RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 MYO3AQ8NEV4 1616 aa23.63■■□□□ 1.37
RARA-205ENST00000420042 MAST1Q9Y2H9 1570 aa23.63■■□□□ 1.37
RARA-205ENST00000420042 FAM135AQ9P2D6 1515 aa23.63■■□□□ 1.37
RARA-205ENST00000420042 NCKAP5LQ9HCH0 1330 aa23.62■■□□□ 1.37
RARA-205ENST00000420042 FBXO31Q5XUX0 539 aaPredicted RBP23.62■■□□□ 1.37
RARA-205ENST00000420042 CEP170BQ9Y4F5 1589 aaPredicted RBP23.61■■□□□ 1.37
RARA-205ENST00000420042 PKD2Q13563 968 aa23.6■■□□□ 1.37
RARA-205ENST00000420042 TNRQ92752 1358 aa23.59■■□□□ 1.37
RARA-205ENST00000420042 PZPP20742 1482 aa23.59■■□□□ 1.37
RARA-205ENST00000420042 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
RARA-205ENST00000420042 PLA2R1Q13018 1463 aa23.58■■□□□ 1.37
RARA-205ENST00000420042 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
RARA-205ENST00000420042 PTPN23Q9H3S7 1636 aa23.54■■□□□ 1.36
RARA-205ENST00000420042 ABCC5O15440 1437 aa23.53■■□□□ 1.36
RARA-205ENST00000420042 DUOX2Q9NRD8 1548 aa23.53■■□□□ 1.36
RARA-205ENST00000420042 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
RARA-205ENST00000420042 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
RARA-205ENST00000420042 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
RARA-205ENST00000420042 RNF17Q9BXT8 1623 aaKnown RBP23.51■■□□□ 1.35
RARA-205ENST00000420042 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
RARA-205ENST00000420042 SHANK2Q9UPX8 1470 aa23.51■■□□□ 1.35
RARA-205ENST00000420042 DNMT1P26358 1616 aaKnown RBP23.51■■□□□ 1.35
RARA-205ENST00000420042 KIF15Q9NS87 1388 aa23.51■■□□□ 1.35
RARA-205ENST00000420042 DAPK1P53355 1430 aa23.5■■□□□ 1.35
RARA-205ENST00000420042 ABCC3O15438 1527 aa23.49■■□□□ 1.35
RARA-205ENST00000420042 LTBP4Q8N2S1 1624 aa23.48■■□□□ 1.35
RARA-205ENST00000420042 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
RARA-205ENST00000420042 NLRP1Q9C000 1473 aa23.48■■□□□ 1.35
RARA-205ENST00000420042 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
RARA-205ENST00000420042 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
RARA-205ENST00000420042 ERBINQ96RT1 1412 aa23.46■■□□□ 1.35
RARA-205ENST00000420042 CHIC2Q9UKJ5 165 aa23.45■■□□□ 1.34
RARA-205ENST00000420042 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
RARA-205ENST00000420042 ANKLE2Q86XL3 938 aa23.44■■□□□ 1.34
RARA-205ENST00000420042 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
RARA-205ENST00000420042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
RARA-205ENST00000420042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.349e-7■□□□□ 9.1
RARA-205ENST00000420042 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
RARA-205ENST00000420042 FAM50AQ14320 339 aaKnown RBP23.42■■□□□ 1.34
RARA-205ENST00000420042 UGGT1Q9NYU2 1555 aa23.42■■□□□ 1.34
RARA-205ENST00000420042 IQSEC2Q5JU85 1478 aa23.42■■□□□ 1.34
RARA-205ENST00000420042 ERVK-7P63135 1459 aa23.4■■□□□ 1.34
RARA-205ENST00000420042 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
RARA-205ENST00000420042 KANK1Q14678 1352 aa23.39■■□□□ 1.33
RARA-205ENST00000420042 PRDM15P57071 1507 aaPredicted RBP23.37■■□□□ 1.33
RARA-205ENST00000420042 CEP152O94986 1710 aa23.36■■□□□ 1.33
RARA-205ENST00000420042 ARHGAP31Q2M1Z3 1444 aa23.34■■□□□ 1.33
RARA-205ENST00000420042 POLR1AO95602 1720 aaPredicted RBP23.34■■□□□ 1.33
RARA-205ENST00000420042 NEURL4Q96JN8 1562 aa23.33■■□□□ 1.33
RARA-205ENST00000420042 NPHP4O75161 1426 aaPredicted RBP23.32■■□□□ 1.32
RARA-205ENST00000420042 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
RARA-205ENST00000420042 MED14O60244 1454 aa23.3■■□□□ 1.32
RARA-205ENST00000420042 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
RARA-205ENST00000420042 ADGRL2O95490 1459 aa23.29■■□□□ 1.32
RARA-205ENST00000420042 CFAP65Q6ZU64 1925 aaKnown RBP23.26■■□□□ 1.31
RARA-205ENST00000420042 CPS1P31327 1500 aa23.25■■□□□ 1.31
RARA-205ENST00000420042 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
RARA-205ENST00000420042 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
RARA-205ENST00000420042 LMTK2Q8IWU2 1503 aa23.24■■□□□ 1.31
RARA-205ENST00000420042 TXNDC2Q86VQ3 553 aa23.22■■□□□ 1.31
RARA-205ENST00000420042 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
RARA-205ENST00000420042 VWDEQ8N2E2 1590 aa23.22■■□□□ 1.31
RARA-205ENST00000420042 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
RARA-205ENST00000420042 UBR1Q8IWV7 1749 aa23.22■■□□□ 1.31
RARA-205ENST00000420042 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
RARA-205ENST00000420042 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
RARA-205ENST00000420042 TOM1O60784 492 aa23.18■■□□□ 1.3
RARA-205ENST00000420042 LTKP29376 864 aa23.18■■□□□ 1.3
RARA-205ENST00000420042 IDI1Q13907 227 aa23.18■■□□□ 1.3
RARA-205ENST00000420042 SLIT1O75093 1534 aa23.17■■□□□ 1.3
RARA-205ENST00000420042 ARHGAP23Q9P227 1491 aa23.17■■□□□ 1.3
RARA-205ENST00000420042 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
RARA-205ENST00000420042 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
RARA-205ENST00000420042 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
RARA-205ENST00000420042 TMEM2Q9UHN6 1383 aa23.15■■□□□ 1.3
RARA-205ENST00000420042 ITGAEP38570 1179 aa23.15■■□□□ 1.3
RARA-205ENST00000420042 ROCK1Q13464 1354 aa23.14■■□□□ 1.3
RARA-205ENST00000420042 DISP3Q9P2K9 1392 aa23.14■■□□□ 1.3
RARA-205ENST00000420042 PIP4K2BP78356 416 aa23.14■■□□□ 1.29
RARA-205ENST00000420042 SLC52A1Q9NWF4 448 aa23.14■■□□□ 1.29
RARA-205ENST00000420042 NOS1P29475 1434 aa23.14■■□□□ 1.29
RARA-205ENST00000420042 RPRD2Q5VT52 1461 aaKnown RBP23.11■■□□□ 1.29
RARA-205ENST00000420042 SYNMO15061 1565 aa23.1■■□□□ 1.29
RARA-205ENST00000420042 KDM5AP29375 1690 aaKnown RBP23.07■■□□□ 1.28
RARA-205ENST00000420042 LRRC7Q96NW7 1537 aa23.07■■□□□ 1.28
RARA-205ENST00000420042 TET3O43151 1660 aa23.05■■□□□ 1.28
RARA-205ENST00000420042 UNC13BO14795 1591 aa23.05■■□□□ 1.28
RARA-205ENST00000420042 ADGRB3O60242 1522 aa23.04■■□□□ 1.28
RARA-205ENST00000420042 BCANQ96GW7 911 aa23.04■■□□□ 1.28
RARA-205ENST00000420042 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
RARA-205ENST00000420042 NUP155O75694 1391 aa23.02■■□□□ 1.28
RARA-205ENST00000420042 HSPA1LP34931 641 aa23.02■■□□□ 1.28
RARA-205ENST00000420042 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
RARA-205ENST00000420042 SLC26A8Q96RN1 970 aa23.01■■□□□ 1.27
RARA-205ENST00000420042 CHGAP10645 457 aaKnown RBP23■■□□□ 1.27
RARA-205ENST00000420042 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
RARA-205ENST00000420042 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
RARA-205ENST00000420042 KCNA6P17658 529 aa22.97■■□□□ 1.27
RARA-205ENST00000420042 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
RARA-205ENST00000420042 ILDR2Q71H61 639 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms