RNA–Protein interactions for RNA: ENST00000419450.1

LINC01788-201, Transcript of long intergenic non-protein coding RNA 1788, humanhuman

TSL 1 (best) BASIC

Gene LINC01788, Length 2,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01788-201ENST00000419450 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
LINC01788-201ENST00000419450 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
LINC01788-201ENST00000419450 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
LINC01788-201ENST00000419450 CCDC18Q5T9S5 1454 aa9.97□□□□□ -0.81
LINC01788-201ENST00000419450 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
LINC01788-201ENST00000419450 PHLDB1Q86UU1 1377 aa9.96□□□□□ -0.82
LINC01788-201ENST00000419450 RGS3P49796 1198 aa9.95□□□□□ -0.82
LINC01788-201ENST00000419450 PTPN23Q9H3S7 1636 aa9.95□□□□□ -0.82
LINC01788-201ENST00000419450 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
LINC01788-201ENST00000419450 EXOC6Q8TAG9 804 aa9.94□□□□□ -0.82
LINC01788-201ENST00000419450 PLCD4Q9BRC7 762 aa9.94□□□□□ -0.82
LINC01788-201ENST00000419450 FAM50AQ14320 339 aaKnown RBP9.93□□□□□ -0.82
LINC01788-201ENST00000419450 FAM43BQ6ZT52 329 aaPredicted RBP9.93□□□□□ -0.82
LINC01788-201ENST00000419450 HFM1A2PYH4 1435 aa9.93□□□□□ -0.82
LINC01788-201ENST00000419450 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
LINC01788-201ENST00000419450 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
LINC01788-201ENST00000419450 ZNF830Q96NB3 372 aaPredicted RBP9.92□□□□□ -0.82
LINC01788-201ENST00000419450 MAP7D2Q96T17 732 aa9.92□□□□□ -0.82
LINC01788-201ENST00000419450 POGKQ9P215 609 aa9.92□□□□□ -0.82
LINC01788-201ENST00000419450 GOLGA6L3A6NEY3 463 aa9.91□□□□□ -0.82
LINC01788-201ENST00000419450 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
LINC01788-201ENST00000419450 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
LINC01788-201ENST00000419450 KTN1Q86UP2 1357 aaKnown RBP9.91□□□□□ -0.82
LINC01788-201ENST00000419450 SPOCK2Q92563 424 aa9.91□□□□□ -0.82
LINC01788-201ENST00000419450 PSMD1Q99460 953 aa9.91□□□□□ -0.82
LINC01788-201ENST00000419450 FSD2A1L4K1 749 aa9.9□□□□□ -0.82
LINC01788-201ENST00000419450 RCAN3Q9UKA8 241 aa9.9□□□□□ -0.82
LINC01788-201ENST00000419450 FAM193AP78312 1265 aa9.89□□□□□ -0.83
LINC01788-201ENST00000419450 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
LINC01788-201ENST00000419450 RGL2O15211 777 aa9.89□□□□□ -0.83
LINC01788-201ENST00000419450 PTMAP06454 111 aaKnown RBP9.89□□□□□ -0.83
LINC01788-201ENST00000419450 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
LINC01788-201ENST00000419450 ARID3AQ99856 593 aa9.89□□□□□ -0.83
LINC01788-201ENST00000419450 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
LINC01788-201ENST00000419450 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC01788-201ENST00000419450 ESPNB1AK53 854 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
LINC01788-201ENST00000419450 TERF1P54274 439 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 BECN1Q14457 450 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 SMAP1Q8IYB5 467 aaPredicted RBP9.87□□□□□ -0.83
LINC01788-201ENST00000419450 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
LINC01788-201ENST00000419450 MCCP23508 829 aa9.86□□□□□ -0.83
LINC01788-201ENST00000419450 MRE11P49959 708 aa9.86□□□□□ -0.83
LINC01788-201ENST00000419450 GCC2Q8IWJ2 1684 aa9.86□□□□□ -0.83
LINC01788-201ENST00000419450 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
LINC01788-201ENST00000419450 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
LINC01788-201ENST00000419450 C8orf34Q49A92 452 aa9.86□□□□□ -0.83
LINC01788-201ENST00000419450 MIA2Q96PC5 1412 aa9.85□□□□□ -0.83
LINC01788-201ENST00000419450 KIF7Q2M1P5 1343 aa9.85□□□□□ -0.83
LINC01788-201ENST00000419450 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
LINC01788-201ENST00000419450 CENPQQ7L2Z9 268 aaPredicted RBP9.85□□□□□ -0.83
LINC01788-201ENST00000419450 MTERF4Q7Z6M4 381 aaKnown RBP9.85□□□□□ -0.83
LINC01788-201ENST00000419450 PNISRQ8TF01 805 aaKnown RBP9.85□□□□□ -0.83
LINC01788-201ENST00000419450 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
LINC01788-201ENST00000419450 SPATA31E1Q6ZUB1 1445 aa9.85□□□□□ -0.83
LINC01788-201ENST00000419450 KIF27Q86VH2 1401 aa9.85□□□□□ -0.83
LINC01788-201ENST00000419450 KDM2BQ8NHM5 1336 aa9.84□□□□□ -0.83
LINC01788-201ENST00000419450 PCF11O94913 1555 aaKnown RBP9.84□□□□□ -0.83
LINC01788-201ENST00000419450 CLGNO14967 610 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 PTMSP20962 102 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 MYH16Q9H6N6 1097 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 TMEM51Q9NW97 253 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 NAIPQ13075 1403 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 FGD6Q6ZV73 1430 aa9.83□□□□□ -0.84
LINC01788-201ENST00000419450 TRIM44Q96DX7 344 aaPredicted RBP9.83□□□□□ -0.84
LINC01788-201ENST00000419450 CUX1P39880 1505 aa9.82□□□□□ -0.84
LINC01788-201ENST00000419450 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
LINC01788-201ENST00000419450 FYCO1Q9BQS8 1478 aa9.82□□□□□ -0.84
LINC01788-201ENST00000419450 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
LINC01788-201ENST00000419450 ZMYM4Q5VZL5 1548 aa9.81□□□□□ -0.84
LINC01788-201ENST00000419450 MMP14P50281 582 aa9.81□□□□□ -0.84
LINC01788-201ENST00000419450 UTP14CQ5TAP6 766 aaKnown RBP9.81□□□□□ -0.84
LINC01788-201ENST00000419450 ZNF692Q9BU19 519 aaPredicted RBP9.81□□□□□ -0.84
LINC01788-201ENST00000419450 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
LINC01788-201ENST00000419450 KIAA1211Q6ZU35 1233 aa9.8□□□□□ -0.84
LINC01788-201ENST00000419450 ZNF526Q8TF50 670 aaPredicted RBP9.8□□□□□ -0.84
LINC01788-201ENST00000419450 PANK2Q9BZ23 570 aa9.8□□□□□ -0.84
LINC01788-201ENST00000419450 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
LINC01788-201ENST00000419450 PLEKHH2Q8IVE3 1493 aa9.8□□□□□ -0.84
LINC01788-201ENST00000419450 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
LINC01788-201ENST00000419450 INSRP06213 1382 aa9.79□□□□□ -0.84
LINC01788-201ENST00000419450 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
LINC01788-201ENST00000419450 CTTNBP2Q8WZ74 1663 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01788-201ENST00000419450 IRX3P78415 501 aaPredicted RBP9.78□□□□□ -0.84
LINC01788-201ENST00000419450 POLA2Q14181 598 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 ZNF622Q969S3 477 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01788-201ENST00000419450 GRPEL1Q9HAV7 217 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 CRBNQ96SW2 442 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 ANTXR1Q9H6X2 564 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
LINC01788-201ENST00000419450 ERBB4Q15303 1308 aa9.77□□□□□ -0.84
LINC01788-201ENST00000419450 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
LINC01788-201ENST00000419450 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
LINC01788-201ENST00000419450 KIF15Q9NS87 1388 aa9.77□□□□□ -0.85
LINC01788-201ENST00000419450 OFD1O75665 1012 aa9.76□□□□□ -0.85
LINC01788-201ENST00000419450 SETQ01105 290 aaPredicted RBP9.76□□□□□ -0.85
LINC01788-201ENST00000419450 TEX14Q8IWB6 1497 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms