RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
ITSN1-215ENST00000420666 FBXO31Q5XUX0 539 aaPredicted RBP23.35■■□□□ 1.33
ITSN1-215ENST00000420666 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
ITSN1-215ENST00000420666 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
ITSN1-215ENST00000420666 TNRQ92752 1358 aa23.33■■□□□ 1.33
ITSN1-215ENST00000420666 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
ITSN1-215ENST00000420666 FAM135AQ9P2D6 1515 aa23.31■■□□□ 1.32
ITSN1-215ENST00000420666 ARHGEF5Q12774 1597 aa23.3■■□□□ 1.32
ITSN1-215ENST00000420666 PZPP20742 1482 aa23.3■■□□□ 1.32
ITSN1-215ENST00000420666 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
ITSN1-215ENST00000420666 KDM5DQ9BY66 1539 aa23.28■■□□□ 1.32
ITSN1-215ENST00000420666 DISP3Q9P2K9 1392 aa23.28■■□□□ 1.32
ITSN1-215ENST00000420666 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
ITSN1-215ENST00000420666 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
ITSN1-215ENST00000420666 MAP3K1Q13233 1512 aa23.25■■□□□ 1.31
ITSN1-215ENST00000420666 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
ITSN1-215ENST00000420666 THEMISQ8N1K5 641 aaPredicted RBP23.24■■□□□ 1.31
ITSN1-215ENST00000420666 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
ITSN1-215ENST00000420666 NLRP1Q9C000 1473 aa23.2■■□□□ 1.3
ITSN1-215ENST00000420666 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
ITSN1-215ENST00000420666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.19■■□□□ 1.3
ITSN1-215ENST00000420666 ILDR2Q71H61 639 aa23.19■■□□□ 1.3
ITSN1-215ENST00000420666 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
ITSN1-215ENST00000420666 ABCC3O15438 1527 aa23.13■■□□□ 1.29
ITSN1-215ENST00000420666 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
ITSN1-215ENST00000420666 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
ITSN1-215ENST00000420666 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
ITSN1-215ENST00000420666 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
ITSN1-215ENST00000420666 APLP2Q06481 763 aa23.12■■□□□ 1.29
ITSN1-215ENST00000420666 CPS1P31327 1500 aa23.11■■□□□ 1.29
ITSN1-215ENST00000420666 MED14O60244 1454 aa23.11■■□□□ 1.29
ITSN1-215ENST00000420666 NPHP4O75161 1426 aaPredicted RBP23.1■■□□□ 1.29
ITSN1-215ENST00000420666 TOM1O60784 492 aa23.1■■□□□ 1.29
ITSN1-215ENST00000420666 SOCS7O14512 581 aa23.09■■□□□ 1.29
ITSN1-215ENST00000420666 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
ITSN1-215ENST00000420666 ERVK-7P63135 1459 aa23.08■■□□□ 1.29
ITSN1-215ENST00000420666 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.29
ITSN1-215ENST00000420666 EIF2AK4Q9P2K8 1649 aaKnown RBP23.08■■□□□ 1.28
ITSN1-215ENST00000420666 KIF15Q9NS87 1388 aa23.07■■□□□ 1.28
ITSN1-215ENST00000420666 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
ITSN1-215ENST00000420666 ABCC5O15440 1437 aa23.07■■□□□ 1.28
ITSN1-215ENST00000420666 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
ITSN1-215ENST00000420666 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
ITSN1-215ENST00000420666 MROH1Q8NDA8 1641 aa23.04■■□□□ 1.28
ITSN1-215ENST00000420666 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
ITSN1-215ENST00000420666 PIP4K2BP78356 416 aa23.03■■□□□ 1.28
ITSN1-215ENST00000420666 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
ITSN1-215ENST00000420666 VWDEQ8N2E2 1590 aa23.02■■□□□ 1.28
ITSN1-215ENST00000420666 ARHGAP31Q2M1Z3 1444 aa23.02■■□□□ 1.28
ITSN1-215ENST00000420666 ERBINQ96RT1 1412 aa23.02■■□□□ 1.28
ITSN1-215ENST00000420666 HSPA1LP34931 641 aa23.01■■□□□ 1.27
ITSN1-215ENST00000420666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.27
ITSN1-215ENST00000420666 DAPK1P53355 1430 aa22.99■■□□□ 1.27
ITSN1-215ENST00000420666 FGD6Q6ZV73 1430 aa22.98■■□□□ 1.27
ITSN1-215ENST00000420666 PTPN23Q9H3S7 1636 aa22.97■■□□□ 1.27
ITSN1-215ENST00000420666 TXNDC2Q86VQ3 553 aa22.97■■□□□ 1.27
ITSN1-215ENST00000420666 KANK1Q14678 1352 aa22.96■■□□□ 1.27
ITSN1-215ENST00000420666 LTKP29376 864 aa22.95■■□□□ 1.26
ITSN1-215ENST00000420666 PRDM15P57071 1507 aaPredicted RBP22.95■■□□□ 1.26
ITSN1-215ENST00000420666 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
ITSN1-215ENST00000420666 CHIC2Q9UKJ5 165 aa22.95■■□□□ 1.26
ITSN1-215ENST00000420666 IQGAP1P46940 1657 aa22.93■■□□□ 1.26
ITSN1-215ENST00000420666 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
ITSN1-215ENST00000420666 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
ITSN1-215ENST00000420666 ARHGAP23Q9P227 1491 aa22.92■■□□□ 1.26
ITSN1-215ENST00000420666 CEP152O94986 1710 aa22.92■■□□□ 1.26
ITSN1-215ENST00000420666 LRRC7Q96NW7 1537 aa22.91■■□□□ 1.26
ITSN1-215ENST00000420666 SLIT1O75093 1534 aa22.9■■□□□ 1.26
ITSN1-215ENST00000420666 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
ITSN1-215ENST00000420666 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
ITSN1-215ENST00000420666 CROCC2H7BZ55 1655 aa22.88■■□□□ 1.25
ITSN1-215ENST00000420666 IDI1Q13907 227 aa22.88■■□□□ 1.25
ITSN1-215ENST00000420666 TMEM2Q9UHN6 1383 aa22.88■■□□□ 1.25
ITSN1-215ENST00000420666 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
ITSN1-215ENST00000420666 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
ITSN1-215ENST00000420666 ALKQ9UM73 1620 aa22.86■■□□□ 1.25
ITSN1-215ENST00000420666 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
ITSN1-215ENST00000420666 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
ITSN1-215ENST00000420666 ADGRL2O95490 1459 aa22.81■■□□□ 1.24
ITSN1-215ENST00000420666 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
ITSN1-215ENST00000420666 NOS1P29475 1434 aa22.81■■□□□ 1.24
ITSN1-215ENST00000420666 SYNMO15061 1565 aa22.8■■□□□ 1.24
ITSN1-215ENST00000420666 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
ITSN1-215ENST00000420666 EFCAB6Q5THR3 1501 aa22.78■■□□□ 1.24
ITSN1-215ENST00000420666 MED1Q15648 1581 aaPredicted RBP22.78■■□□□ 1.24
ITSN1-215ENST00000420666 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
ITSN1-215ENST00000420666 KCNA6P17658 529 aa22.77■■□□□ 1.24
ITSN1-215ENST00000420666 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
ITSN1-215ENST00000420666 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
ITSN1-215ENST00000420666 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
ITSN1-215ENST00000420666 KDM5AP29375 1690 aaKnown RBP22.72■■□□□ 1.23
ITSN1-215ENST00000420666 TMEM94Q12767 1356 aa22.71■■□□□ 1.23
ITSN1-215ENST00000420666 RPRD2Q5VT52 1461 aaKnown RBP22.71■■□□□ 1.23
ITSN1-215ENST00000420666 PROSER2Q86WR7 435 aaPredicted RBP22.7■■□□□ 1.22
ITSN1-215ENST00000420666 TET3O43151 1660 aa22.69■■□□□ 1.22
ITSN1-215ENST00000420666 ADGRB3O60242 1522 aa22.68■■□□□ 1.22
ITSN1-215ENST00000420666 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
ITSN1-215ENST00000420666 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
ITSN1-215ENST00000420666 BCANQ96GW7 911 aa22.68■■□□□ 1.22
ITSN1-215ENST00000420666 ROCK1Q13464 1354 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms