RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
CHMP5-202ENST00000419016 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
CHMP5-202ENST00000419016 YEATS2Q9ULM3 1422 aa20.2■□□□□ 0.82
CHMP5-202ENST00000419016 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
CHMP5-202ENST00000419016 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
CHMP5-202ENST00000419016 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
CHMP5-202ENST00000419016 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
CHMP5-202ENST00000419016 ANKRD30BQ9BXX2 1392 aa20.16■□□□□ 0.82
CHMP5-202ENST00000419016 BCORL1Q5H9F3 1711 aa20.16■□□□□ 0.82
CHMP5-202ENST00000419016 SIN3AQ96ST3 1273 aa20.15■□□□□ 0.82
CHMP5-202ENST00000419016 KIF3BO15066 747 aa20.15■□□□□ 0.82
CHMP5-202ENST00000419016 FOXD1Q16676 465 aa20.15■□□□□ 0.82
CHMP5-202ENST00000419016 VWDEQ8N2E2 1590 aa20.15■□□□□ 0.82
CHMP5-202ENST00000419016 MROH1Q8NDA8 1641 aa20.14■□□□□ 0.82
CHMP5-202ENST00000419016 PKD2Q13563 968 aa20.14■□□□□ 0.81
CHMP5-202ENST00000419016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■■□□□ 11.5
CHMP5-202ENST00000419016 PRDM15P57071 1507 aaPredicted RBP20.13■□□□□ 0.81
CHMP5-202ENST00000419016 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
CHMP5-202ENST00000419016 ATP10AO60312 1499 aa20.12■□□□□ 0.81
CHMP5-202ENST00000419016 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
CHMP5-202ENST00000419016 TIMELESSQ9UNS1 1208 aa20.08■□□□□ 0.81
CHMP5-202ENST00000419016 ARHGEF40Q8TER5 1519 aa20.08■□□□□ 0.8
CHMP5-202ENST00000419016 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
CHMP5-202ENST00000419016 KANK1Q14678 1352 aa20.06■□□□□ 0.8
CHMP5-202ENST00000419016 AGLP35573 1532 aa20.06■□□□□ 0.8
CHMP5-202ENST00000419016 LMTK2Q8IWU2 1503 aa20.05■□□□□ 0.8
CHMP5-202ENST00000419016 RPRD2Q5VT52 1461 aaKnown RBP20.04■□□□□ 0.8
CHMP5-202ENST00000419016 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
CHMP5-202ENST00000419016 TET3O43151 1660 aa20.02■□□□□ 0.8
CHMP5-202ENST00000419016 GGT6Q6P531 493 aa20.01■□□□□ 0.79
CHMP5-202ENST00000419016 SIGLEC1Q9BZZ2 1709 aa20■□□□□ 0.79
CHMP5-202ENST00000419016 E9PCH4 1651 aa20■□□□□ 0.79
CHMP5-202ENST00000419016 ABCC3O15438 1527 aa19.98■□□□□ 0.79
CHMP5-202ENST00000419016 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
CHMP5-202ENST00000419016 PTPRTO14522 1441 aa19.97■□□□□ 0.79
CHMP5-202ENST00000419016 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
CHMP5-202ENST00000419016 CEP152O94986 1710 aa19.95■□□□□ 0.78
CHMP5-202ENST00000419016 PPP1R15AO75807 674 aaPredicted RBP19.94■□□□□ 0.78
CHMP5-202ENST00000419016 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
CHMP5-202ENST00000419016 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
CHMP5-202ENST00000419016 ZC3H13Q5T200 1668 aaKnown RBP19.92■□□□□ 0.78
CHMP5-202ENST00000419016 NPATQ14207 1427 aa19.92■□□□□ 0.78
CHMP5-202ENST00000419016 TRPM2O94759 1503 aa19.91■□□□□ 0.78
CHMP5-202ENST00000419016 ARHGAP31Q2M1Z3 1444 aa19.91■□□□□ 0.78
CHMP5-202ENST00000419016 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
CHMP5-202ENST00000419016 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
CHMP5-202ENST00000419016 CAMSAP1Q5T5Y3 1602 aa19.89■□□□□ 0.77
CHMP5-202ENST00000419016 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
CHMP5-202ENST00000419016 NOS1P29475 1434 aa19.84■□□□□ 0.77
CHMP5-202ENST00000419016 CLTCL1P53675 1640 aa19.83■□□□□ 0.76
CHMP5-202ENST00000419016 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
CHMP5-202ENST00000419016 CNTLNQ9NXG0 1405 aa19.82■□□□□ 0.76
CHMP5-202ENST00000419016 MLECQ14165 292 aa19.81■□□□□ 0.76
CHMP5-202ENST00000419016 ARID4BQ4LE39 1312 aaPredicted RBP19.79■□□□□ 0.76
CHMP5-202ENST00000419016 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
CHMP5-202ENST00000419016 CLTCQ00610 1675 aaKnown RBP19.78■□□□□ 0.76
CHMP5-202ENST00000419016 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
CHMP5-202ENST00000419016 SYNMO15061 1565 aa19.77■□□□□ 0.76
CHMP5-202ENST00000419016 NBPF8Q3BBV2 869 aa19.76■□□□□ 0.75
CHMP5-202ENST00000419016 UHRF1BP1Q6BDS2 1440 aa19.76■□□□□ 0.75
CHMP5-202ENST00000419016 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
CHMP5-202ENST00000419016 PREX1Q8TCU6 1659 aa19.74■□□□□ 0.75
CHMP5-202ENST00000419016 CFAP65Q6ZU64 1925 aaKnown RBP19.74■□□□□ 0.75
CHMP5-202ENST00000419016 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
CHMP5-202ENST00000419016 ZMYM3Q14202 1370 aa19.74■□□□□ 0.75
CHMP5-202ENST00000419016 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
CHMP5-202ENST00000419016 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
CHMP5-202ENST00000419016 DCAF11Q8TEB1 546 aa19.72■□□□□ 0.75
CHMP5-202ENST00000419016 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
CHMP5-202ENST00000419016 SLC52A1Q9NWF4 448 aa19.71■□□□□ 0.75
CHMP5-202ENST00000419016 ADGRB3O60242 1522 aa19.7■□□□□ 0.74
CHMP5-202ENST00000419016 MROH2AA6NES4 1674 aa19.7■□□□□ 0.74
CHMP5-202ENST00000419016 ESF1Q9H501 851 aaKnown RBP19.7■□□□□ 0.74
CHMP5-202ENST00000419016 IDI1Q13907 227 aa19.69■□□□□ 0.74
CHMP5-202ENST00000419016 KIF1BO60333 1816 aa19.68■□□□□ 0.74
CHMP5-202ENST00000419016 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
CHMP5-202ENST00000419016 STAC3Q96MF2 364 aa19.68■□□□□ 0.74
CHMP5-202ENST00000419016 PRAG1Q86YV5 1406 aa19.67■□□□□ 0.74
CHMP5-202ENST00000419016 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CHMP5-202ENST00000419016 RALGAPBQ86X10 1494 aa19.63■□□□□ 0.73
CHMP5-202ENST00000419016 FER1L4A9Z1Z3 1794 aa19.62■□□□□ 0.73
CHMP5-202ENST00000419016 TMEM131LA2VDJ0 1609 aa19.61■□□□□ 0.73
CHMP5-202ENST00000419016 IFT172Q9UG01 1749 aa19.61■□□□□ 0.73
CHMP5-202ENST00000419016 MYOM2P54296 1465 aa19.61■□□□□ 0.73
CHMP5-202ENST00000419016 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
CHMP5-202ENST00000419016 RPGRIP1LQ68CZ1 1315 aa19.61■□□□□ 0.73
CHMP5-202ENST00000419016 ADAMTSL3P82987 1691 aa19.6■□□□□ 0.73
CHMP5-202ENST00000419016 C3P01024 1663 aa19.59■□□□□ 0.73
CHMP5-202ENST00000419016 MADDQ8WXG6 1647 aa19.59■□□□□ 0.73
CHMP5-202ENST00000419016 NRXN1Q9ULB1 1477 aa19.59■□□□□ 0.73
CHMP5-202ENST00000419016 CHGAP10645 457 aaKnown RBP19.59■□□□□ 0.73
CHMP5-202ENST00000419016 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.73
CHMP5-202ENST00000419016 TNRQ92752 1358 aa19.58■□□□□ 0.73
CHMP5-202ENST00000419016 CEBPAP49715 358 aaPredicted RBP19.57■□□□□ 0.72
CHMP5-202ENST00000419016 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
CHMP5-202ENST00000419016 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
CHMP5-202ENST00000419016 PPLO60437 1756 aa19.56■□□□□ 0.72
CHMP5-202ENST00000419016 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
CHMP5-202ENST00000419016 A2ML1A8K2U0 1454 aa19.54■□□□□ 0.72
CHMP5-202ENST00000419016 ZFYVE9O95405 1425 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms