RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
TMEM248-203ENST00000418375 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
TMEM248-203ENST00000418375 KIF3BO15066 747 aa20.4■□□□□ 0.86
TMEM248-203ENST00000418375 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
TMEM248-203ENST00000418375 CLTCQ00610 1675 aaKnown RBP20.4■□□□□ 0.86
TMEM248-203ENST00000418375 STRCQ7RTU9 1775 aa20.4■□□□□ 0.86
TMEM248-203ENST00000418375 PTPRKQ15262 1439 aa20.38■□□□□ 0.85
TMEM248-203ENST00000418375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.38■□□□□ 0.85
TMEM248-203ENST00000418375 PTPRTO14522 1441 aa20.37■□□□□ 0.85
TMEM248-203ENST00000418375 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
TMEM248-203ENST00000418375 CROCC2H7BZ55 1655 aa20.35■□□□□ 0.85
TMEM248-203ENST00000418375 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
TMEM248-203ENST00000418375 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
TMEM248-203ENST00000418375 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
TMEM248-203ENST00000418375 KIF15Q9NS87 1388 aa20.33■□□□□ 0.84
TMEM248-203ENST00000418375 CAMSAP1Q5T5Y3 1602 aa20.32■□□□□ 0.84
TMEM248-203ENST00000418375 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
TMEM248-203ENST00000418375 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
TMEM248-203ENST00000418375 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
TMEM248-203ENST00000418375 KDM5DQ9BY66 1539 aa20.29■□□□□ 0.84
TMEM248-203ENST00000418375 DUOX2Q9NRD8 1548 aa20.29■□□□□ 0.84
TMEM248-203ENST00000418375 FAM135AQ9P2D6 1515 aa20.29■□□□□ 0.84
TMEM248-203ENST00000418375 ITGAEP38570 1179 aa20.29■□□□□ 0.84
TMEM248-203ENST00000418375 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
TMEM248-203ENST00000418375 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
TMEM248-203ENST00000418375 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
TMEM248-203ENST00000418375 PKD2Q13563 968 aa20.27■□□□□ 0.84
TMEM248-203ENST00000418375 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
TMEM248-203ENST00000418375 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
TMEM248-203ENST00000418375 PZPP20742 1482 aa20.26■□□□□ 0.83
TMEM248-203ENST00000418375 PLA2R1Q13018 1463 aa20.26■□□□□ 0.83
TMEM248-203ENST00000418375 TNRQ92752 1358 aa20.25■□□□□ 0.83
TMEM248-203ENST00000418375 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
TMEM248-203ENST00000418375 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
TMEM248-203ENST00000418375 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
TMEM248-203ENST00000418375 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
TMEM248-203ENST00000418375 LTBP4Q8N2S1 1624 aa20.2■□□□□ 0.82
TMEM248-203ENST00000418375 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
TMEM248-203ENST00000418375 ANKRD50Q9ULJ7 1429 aa20.18■□□□□ 0.82
TMEM248-203ENST00000418375 ZNF335Q9H4Z2 1342 aaPredicted RBP20.17■□□□□ 0.82
TMEM248-203ENST00000418375 ABCC3O15438 1527 aa20.17■□□□□ 0.82
TMEM248-203ENST00000418375 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
TMEM248-203ENST00000418375 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.81
TMEM248-203ENST00000418375 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.81
TMEM248-203ENST00000418375 KANK1Q14678 1352 aa20.13■□□□□ 0.81
TMEM248-203ENST00000418375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.81
TMEM248-203ENST00000418375 ZC3H13Q5T200 1668 aaKnown RBP20.13■□□□□ 0.81
TMEM248-203ENST00000418375 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
TMEM248-203ENST00000418375 ANKLE2Q86XL3 938 aa20.11■□□□□ 0.81
TMEM248-203ENST00000418375 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
TMEM248-203ENST00000418375 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
TMEM248-203ENST00000418375 ERVK-7P63135 1459 aa20.1■□□□□ 0.81
TMEM248-203ENST00000418375 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
TMEM248-203ENST00000418375 DEPDC5O75140 1603 aa20.07■□□□□ 0.8
TMEM248-203ENST00000418375 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
TMEM248-203ENST00000418375 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
TMEM248-203ENST00000418375 NAIPQ13075 1403 aa20.05■□□□□ 0.8
TMEM248-203ENST00000418375 ARHGAP31Q2M1Z3 1444 aa20.04■□□□□ 0.8
TMEM248-203ENST00000418375 CEP152O94986 1710 aa20.04■□□□□ 0.8
TMEM248-203ENST00000418375 POLR1AO95602 1720 aaPredicted RBP20.03■□□□□ 0.8
TMEM248-203ENST00000418375 UBAP1LF5GYI3 381 aa20.03■□□□□ 0.8
TMEM248-203ENST00000418375 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
TMEM248-203ENST00000418375 VWDEQ8N2E2 1590 aa20.01■□□□□ 0.79
TMEM248-203ENST00000418375 MED14O60244 1454 aa20.01■□□□□ 0.79
TMEM248-203ENST00000418375 LMTK2Q8IWU2 1503 aa20.01■□□□□ 0.79
TMEM248-203ENST00000418375 UNC13BO14795 1591 aa20■□□□□ 0.79
TMEM248-203ENST00000418375 NUP155O75694 1391 aa19.99■□□□□ 0.79
TMEM248-203ENST00000418375 GCC2Q8IWJ2 1684 aa19.98■□□□□ 0.79
TMEM248-203ENST00000418375 CPS1P31327 1500 aa19.97■□□□□ 0.79
TMEM248-203ENST00000418375 EFCAB6Q5THR3 1501 aa19.93■□□□□ 0.78
TMEM248-203ENST00000418375 TXNDC2Q86VQ3 553 aa19.93■□□□□ 0.78
TMEM248-203ENST00000418375 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
TMEM248-203ENST00000418375 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
TMEM248-203ENST00000418375 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
TMEM248-203ENST00000418375 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
TMEM248-203ENST00000418375 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
TMEM248-203ENST00000418375 IQGAP1P46940 1657 aa19.92■□□□□ 0.78
TMEM248-203ENST00000418375 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 LTKP29376 864 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
TMEM248-203ENST00000418375 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 RPRD2Q5VT52 1461 aaKnown RBP19.91■□□□□ 0.78
TMEM248-203ENST00000418375 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 SLIT1O75093 1534 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 TET3O43151 1660 aa19.91■□□□□ 0.78
TMEM248-203ENST00000418375 TOM1O60784 492 aa19.9■□□□□ 0.78
TMEM248-203ENST00000418375 IDI1Q13907 227 aa19.9■□□□□ 0.78
TMEM248-203ENST00000418375 TMEM2Q9UHN6 1383 aa19.88■□□□□ 0.77
TMEM248-203ENST00000418375 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
TMEM248-203ENST00000418375 NOS1P29475 1434 aa19.87■□□□□ 0.77
TMEM248-203ENST00000418375 PIP4K2BP78356 416 aa19.87■□□□□ 0.77
TMEM248-203ENST00000418375 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
TMEM248-203ENST00000418375 SLC52A1Q9NWF4 448 aa19.85■□□□□ 0.77
TMEM248-203ENST00000418375 SYNMO15061 1565 aa19.84■□□□□ 0.77
TMEM248-203ENST00000418375 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
TMEM248-203ENST00000418375 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
TMEM248-203ENST00000418375 LRRC7Q96NW7 1537 aa19.82■□□□□ 0.76
TMEM248-203ENST00000418375 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms