RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
CTSA-205ENST00000419493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.033e-7■□□□□ 10.7
CTSA-205ENST00000419493 ANKRD30AQ9BXX3 1397 aa14.84□□□□□ -0.03
CTSA-205ENST00000419493 DUOX2Q9NRD8 1548 aa14.83□□□□□ -0.04
CTSA-205ENST00000419493 FBXO31Q5XUX0 539 aaPredicted RBP14.83□□□□□ -0.04
CTSA-205ENST00000419493 DNMT1P26358 1616 aaKnown RBP14.83□□□□□ -0.04
CTSA-205ENST00000419493 SHANK2Q9UPX8 1470 aa14.82□□□□□ -0.04
CTSA-205ENST00000419493 ITGAEP38570 1179 aa14.82□□□□□ -0.04
CTSA-205ENST00000419493 DMRT2Q9Y5R5 561 aa14.82□□□□□ -0.04
CTSA-205ENST00000419493 PTPRKQ15262 1439 aa14.82□□□□□ -0.04
CTSA-205ENST00000419493 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
CTSA-205ENST00000419493 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
CTSA-205ENST00000419493 EIF2AK4Q9P2K8 1649 aaKnown RBP14.78□□□□□ -0.04
CTSA-205ENST00000419493 ERBINQ96RT1 1412 aa14.78□□□□□ -0.04
CTSA-205ENST00000419493 FAM135AQ9P2D6 1515 aa14.77□□□□□ -0.04
CTSA-205ENST00000419493 NCOA1Q15788 1441 aa14.77□□□□□ -0.04
CTSA-205ENST00000419493 KANK1Q14678 1352 aa14.77□□□□□ -0.04
CTSA-205ENST00000419493 TNRQ92752 1358 aa14.77□□□□□ -0.04
CTSA-205ENST00000419493 PZPP20742 1482 aa14.76□□□□□ -0.05
CTSA-205ENST00000419493 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
CTSA-205ENST00000419493 RNF17Q9BXT8 1623 aaKnown RBP14.76□□□□□ -0.05
CTSA-205ENST00000419493 CAMSAP1Q5T5Y3 1602 aa14.74□□□□□ -0.05
CTSA-205ENST00000419493 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
CTSA-205ENST00000419493 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
CTSA-205ENST00000419493 ABCC3O15438 1527 aa14.74□□□□□ -0.05
CTSA-205ENST00000419493 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
CTSA-205ENST00000419493 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
CTSA-205ENST00000419493 ZC3H13Q5T200 1668 aaKnown RBP14.72□□□□□ -0.05
CTSA-205ENST00000419493 ADGRL2O95490 1459 aa14.72□□□□□ -0.05
CTSA-205ENST00000419493 PKD2Q13563 968 aa14.72□□□□□ -0.05
CTSA-205ENST00000419493 CEP152O94986 1710 aa14.72□□□□□ -0.05
CTSA-205ENST00000419493 A2ML1A8K2U0 1454 aa14.71□□□□□ -0.05
CTSA-205ENST00000419493 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.05
CTSA-205ENST00000419493 CFAP65Q6ZU64 1925 aaKnown RBP14.71□□□□□ -0.05
CTSA-205ENST00000419493 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
CTSA-205ENST00000419493 ANKRD50Q9ULJ7 1429 aa14.71□□□□□ -0.05
CTSA-205ENST00000419493 PTPRTO14522 1441 aa14.69□□□□□ -0.06
CTSA-205ENST00000419493 ZNF142P52746 1687 aaPredicted RBP14.69□□□□□ -0.06
CTSA-205ENST00000419493 CERKQ8TCT0 537 aa14.69□□□□□ -0.06
CTSA-205ENST00000419493 PRDM15P57071 1507 aaPredicted RBP14.69□□□□□ -0.06
CTSA-205ENST00000419493 FBXO41Q8TF61 875 aa14.68□□□□□ -0.06
CTSA-205ENST00000419493 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
CTSA-205ENST00000419493 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
CTSA-205ENST00000419493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.06
CTSA-205ENST00000419493 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
CTSA-205ENST00000419493 NLRP1Q9C000 1473 aa14.67□□□□□ -0.06
CTSA-205ENST00000419493 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
CTSA-205ENST00000419493 PLA2R1Q13018 1463 aa14.66□□□□□ -0.06
CTSA-205ENST00000419493 ROCK1Q13464 1354 aa14.66□□□□□ -0.06
CTSA-205ENST00000419493 SPATA31D1Q6ZQQ2 1576 aa14.65□□□□□ -0.06
CTSA-205ENST00000419493 DEPDC5O75140 1603 aa14.65□□□□□ -0.06
CTSA-205ENST00000419493 ARHGAP31Q2M1Z3 1444 aa14.65□□□□□ -0.06
CTSA-205ENST00000419493 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
CTSA-205ENST00000419493 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
CTSA-205ENST00000419493 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
CTSA-205ENST00000419493 IDI1Q13907 227 aa14.6□□□□□ -0.07
CTSA-205ENST00000419493 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
CTSA-205ENST00000419493 NUP155O75694 1391 aa14.6□□□□□ -0.07
CTSA-205ENST00000419493 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
CTSA-205ENST00000419493 EID1Q9Y6B2 187 aa14.59□□□□□ -0.07
CTSA-205ENST00000419493 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
CTSA-205ENST00000419493 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
CTSA-205ENST00000419493 POLR1AO95602 1720 aaPredicted RBP14.56□□□□□ -0.08
CTSA-205ENST00000419493 CHGAP10645 457 aaKnown RBP14.56□□□□□ -0.08
CTSA-205ENST00000419493 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
CTSA-205ENST00000419493 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
CTSA-205ENST00000419493 RPRD2Q5VT52 1461 aaKnown RBP14.55□□□□□ -0.08
CTSA-205ENST00000419493 UNC13BO14795 1591 aa14.55□□□□□ -0.08
CTSA-205ENST00000419493 UBR1Q8IWV7 1749 aa14.55□□□□□ -0.08
CTSA-205ENST00000419493 LTKP29376 864 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 BCANQ96GW7 911 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 NOS1P29475 1434 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 PIK3C2BO00750 1634 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 LTBP4Q8N2S1 1624 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 TET3O43151 1660 aa14.54□□□□□ -0.08
CTSA-205ENST00000419493 NEURL4Q96JN8 1562 aa14.53□□□□□ -0.08
CTSA-205ENST00000419493 SYNMO15061 1565 aa14.51□□□□□ -0.09
CTSA-205ENST00000419493 MED14O60244 1454 aa14.51□□□□□ -0.09
CTSA-205ENST00000419493 SCAF11Q99590 1463 aaKnown RBP14.51□□□□□ -0.09
CTSA-205ENST00000419493 TMEM2Q9UHN6 1383 aa14.51□□□□□ -0.09
CTSA-205ENST00000419493 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
CTSA-205ENST00000419493 GCC2Q8IWJ2 1684 aa14.51□□□□□ -0.09
CTSA-205ENST00000419493 NAIPQ13075 1403 aa14.5□□□□□ -0.09
CTSA-205ENST00000419493 HDGFP51858 240 aaKnown RBP14.5□□□□□ -0.09
CTSA-205ENST00000419493 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
CTSA-205ENST00000419493 PPP1R15AO75807 674 aaPredicted RBP14.49□□□□□ -0.09
CTSA-205ENST00000419493 SLIT1O75093 1534 aa14.49□□□□□ -0.09
CTSA-205ENST00000419493 E9PCH4 1651 aa14.49□□□□□ -0.09
CTSA-205ENST00000419493 IQGAP1P46940 1657 aa14.49□□□□□ -0.09
CTSA-205ENST00000419493 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
CTSA-205ENST00000419493 ARHGAP23Q9P227 1491 aa14.48□□□□□ -0.09
CTSA-205ENST00000419493 HFM1A2PYH4 1435 aa14.47□□□□□ -0.09
CTSA-205ENST00000419493 NUTM2DQ5VT03 806 aaPredicted RBP14.46□□□□□ -0.09
CTSA-205ENST00000419493 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
CTSA-205ENST00000419493 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
CTSA-205ENST00000419493 IQSEC2Q5JU85 1478 aa14.45□□□□□ -0.1
CTSA-205ENST00000419493 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
CTSA-205ENST00000419493 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
CTSA-205ENST00000419493 KDM5AP29375 1690 aaKnown RBP14.45□□□□□ -0.1
CTSA-205ENST00000419493 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms