RNA–Protein interactions for RNA: ENST00000417542.1

AL355339.1-202, humanhuman

TSL 2 BASIC

Gene AL355339.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355339.1-202ENST00000417542 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
AL355339.1-202ENST00000417542 SUPT6HQ7KZ85 1726 aaKnown RBP9.97□□□□□ -0.81
AL355339.1-202ENST00000417542 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
AL355339.1-202ENST00000417542 GABBR2O75899 941 aa9.97□□□□□ -0.81
AL355339.1-202ENST00000417542 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
AL355339.1-202ENST00000417542 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
AL355339.1-202ENST00000417542 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
AL355339.1-202ENST00000417542 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
AL355339.1-202ENST00000417542 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
AL355339.1-202ENST00000417542 KIF14Q15058 1648 aa9.95□□□□□ -0.82
AL355339.1-202ENST00000417542 MYO3AQ8NEV4 1616 aa9.95□□□□□ -0.82
AL355339.1-202ENST00000417542 MROH2AA6NES4 1674 aa9.95□□□□□ -0.82
AL355339.1-202ENST00000417542 CEP170BQ9Y4F5 1589 aaPredicted RBP9.94□□□□□ -0.82
AL355339.1-202ENST00000417542 CPS1P31327 1500 aa9.94□□□□□ -0.82
AL355339.1-202ENST00000417542 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
AL355339.1-202ENST00000417542 RGS17Q9UGC6 210 aaPredicted RBP9.94□□□□□ -0.82
AL355339.1-202ENST00000417542 ZNF142P52746 1687 aaPredicted RBP9.93□□□□□ -0.82
AL355339.1-202ENST00000417542 SHANK2Q9UPX8 1470 aa9.93□□□□□ -0.82
AL355339.1-202ENST00000417542 SPDYE1Q8NFV5 336 aaPredicted RBP9.93□□□□□ -0.82
AL355339.1-202ENST00000417542 GGT6Q6P531 493 aa9.92□□□□□ -0.82
AL355339.1-202ENST00000417542 KIDINS220Q9ULH0 1771 aa9.92□□□□□ -0.82
AL355339.1-202ENST00000417542 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
AL355339.1-202ENST00000417542 CLIP1P30622 1438 aa9.91□□□□□ -0.82
AL355339.1-202ENST00000417542 TROQ12816 1431 aaPredicted RBP9.91□□□□□ -0.82
AL355339.1-202ENST00000417542 CDC42BPBQ9Y5S2 1711 aa9.9□□□□□ -0.82
AL355339.1-202ENST00000417542 ABCC1P33527 1531 aa9.9□□□□□ -0.82
AL355339.1-202ENST00000417542 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
AL355339.1-202ENST00000417542 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
AL355339.1-202ENST00000417542 ITSN2Q9NZM3 1697 aa9.89□□□□□ -0.83
AL355339.1-202ENST00000417542 DNMT1P26358 1616 aaKnown RBP9.89□□□□□ -0.83
AL355339.1-202ENST00000417542 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
AL355339.1-202ENST00000417542 SPAG9O60271 1321 aaKnown RBP9.88□□□□□ -0.83
AL355339.1-202ENST00000417542 A2ML1A8K2U0 1454 aa9.88□□□□□ -0.83
AL355339.1-202ENST00000417542 POTEAQ6S8J7 498 aa9.88□□□□□ -0.83
AL355339.1-202ENST00000417542 ANKLE2Q86XL3 938 aa9.87□□□□□ -0.83
AL355339.1-202ENST00000417542 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
AL355339.1-202ENST00000417542 POLR1AO95602 1720 aaPredicted RBP9.86□□□□□ -0.83
AL355339.1-202ENST00000417542 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.83
AL355339.1-202ENST00000417542 SAMD9LQ8IVG5 1584 aa9.86□□□□□ -0.83
AL355339.1-202ENST00000417542 NEURL4Q96JN8 1562 aa9.86□□□□□ -0.83
AL355339.1-202ENST00000417542 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
AL355339.1-202ENST00000417542 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
AL355339.1-202ENST00000417542 EHMT2Q96KQ7 1210 aa9.85□□□□□ -0.83
AL355339.1-202ENST00000417542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
AL355339.1-202ENST00000417542 ZBTB22O15209 634 aa9.84□□□□□ -0.83
AL355339.1-202ENST00000417542 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
AL355339.1-202ENST00000417542 A2MP01023 1474 aa9.84□□□□□ -0.83
AL355339.1-202ENST00000417542 NPHP4O75161 1426 aaPredicted RBP9.83□□□□□ -0.84
AL355339.1-202ENST00000417542 THEMISQ8N1K5 641 aaPredicted RBP9.83□□□□□ -0.84
AL355339.1-202ENST00000417542 TNRQ92752 1358 aa9.83□□□□□ -0.84
AL355339.1-202ENST00000417542 ATP7AQ04656 1500 aa9.82□□□□□ -0.84
AL355339.1-202ENST00000417542 LRRC7Q96NW7 1537 aa9.82□□□□□ -0.84
AL355339.1-202ENST00000417542 EEA1Q15075 1411 aa9.82□□□□□ -0.84
AL355339.1-202ENST00000417542 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
AL355339.1-202ENST00000417542 SYCP2Q9BX26 1530 aa9.81□□□□□ -0.84
AL355339.1-202ENST00000417542 PLXNC1O60486 1568 aa9.8□□□□□ -0.84
AL355339.1-202ENST00000417542 CDC42BPAQ5VT25 1732 aa9.8□□□□□ -0.84
AL355339.1-202ENST00000417542 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
AL355339.1-202ENST00000417542 RNF17Q9BXT8 1623 aaKnown RBP9.8□□□□□ -0.84
AL355339.1-202ENST00000417542 ARHGAP35Q9NRY4 1499 aa9.79□□□□□ -0.84
AL355339.1-202ENST00000417542 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
AL355339.1-202ENST00000417542 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
AL355339.1-202ENST00000417542 MED14O60244 1454 aa9.79□□□□□ -0.84
AL355339.1-202ENST00000417542 STRCP1A6NGW2 1772 aa9.78□□□□□ -0.84
AL355339.1-202ENST00000417542 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.84
AL355339.1-202ENST00000417542 UGGT1Q9NYU2 1555 aa9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 INO80Q9ULG1 1556 aaPredicted RBP9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 DEPDC5O75140 1603 aa9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 IQGAP1P46940 1657 aa9.77□□□□□ -0.85
AL355339.1-202ENST00000417542 MIA2Q96PC5 1412 aa9.76□□□□□ -0.85
AL355339.1-202ENST00000417542 KIF3BO15066 747 aa9.76□□□□□ -0.85
AL355339.1-202ENST00000417542 CFDP1Q9UEE9 299 aaPredicted RBP9.76□□□□□ -0.85
AL355339.1-202ENST00000417542 SYNMO15061 1565 aa9.75□□□□□ -0.85
AL355339.1-202ENST00000417542 KIAA1107Q9UPP5 1409 aa9.75□□□□□ -0.85
AL355339.1-202ENST00000417542 PZPP20742 1482 aa9.75□□□□□ -0.85
AL355339.1-202ENST00000417542 GPATCH8Q9UKJ3 1502 aaKnown RBP9.75□□□□□ -0.85
AL355339.1-202ENST00000417542 WASHC2CQ9Y4E1 1318 aa9.75□□□□□ -0.85
AL355339.1-202ENST00000417542 ADGBQ8N7X0 1667 aa9.74□□□□□ -0.85
AL355339.1-202ENST00000417542 CCDC18Q5T9S5 1454 aa9.74□□□□□ -0.85
AL355339.1-202ENST00000417542 PLEKHH2Q8IVE3 1493 aa9.74□□□□□ -0.85
AL355339.1-202ENST00000417542 NLRP1Q9C000 1473 aa9.74□□□□□ -0.85
AL355339.1-202ENST00000417542 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
AL355339.1-202ENST00000417542 TRIM52Q96A61 297 aa9.73□□□□□ -0.85
AL355339.1-202ENST00000417542 SSUH2Q9Y2M2 353 aa9.73□□□□□ -0.85
AL355339.1-202ENST00000417542 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
AL355339.1-202ENST00000417542 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
AL355339.1-202ENST00000417542 KDM5DQ9BY66 1539 aa9.72□□□□□ -0.85
AL355339.1-202ENST00000417542 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
AL355339.1-202ENST00000417542 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
AL355339.1-202ENST00000417542 ZNF644Q9H582 1327 aaPredicted RBP9.7□□□□□ -0.86
AL355339.1-202ENST00000417542 CASKIN1Q8WXD9 1431 aa9.7□□□□□ -0.86
AL355339.1-202ENST00000417542 XIRP1Q702N8 1843 aaKnown RBP9.69□□□□□ -0.86
AL355339.1-202ENST00000417542 ZC3H13Q5T200 1668 aaKnown RBP9.68□□□□□ -0.86
AL355339.1-202ENST00000417542 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
AL355339.1-202ENST00000417542 MEX3CQ5U5Q3 659 aaKnown RBP9.68□□□□□ -0.86
AL355339.1-202ENST00000417542 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
AL355339.1-202ENST00000417542 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
AL355339.1-202ENST00000417542 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms