RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CFAP74Q9C0B2 1584 aa10.39□□□□□ -0.75
CPS1-202ENST00000417946 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
CPS1-202ENST00000417946 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
CPS1-202ENST00000417946 KDM6BO15054 1643 aa10.39□□□□□ -0.75
CPS1-202ENST00000417946 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
CPS1-202ENST00000417946 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
CPS1-202ENST00000417946 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
CPS1-202ENST00000417946 INO80Q9ULG1 1556 aaPredicted RBP10.38□□□□□ -0.75
CPS1-202ENST00000417946 NEO1Q92859 1461 aa10.37□□□□□ -0.75
CPS1-202ENST00000417946 TSPOAP1O95153 1857 aa10.37□□□□□ -0.75
CPS1-202ENST00000417946 NAIPQ13075 1403 aa10.37□□□□□ -0.75
CPS1-202ENST00000417946 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
CPS1-202ENST00000417946 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 PLXNC1O60486 1568 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 KDM5CP41229 1560 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 ITGAEP38570 1179 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
CPS1-202ENST00000417946 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 RICTORQ6R327 1708 aa10.36□□□□□ -0.75
CPS1-202ENST00000417946 C9orf84Q5VXU9 1444 aa10.35□□□□□ -0.75
CPS1-202ENST00000417946 GABBR2O75899 941 aa10.35□□□□□ -0.75
CPS1-202ENST00000417946 EFCAB2Q5VUJ9 269 aa10.35□□□□□ -0.75
CPS1-202ENST00000417946 POGZQ7Z3K3 1410 aa10.34□□□□□ -0.75
CPS1-202ENST00000417946 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
CPS1-202ENST00000417946 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 FAM69CQ0P6D2 419 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 KIDINS220Q9ULH0 1771 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 SCAPERQ9BY12 1400 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
CPS1-202ENST00000417946 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
CPS1-202ENST00000417946 ATP7AQ04656 1500 aa10.31□□□□□ -0.76
CPS1-202ENST00000417946 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
CPS1-202ENST00000417946 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 ZMYM4Q5VZL5 1548 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 HECW2Q9P2P5 1572 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 TEX14Q8IWB6 1497 aa10.3□□□□□ -0.76
CPS1-202ENST00000417946 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
CPS1-202ENST00000417946 RTEL1-TNFRSF6BF6WH68 1400 aa10.29□□□□□ -0.76
CPS1-202ENST00000417946 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
CPS1-202ENST00000417946 AFAP1Q8N556 730 aa10.28□□□□□ -0.76
CPS1-202ENST00000417946 DENND4BO75064 1496 aaPredicted RBP10.28□□□□□ -0.76
CPS1-202ENST00000417946 MLH3Q9UHC1 1453 aa10.28□□□□□ -0.76
CPS1-202ENST00000417946 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.76
CPS1-202ENST00000417946 ANKRD30AQ9BXX3 1397 aa10.27□□□□□ -0.76
CPS1-202ENST00000417946 KIF15Q9NS87 1388 aa10.27□□□□□ -0.76
CPS1-202ENST00000417946 DIP2CQ9Y2E4 1556 aa10.27□□□□□ -0.76
CPS1-202ENST00000417946 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
CPS1-202ENST00000417946 UNC13BO14795 1591 aa10.26□□□□□ -0.77
CPS1-202ENST00000417946 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
CPS1-202ENST00000417946 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 BCORL1Q5H9F3 1711 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 KDM5DQ9BY66 1539 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 HRCP23327 699 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 DEPDC5O75140 1603 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
CPS1-202ENST00000417946 SIGLEC1Q9BZZ2 1709 aa10.24□□□□□ -0.77
CPS1-202ENST00000417946 ZRANB1Q9UGI0 708 aa10.24□□□□□ -0.77
CPS1-202ENST00000417946 EIF2AK4Q9P2K8 1649 aaKnown RBP10.24□□□□□ -0.77
CPS1-202ENST00000417946 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
CPS1-202ENST00000417946 PZPP20742 1482 aa10.23□□□□□ -0.77
CPS1-202ENST00000417946 RAPGEF3O95398 923 aa10.23□□□□□ -0.77
CPS1-202ENST00000417946 ERBINQ96RT1 1412 aa10.23□□□□□ -0.77
CPS1-202ENST00000417946 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
CPS1-202ENST00000417946 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
CPS1-202ENST00000417946 PLEKHG5O94827 1062 aa10.22□□□□□ -0.77
CPS1-202ENST00000417946 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
CPS1-202ENST00000417946 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
CPS1-202ENST00000417946 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
CPS1-202ENST00000417946 RNF17Q9BXT8 1623 aaKnown RBP10.22□□□□□ -0.77
CPS1-202ENST00000417946 DCBLD2Q96PD2 775 aa10.21□□□□□ -0.77
CPS1-202ENST00000417946 REREQ9P2R6 1566 aa10.21□□□□□ -0.78
CPS1-202ENST00000417946 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
CPS1-202ENST00000417946 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
CPS1-202ENST00000417946 A2MP01023 1474 aa10.19□□□□□ -0.78
CPS1-202ENST00000417946 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
CPS1-202ENST00000417946 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
CPS1-202ENST00000417946 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
CPS1-202ENST00000417946 AGLP35573 1532 aa10.15□□□□□ -0.78
CPS1-202ENST00000417946 CEP152O94986 1710 aa10.15□□□□□ -0.78
CPS1-202ENST00000417946 ATP10AO60312 1499 aa10.14□□□□□ -0.79
CPS1-202ENST00000417946 TET3O43151 1660 aa10.14□□□□□ -0.79
CPS1-202ENST00000417946 LMTK2Q8IWU2 1503 aa10.13□□□□□ -0.79
CPS1-202ENST00000417946 E9PCH4 1651 aa10.13□□□□□ -0.79
CPS1-202ENST00000417946 LHX8Q68G74 356 aa10.13□□□□□ -0.79
CPS1-202ENST00000417946 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
CPS1-202ENST00000417946 MPHOSPH9Q99550 1183 aa10.12□□□□□ -0.79
CPS1-202ENST00000417946 NUP155O75694 1391 aa10.12□□□□□ -0.79
CPS1-202ENST00000417946 ABCC3O15438 1527 aa10.12□□□□□ -0.79
CPS1-202ENST00000417946 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
CPS1-202ENST00000417946 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
CPS1-202ENST00000417946 PROM2Q8N271 834 aa10.11□□□□□ -0.79
CPS1-202ENST00000417946 EFCAB6Q5THR3 1501 aa10.11□□□□□ -0.79
CPS1-202ENST00000417946 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
CPS1-202ENST00000417946 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
CPS1-202ENST00000417946 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms