RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 GGT6Q6P531 493 aa33.07■■■□□ 2.88
CPNE1-211ENST00000420363 PPP6R1Q9UPN7 881 aa33.05■■■□□ 2.88
CPNE1-211ENST00000420363 DUOX2Q9NRD8 1548 aa33.04■■■□□ 2.88
CPNE1-211ENST00000420363 PTPRTO14522 1441 aa33.03■■■□□ 2.88
CPNE1-211ENST00000420363 NPATQ14207 1427 aa33.03■■■□□ 2.88
CPNE1-211ENST00000420363 RNF17Q9BXT8 1623 aaKnown RBP33.03■■■□□ 2.88
CPNE1-211ENST00000420363 CLTCQ00610 1675 aaKnown RBP33.03■■■□□ 2.88
CPNE1-211ENST00000420363 KDM5DQ9BY66 1539 aa32.97■■■□□ 2.87
CPNE1-211ENST00000420363 ADGRL2O95490 1459 aa32.97■■■□□ 2.87
CPNE1-211ENST00000420363 KIF15Q9NS87 1388 aa32.96■■■□□ 2.87
CPNE1-211ENST00000420363 ERBINQ96RT1 1412 aa32.96■■■□□ 2.87
CPNE1-211ENST00000420363 NCOA1Q15788 1441 aa32.95■■■□□ 2.87
CPNE1-211ENST00000420363 KIF3BO15066 747 aa32.95■■■□□ 2.87
CPNE1-211ENST00000420363 ZC3H13Q5T200 1668 aaKnown RBP32.92■■■□□ 2.86
CPNE1-211ENST00000420363 FAM50AQ14320 339 aaKnown RBP32.92■■■□□ 2.86
CPNE1-211ENST00000420363 ANKRD30AQ9BXX3 1397 aa32.92■■■□□ 2.86
CPNE1-211ENST00000420363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.92■■■□□ 2.867e-10■■□□□ 13.2
CPNE1-211ENST00000420363 MROH1Q8NDA8 1641 aa32.9■■■□□ 2.86
CPNE1-211ENST00000420363 CAMSAP1Q5T5Y3 1602 aa32.89■■■□□ 2.86
CPNE1-211ENST00000420363 PTPRKQ15262 1439 aa32.88■■■□□ 2.85
CPNE1-211ENST00000420363 NCKAP5LQ9HCH0 1330 aa32.87■■■□□ 2.85
CPNE1-211ENST00000420363 PRDM15P57071 1507 aaPredicted RBP32.87■■■□□ 2.85
CPNE1-211ENST00000420363 DEPDC5O75140 1603 aa32.85■■■□□ 2.85
CPNE1-211ENST00000420363 PPARGC1BQ86YN6 1023 aaKnown RBP32.82■■■□□ 2.84
CPNE1-211ENST00000420363 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.84
CPNE1-211ENST00000420363 ABCC3O15438 1527 aa32.82■■■□□ 2.84
CPNE1-211ENST00000420363 PKD2Q13563 968 aa32.81■■■□□ 2.84
CPNE1-211ENST00000420363 RRP7BPQ9NSQ0 103 aa32.81■■■□□ 2.84
CPNE1-211ENST00000420363 PZPP20742 1482 aa32.8■■■□□ 2.84
CPNE1-211ENST00000420363 CHIC2Q9UKJ5 165 aa32.78■■■□□ 2.84
CPNE1-211ENST00000420363 WASHC2CQ9Y4E1 1318 aa32.77■■■□□ 2.84
CPNE1-211ENST00000420363 LTBP4Q8N2S1 1624 aa32.77■■■□□ 2.84
CPNE1-211ENST00000420363 MYO3AQ8NEV4 1616 aa32.77■■■□□ 2.84
CPNE1-211ENST00000420363 ROCK1Q13464 1354 aa32.77■■■□□ 2.84
CPNE1-211ENST00000420363 ZNF142P52746 1687 aaPredicted RBP32.77■■■□□ 2.84
CPNE1-211ENST00000420363 CEP170BQ9Y4F5 1589 aaPredicted RBP32.75■■■□□ 2.83
CPNE1-211ENST00000420363 PLA2R1Q13018 1463 aa32.74■■■□□ 2.83
CPNE1-211ENST00000420363 CEP152O94986 1710 aa32.74■■■□□ 2.83
CPNE1-211ENST00000420363 FBXO31Q5XUX0 539 aaPredicted RBP32.71■■■□□ 2.83
CPNE1-211ENST00000420363 ZNF335Q9H4Z2 1342 aaPredicted RBP32.7■■■□□ 2.82
CPNE1-211ENST00000420363 VWDEQ8N2E2 1590 aa32.7■■■□□ 2.82
CPNE1-211ENST00000420363 ANKRD50Q9ULJ7 1429 aa32.69■■■□□ 2.82
CPNE1-211ENST00000420363 IQSEC2Q5JU85 1478 aa32.69■■■□□ 2.82
CPNE1-211ENST00000420363 A2ML1A8K2U0 1454 aa32.68■■■□□ 2.82
CPNE1-211ENST00000420363 TNRQ92752 1358 aa32.67■■■□□ 2.82
CPNE1-211ENST00000420363 LMTK2Q8IWU2 1503 aa32.66■■■□□ 2.82
CPNE1-211ENST00000420363 SPATA31D1Q6ZQQ2 1576 aa32.65■■■□□ 2.82
CPNE1-211ENST00000420363 KANK1Q14678 1352 aa32.64■■■□□ 2.82
CPNE1-211ENST00000420363 ARHGAP31Q2M1Z3 1444 aa32.63■■■□□ 2.81
CPNE1-211ENST00000420363 UNC13BO14795 1591 aa32.62■■■□□ 2.81
CPNE1-211ENST00000420363 DISP3Q9P2K9 1392 aa32.6■■■□□ 2.81
CPNE1-211ENST00000420363 ERVK-7P63135 1459 aa32.59■■■□□ 2.81
CPNE1-211ENST00000420363 NLRP1Q9C000 1473 aa32.57■■■□□ 2.8
CPNE1-211ENST00000420363 UBAP1LF5GYI3 381 aa32.57■■■□□ 2.8
CPNE1-211ENST00000420363 THEMISQ8N1K5 641 aaPredicted RBP32.55■■■□□ 2.8
CPNE1-211ENST00000420363 EFCAB6Q5THR3 1501 aa32.55■■■□□ 2.8
CPNE1-211ENST00000420363 ANKLE2Q86XL3 938 aa32.53■■■□□ 2.8
CPNE1-211ENST00000420363 ITGAEP38570 1179 aa32.52■■■□□ 2.8
CPNE1-211ENST00000420363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.51■■■□□ 2.793e-9■□□□□ 9.4
CPNE1-211ENST00000420363 GCC2Q8IWJ2 1684 aa32.5■■■□□ 2.79
CPNE1-211ENST00000420363 TET3O43151 1660 aa32.5■■■□□ 2.79
CPNE1-211ENST00000420363 IQGAP3Q86VI3 1631 aa32.47■■■□□ 2.79
CPNE1-211ENST00000420363 RPRD2Q5VT52 1461 aaKnown RBP32.46■■■□□ 2.79
CPNE1-211ENST00000420363 UGGT1Q9NYU2 1555 aa32.43■■■□□ 2.78
CPNE1-211ENST00000420363 CFAP65Q6ZU64 1925 aaKnown RBP32.43■■■□□ 2.78
CPNE1-211ENST00000420363 ILDR2Q71H61 639 aa32.41■■■□□ 2.78
CPNE1-211ENST00000420363 NAIPQ13075 1403 aa32.41■■■□□ 2.78
CPNE1-211ENST00000420363 POLR1AO95602 1720 aaPredicted RBP32.4■■■□□ 2.78
CPNE1-211ENST00000420363 HFM1A2PYH4 1435 aa32.39■■■□□ 2.78
CPNE1-211ENST00000420363 NEURL4Q96JN8 1562 aa32.39■■■□□ 2.78
CPNE1-211ENST00000420363 NOS1P29475 1434 aa32.37■■■□□ 2.77
CPNE1-211ENST00000420363 UBR1Q8IWV7 1749 aa32.36■■■□□ 2.77
CPNE1-211ENST00000420363 SYNMO15061 1565 aa32.36■■■□□ 2.77
CPNE1-211ENST00000420363 KDM5AP29375 1690 aaKnown RBP32.35■■■□□ 2.77
CPNE1-211ENST00000420363 NPHP4O75161 1426 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-211ENST00000420363 CPS1P31327 1500 aa32.34■■■□□ 2.77
CPNE1-211ENST00000420363 SCAF1Q9H7N4 1312 aaKnown RBP32.33■■■□□ 2.77
CPNE1-211ENST00000420363 TOM1O60784 492 aa32.33■■■□□ 2.77
CPNE1-211ENST00000420363 E9PCH4 1651 aa32.32■■■□□ 2.76
CPNE1-211ENST00000420363 MED14O60244 1454 aa32.3■■■□□ 2.76
CPNE1-211ENST00000420363 PIK3C2BO00750 1634 aa32.3■■■□□ 2.76
CPNE1-211ENST00000420363 PIP4K2BP78356 416 aa32.3■■■□□ 2.76
CPNE1-211ENST00000420363 NUP155O75694 1391 aa32.3■■■□□ 2.76
CPNE1-211ENST00000420363 SOCS7O14512 581 aa32.26■■■□□ 2.75
CPNE1-211ENST00000420363 ADGRB3O60242 1522 aa32.23■■■□□ 2.75
CPNE1-211ENST00000420363 SLIT1O75093 1534 aa32.23■■■□□ 2.75
CPNE1-211ENST00000420363 ARHGAP23Q9P227 1491 aa32.22■■■□□ 2.75
CPNE1-211ENST00000420363 HSPA1LP34931 641 aa32.2■■■□□ 2.75
CPNE1-211ENST00000420363 SLC52A1Q9NWF4 448 aa32.2■■■□□ 2.75
CPNE1-211ENST00000420363 IQGAP1P46940 1657 aa32.2■■■□□ 2.74
CPNE1-211ENST00000420363 TXNDC2Q86VQ3 553 aa32.18■■■□□ 2.74
CPNE1-211ENST00000420363 SPHKAPQ2M3C7 1700 aa32.14■■■□□ 2.74
CPNE1-211ENST00000420363 IDI1Q13907 227 aa32.14■■■□□ 2.74
CPNE1-211ENST00000420363 STAG3Q9UJ98 1225 aa32.14■■■□□ 2.74
CPNE1-211ENST00000420363 EID1Q9Y6B2 187 aa32.14■■■□□ 2.74
CPNE1-211ENST00000420363 LTKP29376 864 aa32.13■■■□□ 2.73
CPNE1-211ENST00000420363 SCAF11Q99590 1463 aaKnown RBP32.13■■■□□ 2.73
CPNE1-211ENST00000420363 TMEM2Q9UHN6 1383 aa32.1■■■□□ 2.73
CPNE1-211ENST00000420363 TMEM131LA2VDJ0 1609 aa32.09■■■□□ 2.73
CPNE1-211ENST00000420363 LRRC7Q96NW7 1537 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms