000421324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
AC012560.1-202ENST00000421324 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
AC012560.1-202ENST00000421324 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
AC012560.1-202ENST00000421324 CD109Q6YHK3 1445 aa12.18□□□□□ -0.46
AC012560.1-202ENST00000421324 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
AC012560.1-202ENST00000421324 MAMSTRQ6ZN01 415 aa12.17□□□□□ -0.46
AC012560.1-202ENST00000421324 BCL11BQ9C0K0 894 aaPredicted RBP12.17□□□□□ -0.46
AC012560.1-202ENST00000421324 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
AC012560.1-202ENST00000421324 KDM6BO15054 1643 aa12.14□□□□□ -0.47
AC012560.1-202ENST00000421324 MAP3K4Q9Y6R4 1608 aa12.14□□□□□ -0.47
AC012560.1-202ENST00000421324 CLIP1P30622 1438 aa12.13□□□□□ -0.47
AC012560.1-202ENST00000421324 STK25O00506 426 aa12.13□□□□□ -0.47
AC012560.1-202ENST00000421324 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
AC012560.1-202ENST00000421324 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
AC012560.1-202ENST00000421324 SOX12O15370 315 aa12.12□□□□□ -0.47
AC012560.1-202ENST00000421324 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
AC012560.1-202ENST00000421324 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
AC012560.1-202ENST00000421324 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
AC012560.1-202ENST00000421324 LOC105371045A0A1W2PR82 267 aa12.1□□□□□ -0.47
AC012560.1-202ENST00000421324 PPRC1Q5VV67 1664 aaKnown RBP12.1□□□□□ -0.47
AC012560.1-202ENST00000421324 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
AC012560.1-202ENST00000421324 PHLDB1Q86UU1 1377 aa12.08□□□□□ -0.48
AC012560.1-202ENST00000421324 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
AC012560.1-202ENST00000421324 CASKIN1Q8WXD9 1431 aa12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 COL17A1Q9UMD9 1497 aaPredicted RBP12.07□□□□□ -0.48
AC012560.1-202ENST00000421324 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
AC012560.1-202ENST00000421324 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
AC012560.1-202ENST00000421324 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
AC012560.1-202ENST00000421324 MFRPQ9BY79 579 aa12.04□□□□□ -0.48
AC012560.1-202ENST00000421324 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
AC012560.1-202ENST00000421324 NEO1Q92859 1461 aa12.02□□□□□ -0.48
AC012560.1-202ENST00000421324 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
AC012560.1-202ENST00000421324 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
AC012560.1-202ENST00000421324 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
AC012560.1-202ENST00000421324 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC012560.1-202ENST00000421324 RAPGEF3O95398 923 aa12.01□□□□□ -0.49
AC012560.1-202ENST00000421324 NLRP6P59044 892 aa12.01□□□□□ -0.49
AC012560.1-202ENST00000421324 EFCAB2Q5VUJ9 269 aa12.01□□□□□ -0.49
AC012560.1-202ENST00000421324 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
AC012560.1-202ENST00000421324 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
AC012560.1-202ENST00000421324 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
AC012560.1-202ENST00000421324 PCF11O94913 1555 aaKnown RBP12□□□□□ -0.49
AC012560.1-202ENST00000421324 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
AC012560.1-202ENST00000421324 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
AC012560.1-202ENST00000421324 PLCH2O75038 1416 aa11.99□□□□□ -0.49
AC012560.1-202ENST00000421324 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
AC012560.1-202ENST00000421324 FANCAO15360 1455 aa11.99□□□□□ -0.49
AC012560.1-202ENST00000421324 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
AC012560.1-202ENST00000421324 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
AC012560.1-202ENST00000421324 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.49
AC012560.1-202ENST00000421324 DENND4BO75064 1496 aaPredicted RBP11.96□□□□□ -0.49
AC012560.1-202ENST00000421324 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
AC012560.1-202ENST00000421324 KIF14Q15058 1648 aa11.96□□□□□ -0.5
AC012560.1-202ENST00000421324 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
AC012560.1-202ENST00000421324 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
AC012560.1-202ENST00000421324 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
AC012560.1-202ENST00000421324 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
AC012560.1-202ENST00000421324 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
AC012560.1-202ENST00000421324 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
AC012560.1-202ENST00000421324 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
AC012560.1-202ENST00000421324 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
AC012560.1-202ENST00000421324 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
AC012560.1-202ENST00000421324 ARID4BQ4LE39 1312 aaPredicted RBP11.91□□□□□ -0.5
AC012560.1-202ENST00000421324 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
AC012560.1-202ENST00000421324 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
AC012560.1-202ENST00000421324 MYO5CQ9NQX4 1742 aa11.91□□□□□ -0.5
AC012560.1-202ENST00000421324 G3V3G9 751 aa11.9□□□□□ -0.5
AC012560.1-202ENST00000421324 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
AC012560.1-202ENST00000421324 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
AC012560.1-202ENST00000421324 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
AC012560.1-202ENST00000421324 AFAP1Q8N556 730 aa11.89□□□□□ -0.51
AC012560.1-202ENST00000421324 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
AC012560.1-202ENST00000421324 PPP1R37O75864 691 aa11.87□□□□□ -0.51
AC012560.1-202ENST00000421324 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
AC012560.1-202ENST00000421324 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
AC012560.1-202ENST00000421324 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
AC012560.1-202ENST00000421324 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
AC012560.1-202ENST00000421324 TMEM92Q6UXU6 159 aa11.85□□□□□ -0.51
AC012560.1-202ENST00000421324 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
AC012560.1-202ENST00000421324 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
AC012560.1-202ENST00000421324 HNRNPMP52272 730 aaKnown RBP eCLIP11.84□□□□□ -0.51
AC012560.1-202ENST00000421324 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
AC012560.1-202ENST00000421324 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
AC012560.1-202ENST00000421324 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
AC012560.1-202ENST00000421324 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
AC012560.1-202ENST00000421324 ZFYVE16Q7Z3T8 1539 aa11.83□□□□□ -0.52
AC012560.1-202ENST00000421324 YEATS2Q9ULM3 1422 aa11.83□□□□□ -0.52
AC012560.1-202ENST00000421324 ATP10AO60312 1499 aa11.82□□□□□ -0.52
AC012560.1-202ENST00000421324 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
AC012560.1-202ENST00000421324 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms