RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
CLCN4-203ENST00000421085 FAM43AQ8N2R8 423 aa15.28■□□□□ 0.04
CLCN4-203ENST00000421085 CCAR2Q8N163 923 aaKnown RBP15.28■□□□□ 0.04
CLCN4-203ENST00000421085 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
CLCN4-203ENST00000421085 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
CLCN4-203ENST00000421085 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.04
CLCN4-203ENST00000421085 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.27■□□□□ 0.03
CLCN4-203ENST00000421085 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
CLCN4-203ENST00000421085 SF3A1Q15459 793 aaKnown RBP15.26■□□□□ 0.03
CLCN4-203ENST00000421085 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
CLCN4-203ENST00000421085 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
CLCN4-203ENST00000421085 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
CLCN4-203ENST00000421085 NUP155O75694 1391 aa15.25■□□□□ 0.03
CLCN4-203ENST00000421085 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
CLCN4-203ENST00000421085 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
CLCN4-203ENST00000421085 NFKBIBQ15653 356 aa15.25■□□□□ 0.03
CLCN4-203ENST00000421085 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
CLCN4-203ENST00000421085 PDE4CQ08493 712 aa15.24■□□□□ 0.03
CLCN4-203ENST00000421085 BECN2A8MW95 431 aa15.24■□□□□ 0.03
CLCN4-203ENST00000421085 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
CLCN4-203ENST00000421085 COG6Q9Y2V7 657 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 GPS2Q13227 327 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 RASSF8Q8NHQ8 419 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 GORABQ5T7V8 394 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
CLCN4-203ENST00000421085 H3BQV1 296 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CLCN4-203ENST00000421085 RILPL2Q969X0 211 aa15.22■□□□□ 0.03
CLCN4-203ENST00000421085 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
CLCN4-203ENST00000421085 CUX2O14529 1486 aa15.22■□□□□ 0.03
CLCN4-203ENST00000421085 ANO8Q9HCE9 1232 aaPredicted RBP15.22■□□□□ 0.03
CLCN4-203ENST00000421085 CHMP3Q9Y3E7 222 aa15.21■□□□□ 0.03
CLCN4-203ENST00000421085 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
CLCN4-203ENST00000421085 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
CLCN4-203ENST00000421085 TEX35Q5T0J7 233 aa15.2■□□□□ 0.02
CLCN4-203ENST00000421085 E9PSI1 815 aa15.19■□□□□ 0.02
CLCN4-203ENST00000421085 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
CLCN4-203ENST00000421085 PES1O00541 588 aaKnown RBP15.19■□□□□ 0.02
CLCN4-203ENST00000421085 PANK3Q9H999 370 aa15.19■□□□□ 0.02
CLCN4-203ENST00000421085 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
CLCN4-203ENST00000421085 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
CLCN4-203ENST00000421085 FAM184AQ8NB25 1140 aa15.18■□□□□ 0.02
CLCN4-203ENST00000421085 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
CLCN4-203ENST00000421085 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
CLCN4-203ENST00000421085 TPD52L1Q16890 204 aaPredicted RBP15.17■□□□□ 0.02
CLCN4-203ENST00000421085 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
CLCN4-203ENST00000421085 HDAC5Q9UQL6 1122 aa15.17■□□□□ 0.02
CLCN4-203ENST00000421085 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
CLCN4-203ENST00000421085 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
CLCN4-203ENST00000421085 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 GGT6Q6P531 493 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 ANKRD30AQ9BXX3 1397 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
CLCN4-203ENST00000421085 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 PKNOX2Q96KN3 472 aa15.16■□□□□ 0.02
CLCN4-203ENST00000421085 MRE11P49959 708 aa15.15■□□□□ 0.02
CLCN4-203ENST00000421085 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
CLCN4-203ENST00000421085 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
CLCN4-203ENST00000421085 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
CLCN4-203ENST00000421085 PATL2C9JE40 543 aaKnown RBP15.14■□□□□ 0.01
CLCN4-203ENST00000421085 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
CLCN4-203ENST00000421085 TAF7LQ5H9L4 462 aa15.14■□□□□ 0.01
CLCN4-203ENST00000421085 CCDC70Q6NSX1 233 aa15.14■□□□□ 0.01
CLCN4-203ENST00000421085 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
CLCN4-203ENST00000421085 TPM1P09493 284 aa15.13■□□□□ 0.01
CLCN4-203ENST00000421085 REC8O95072 547 aa15.12■□□□□ 0.01
CLCN4-203ENST00000421085 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
CLCN4-203ENST00000421085 MLECQ14165 292 aa15.12■□□□□ 0.01
CLCN4-203ENST00000421085 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
CLCN4-203ENST00000421085 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 APAF1O14727 1248 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 NUCB2P80303 420 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 C22orf23Q9BZE7 217 aa15.11■□□□□ 0.01
CLCN4-203ENST00000421085 BCL11BQ9C0K0 894 aaPredicted RBP15.11■□□□□ 0.01
CLCN4-203ENST00000421085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
CLCN4-203ENST00000421085 MTERF4Q7Z6M4 381 aaKnown RBP15.1■□□□□ 0.01
CLCN4-203ENST00000421085 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
CLCN4-203ENST00000421085 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
CLCN4-203ENST00000421085 DDX19BQ9UMR2 479 aa15.1■□□□□ 0.01
CLCN4-203ENST00000421085 TPM2P07951 284 aa15.09■□□□□ 0.01
CLCN4-203ENST00000421085 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
CLCN4-203ENST00000421085 DIAPH3Q9NSV4 1193 aa15.08■□□□□ 0
CLCN4-203ENST00000421085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.08■□□□□ 0
CLCN4-203ENST00000421085 TRAK2O60296 914 aa15.08■□□□□ 0
CLCN4-203ENST00000421085 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
CLCN4-203ENST00000421085 ARGLU1Q9NWB6 273 aaPredicted RBP15.07■□□□□ 0
CLCN4-203ENST00000421085 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
CLCN4-203ENST00000421085 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
CLCN4-203ENST00000421085 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
CLCN4-203ENST00000421085 NOM1Q5C9Z4 860 aaKnown RBP15.07■□□□□ 0
CLCN4-203ENST00000421085 USP47Q96K76 1375 aa15.06■□□□□ 0
CLCN4-203ENST00000421085 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
CLCN4-203ENST00000421085 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
CLCN4-203ENST00000421085 RBM10P98175 930 aaKnown RBP15.06■□□□□ 0
CLCN4-203ENST00000421085 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms