RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WASHC2CQ9Y4E1 1318 aa25.54■■□□□ 1.68
LINC00404-201ENST00000418660 CROCC2H7BZ55 1655 aa25.54■■□□□ 1.68
LINC00404-201ENST00000418660 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
LINC00404-201ENST00000418660 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
LINC00404-201ENST00000418660 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
LINC00404-201ENST00000418660 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
LINC00404-201ENST00000418660 RRP7BPQ9NSQ0 103 aa25.49■■□□□ 1.67
LINC00404-201ENST00000418660 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
LINC00404-201ENST00000418660 STRCQ7RTU9 1775 aa25.47■■□□□ 1.67
LINC00404-201ENST00000418660 ILDR1Q86SU0 546 aaPredicted RBP25.47■■□□□ 1.67
LINC00404-201ENST00000418660 PZPP20742 1482 aa25.47■■□□□ 1.67
LINC00404-201ENST00000418660 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
LINC00404-201ENST00000418660 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
LINC00404-201ENST00000418660 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
LINC00404-201ENST00000418660 ANKRD30AQ9BXX3 1397 aa25.44■■□□□ 1.66
LINC00404-201ENST00000418660 FBXO31Q5XUX0 539 aaPredicted RBP25.44■■□□□ 1.66
LINC00404-201ENST00000418660 CHIC2Q9UKJ5 165 aa25.44■■□□□ 1.66
LINC00404-201ENST00000418660 ABCC3O15438 1527 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 ZNF142P52746 1687 aaPredicted RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 MROH1Q8NDA8 1641 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 NCOA1Q15788 1441 aa25.42■■□□□ 1.66
LINC00404-201ENST00000418660 CEP170BQ9Y4F5 1589 aaPredicted RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
LINC00404-201ENST00000418660 TNRQ92752 1358 aa25.41■■□□□ 1.66
LINC00404-201ENST00000418660 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
LINC00404-201ENST00000418660 PTPRTO14522 1441 aa25.4■■□□□ 1.66
LINC00404-201ENST00000418660 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
LINC00404-201ENST00000418660 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
LINC00404-201ENST00000418660 PRDM15P57071 1507 aaPredicted RBP25.36■■□□□ 1.65
LINC00404-201ENST00000418660 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
LINC00404-201ENST00000418660 PLA2R1Q13018 1463 aa25.34■■□□□ 1.65
LINC00404-201ENST00000418660 FBXO41Q8TF61 875 aa25.33■■□□□ 1.65
LINC00404-201ENST00000418660 PKD2Q13563 968 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.32■■□□□ 1.64
LINC00404-201ENST00000418660 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 NCKAP5LQ9HCH0 1330 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 CEP152O94986 1710 aa25.32■■□□□ 1.64
LINC00404-201ENST00000418660 NLRP1Q9C000 1473 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 KANK1Q14678 1352 aa25.31■■□□□ 1.64
LINC00404-201ENST00000418660 CERKQ8TCT0 537 aa25.3■■□□□ 1.64
LINC00404-201ENST00000418660 ERVK-7P63135 1459 aa25.28■■□□□ 1.64
LINC00404-201ENST00000418660 ARHGAP31Q2M1Z3 1444 aa25.28■■□□□ 1.64
LINC00404-201ENST00000418660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
LINC00404-201ENST00000418660 THEMISQ8N1K5 641 aaPredicted RBP25.25■■□□□ 1.63
LINC00404-201ENST00000418660 ANKRD50Q9ULJ7 1429 aa25.25■■□□□ 1.63
LINC00404-201ENST00000418660 VWDEQ8N2E2 1590 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 UGGT1Q9NYU2 1555 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 LMTK2Q8IWU2 1503 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
LINC00404-201ENST00000418660 ITGAEP38570 1179 aa25.18■■□□□ 1.62
LINC00404-201ENST00000418660 ANKLE2Q86XL3 938 aa25.18■■□□□ 1.62
LINC00404-201ENST00000418660 LTBP4Q8N2S1 1624 aa25.17■■□□□ 1.62
LINC00404-201ENST00000418660 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
LINC00404-201ENST00000418660 POLR1AO95602 1720 aaPredicted RBP25.15■■□□□ 1.62
LINC00404-201ENST00000418660 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
LINC00404-201ENST00000418660 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
LINC00404-201ENST00000418660 NEURL4Q96JN8 1562 aa25.13■■□□□ 1.61
LINC00404-201ENST00000418660 ZNF335Q9H4Z2 1342 aaPredicted RBP25.12■■□□□ 1.61
LINC00404-201ENST00000418660 UNC13BO14795 1591 aa25.1■■□□□ 1.61
LINC00404-201ENST00000418660 MED14O60244 1454 aa25.09■■□□□ 1.61
LINC00404-201ENST00000418660 UBR1Q8IWV7 1749 aa25.09■■□□□ 1.61
LINC00404-201ENST00000418660 NOS1P29475 1434 aa25.08■■□□□ 1.61
LINC00404-201ENST00000418660 RPRD2Q5VT52 1461 aaKnown RBP25.07■■□□□ 1.6
LINC00404-201ENST00000418660 NPHP4O75161 1426 aaPredicted RBP25.06■■□□□ 1.6
LINC00404-201ENST00000418660 IQSEC2Q5JU85 1478 aa25.06■■□□□ 1.6
LINC00404-201ENST00000418660 TET3O43151 1660 aa25.05■■□□□ 1.6
LINC00404-201ENST00000418660 IDI1Q13907 227 aa25.05■■□□□ 1.6
LINC00404-201ENST00000418660 PIK3C2BO00750 1634 aa25.04■■□□□ 1.6
LINC00404-201ENST00000418660 SYNMO15061 1565 aa25.04■■□□□ 1.6
LINC00404-201ENST00000418660 ARHGAP23Q9P227 1491 aa25.03■■□□□ 1.6
LINC00404-201ENST00000418660 SLIT1O75093 1534 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 SLC52A1Q9NWF4 448 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 STAG3Q9UJ98 1225 aa25.02■■□□□ 1.6
LINC00404-201ENST00000418660 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
LINC00404-201ENST00000418660 TXNDC2Q86VQ3 553 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 NUP155O75694 1391 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 SCAF11Q99590 1463 aaKnown RBP25■■□□□ 1.59
LINC00404-201ENST00000418660 IQGAP3Q86VI3 1631 aa25■■□□□ 1.59
LINC00404-201ENST00000418660 KDM5AP29375 1690 aaKnown RBP25■■□□□ 1.59
LINC00404-201ENST00000418660 LTKP29376 864 aa24.99■■□□□ 1.59
LINC00404-201ENST00000418660 IQGAP1P46940 1657 aa24.99■■□□□ 1.59
LINC00404-201ENST00000418660 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
LINC00404-201ENST00000418660 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
LINC00404-201ENST00000418660 ADGRB3O60242 1522 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 CPS1P31327 1500 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 E9PCH4 1651 aa24.94■■□□□ 1.58
LINC00404-201ENST00000418660 NAIPQ13075 1403 aa24.93■■□□□ 1.58
LINC00404-201ENST00000418660 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
LINC00404-201ENST00000418660 UBAP1LF5GYI3 381 aa24.86■■□□□ 1.57
LINC00404-201ENST00000418660 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
LINC00404-201ENST00000418660 HDGFP51858 240 aaKnown RBP24.82■■□□□ 1.56
LINC00404-201ENST00000418660 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
LINC00404-201ENST00000418660 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
LINC00404-201ENST00000418660 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
LINC00404-201ENST00000418660 RIMS2Q9UQ26 1411 aa24.79■■□□□ 1.56
LINC00404-201ENST00000418660 LRRC7Q96NW7 1537 aa24.78■■□□□ 1.56
LINC00404-201ENST00000418660 MYO5BQ9ULV0 1848 aa24.78■■□□□ 1.56
LINC00404-201ENST00000418660 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
LINC00404-201ENST00000418660 TOM1O60784 492 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms