RNA–Protein interactions for RNA: ENST00000419241.1

ITSN1-214, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-214ENST00000419241 SETBP1Q9Y6X0 1596 aa12.23□□□□□ -0.45
ITSN1-214ENST00000419241 TNRQ92752 1358 aa12.23□□□□□ -0.45
ITSN1-214ENST00000419241 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
ITSN1-214ENST00000419241 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
ITSN1-214ENST00000419241 JCADQ9P266 1359 aa12.22□□□□□ -0.45
ITSN1-214ENST00000419241 GGT6Q6P531 493 aa12.22□□□□□ -0.45
ITSN1-214ENST00000419241 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
ITSN1-214ENST00000419241 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
ITSN1-214ENST00000419241 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
ITSN1-214ENST00000419241 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
ITSN1-214ENST00000419241 IQGAP1P46940 1657 aa12.21□□□□□ -0.45
ITSN1-214ENST00000419241 FOXD1Q16676 465 aa12.2□□□□□ -0.46
ITSN1-214ENST00000419241 MEX3CQ5U5Q3 659 aaKnown RBP12.2□□□□□ -0.46
ITSN1-214ENST00000419241 LRP6O75581 1613 aa12.19□□□□□ -0.46
ITSN1-214ENST00000419241 KIF14Q15058 1648 aa12.19□□□□□ -0.46
ITSN1-214ENST00000419241 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-214ENST00000419241 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
ITSN1-214ENST00000419241 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
ITSN1-214ENST00000419241 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
ITSN1-214ENST00000419241 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
ITSN1-214ENST00000419241 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
ITSN1-214ENST00000419241 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
ITSN1-214ENST00000419241 PLXNC1O60486 1568 aa12.15□□□□□ -0.46
ITSN1-214ENST00000419241 A2MP01023 1474 aa12.14□□□□□ -0.47
ITSN1-214ENST00000419241 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
ITSN1-214ENST00000419241 SPATA31A6Q5VVP1 1343 aa12.14□□□□□ -0.47
ITSN1-214ENST00000419241 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
ITSN1-214ENST00000419241 RGS12O14924 1447 aa12.14□□□□□ -0.47
ITSN1-214ENST00000419241 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
ITSN1-214ENST00000419241 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
ITSN1-214ENST00000419241 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
ITSN1-214ENST00000419241 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
ITSN1-214ENST00000419241 NUTM2BA6NNL0 878 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 NUTM2EB1AL46 878 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 KANK4Q5T7N3 995 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 NUTM2AQ8IVF1 878 aaPredicted RBP12.13□□□□□ -0.47
ITSN1-214ENST00000419241 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
ITSN1-214ENST00000419241 NLRP1Q9C000 1473 aa12.13□□□□□ -0.47
ITSN1-214ENST00000419241 XIRP1Q702N8 1843 aaKnown RBP12.12□□□□□ -0.47
ITSN1-214ENST00000419241 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
ITSN1-214ENST00000419241 PZPP20742 1482 aa12.11□□□□□ -0.47
ITSN1-214ENST00000419241 TMEM94Q12767 1356 aa12.11□□□□□ -0.47
ITSN1-214ENST00000419241 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
ITSN1-214ENST00000419241 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
ITSN1-214ENST00000419241 ATP7AQ04656 1500 aa12.1□□□□□ -0.47
ITSN1-214ENST00000419241 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
ITSN1-214ENST00000419241 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
ITSN1-214ENST00000419241 MTUS2Q5JR59 1369 aa12.08□□□□□ -0.48
ITSN1-214ENST00000419241 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
ITSN1-214ENST00000419241 AFF2P51816 1311 aa12.08□□□□□ -0.48
ITSN1-214ENST00000419241 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
ITSN1-214ENST00000419241 COL16A1Q07092 1604 aaPredicted RBP12.07□□□□□ -0.48
ITSN1-214ENST00000419241 NCOA2Q15596 1464 aa12.06□□□□□ -0.48
ITSN1-214ENST00000419241 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
ITSN1-214ENST00000419241 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
ITSN1-214ENST00000419241 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
ITSN1-214ENST00000419241 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
ITSN1-214ENST00000419241 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
ITSN1-214ENST00000419241 APLP2Q06481 763 aa12.04□□□□□ -0.48
ITSN1-214ENST00000419241 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
ITSN1-214ENST00000419241 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
ITSN1-214ENST00000419241 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
ITSN1-214ENST00000419241 LRP5O75197 1615 aa12.03□□□□□ -0.48
ITSN1-214ENST00000419241 LTKP29376 864 aa12.02□□□□□ -0.49
ITSN1-214ENST00000419241 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.49
ITSN1-214ENST00000419241 YY1P25490 414 aa12.01□□□□□ -0.49
ITSN1-214ENST00000419241 MSH6P52701 1360 aa12.01□□□□□ -0.49
ITSN1-214ENST00000419241 TXNDC2Q86VQ3 553 aa12□□□□□ -0.49
ITSN1-214ENST00000419241 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
ITSN1-214ENST00000419241 KCNA6P17658 529 aa11.99□□□□□ -0.49
ITSN1-214ENST00000419241 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
ITSN1-214ENST00000419241 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
ITSN1-214ENST00000419241 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
ITSN1-214ENST00000419241 PRDM15P57071 1507 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-214ENST00000419241 KIF3BO15066 747 aa11.97□□□□□ -0.49
ITSN1-214ENST00000419241 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
ITSN1-214ENST00000419241 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
ITSN1-214ENST00000419241 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
ITSN1-214ENST00000419241 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.49
ITSN1-214ENST00000419241 C8orf37Q96NL8 207 aa11.96□□□□□ -0.49
ITSN1-214ENST00000419241 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
ITSN1-214ENST00000419241 EP400Q96L91 3159 aa11.95□□□□□ -0.5
ITSN1-214ENST00000419241 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
ITSN1-214ENST00000419241 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
ITSN1-214ENST00000419241 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
ITSN1-214ENST00000419241 AHDC1Q5TGY3 1603 aaPredicted RBP11.94□□□□□ -0.5
ITSN1-214ENST00000419241 EID1Q9Y6B2 187 aa11.94□□□□□ -0.5
ITSN1-214ENST00000419241 SLIT1O75093 1534 aa11.94□□□□□ -0.5
ITSN1-214ENST00000419241 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
ITSN1-214ENST00000419241 ABCC3O15438 1527 aa11.93□□□□□ -0.5
ITSN1-214ENST00000419241 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
ITSN1-214ENST00000419241 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
ITSN1-214ENST00000419241 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
ITSN1-214ENST00000419241 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
ITSN1-214ENST00000419241 ZNF644Q9H582 1327 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-214ENST00000419241 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
ITSN1-214ENST00000419241 DIP2AQ14689 1571 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms