RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
SNRNP25-204ENST00000417493 ABCC5O15440 1437 aa16.84■□□□□ 0.29
SNRNP25-204ENST00000417493 ZC3H13Q5T200 1668 aaKnown RBP16.84■□□□□ 0.29
SNRNP25-204ENST00000417493 FAM50AQ14320 339 aaKnown RBP16.83■□□□□ 0.28
SNRNP25-204ENST00000417493 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
SNRNP25-204ENST00000417493 WASHC2CQ9Y4E1 1318 aa16.83■□□□□ 0.28
SNRNP25-204ENST00000417493 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
SNRNP25-204ENST00000417493 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
SNRNP25-204ENST00000417493 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
SNRNP25-204ENST00000417493 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
SNRNP25-204ENST00000417493 KANK1Q14678 1352 aa16.77■□□□□ 0.27
SNRNP25-204ENST00000417493 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
SNRNP25-204ENST00000417493 HSPA2P54652 639 aa16.76■□□□□ 0.27
SNRNP25-204ENST00000417493 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
SNRNP25-204ENST00000417493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNRNP25-204ENST00000417493 ZNF142P52746 1687 aaPredicted RBP16.75■□□□□ 0.27
SNRNP25-204ENST00000417493 PZPP20742 1482 aa16.75■□□□□ 0.27
SNRNP25-204ENST00000417493 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
SNRNP25-204ENST00000417493 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
SNRNP25-204ENST00000417493 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
SNRNP25-204ENST00000417493 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SNRNP25-204ENST00000417493 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
SNRNP25-204ENST00000417493 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
SNRNP25-204ENST00000417493 CEP152O94986 1710 aa16.72■□□□□ 0.27
SNRNP25-204ENST00000417493 TNRQ92752 1358 aa16.71■□□□□ 0.27
SNRNP25-204ENST00000417493 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
SNRNP25-204ENST00000417493 CAMSAP1Q5T5Y3 1602 aa16.7■□□□□ 0.26
SNRNP25-204ENST00000417493 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
SNRNP25-204ENST00000417493 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
SNRNP25-204ENST00000417493 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
SNRNP25-204ENST00000417493 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
SNRNP25-204ENST00000417493 NLRP1Q9C000 1473 aa16.68■□□□□ 0.26
SNRNP25-204ENST00000417493 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
SNRNP25-204ENST00000417493 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
SNRNP25-204ENST00000417493 PPARGC1BQ86YN6 1023 aaKnown RBP16.67■□□□□ 0.26
SNRNP25-204ENST00000417493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.266e-9■■■■■ 30.4
SNRNP25-204ENST00000417493 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
SNRNP25-204ENST00000417493 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
SNRNP25-204ENST00000417493 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
SNRNP25-204ENST00000417493 PTPRTO14522 1441 aa16.64■□□□□ 0.25
SNRNP25-204ENST00000417493 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
SNRNP25-204ENST00000417493 PKD2Q13563 968 aa16.64■□□□□ 0.25
SNRNP25-204ENST00000417493 FBXO31Q5XUX0 539 aaPredicted RBP16.63■□□□□ 0.25
SNRNP25-204ENST00000417493 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
SNRNP25-204ENST00000417493 LMTK2Q8IWU2 1503 aa16.63■□□□□ 0.25
SNRNP25-204ENST00000417493 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
SNRNP25-204ENST00000417493 ITGAEP38570 1179 aa16.62■□□□□ 0.25
SNRNP25-204ENST00000417493 VWDEQ8N2E2 1590 aa16.61■□□□□ 0.25
SNRNP25-204ENST00000417493 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
SNRNP25-204ENST00000417493 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
SNRNP25-204ENST00000417493 UNC13BO14795 1591 aa16.59■□□□□ 0.25
SNRNP25-204ENST00000417493 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
SNRNP25-204ENST00000417493 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
SNRNP25-204ENST00000417493 EFCAB6Q5THR3 1501 aa16.58■□□□□ 0.24
SNRNP25-204ENST00000417493 TET3O43151 1660 aa16.58■□□□□ 0.24
SNRNP25-204ENST00000417493 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
SNRNP25-204ENST00000417493 KDM5AP29375 1690 aaKnown RBP16.55■□□□□ 0.24
SNRNP25-204ENST00000417493 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
SNRNP25-204ENST00000417493 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
SNRNP25-204ENST00000417493 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
SNRNP25-204ENST00000417493 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
SNRNP25-204ENST00000417493 FBXO41Q8TF61 875 aa16.51■□□□□ 0.23
SNRNP25-204ENST00000417493 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
SNRNP25-204ENST00000417493 CERKQ8TCT0 537 aa16.5■□□□□ 0.23
SNRNP25-204ENST00000417493 NUP155O75694 1391 aa16.5■□□□□ 0.23
SNRNP25-204ENST00000417493 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
SNRNP25-204ENST00000417493 PIK3C2BO00750 1634 aa16.48■□□□□ 0.23
SNRNP25-204ENST00000417493 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
SNRNP25-204ENST00000417493 NOS1P29475 1434 aa16.48■□□□□ 0.23
SNRNP25-204ENST00000417493 MED14O60244 1454 aa16.47■□□□□ 0.23
SNRNP25-204ENST00000417493 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
SNRNP25-204ENST00000417493 E9PCH4 1651 aa16.46■□□□□ 0.23
SNRNP25-204ENST00000417493 IQGAP1P46940 1657 aa16.46■□□□□ 0.23
SNRNP25-204ENST00000417493 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
SNRNP25-204ENST00000417493 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
SNRNP25-204ENST00000417493 SYNMO15061 1565 aa16.46■□□□□ 0.23
SNRNP25-204ENST00000417493 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 NAIPQ13075 1403 aa16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 SLIT1O75093 1534 aa16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 ADGRB3O60242 1522 aa16.45■□□□□ 0.22
SNRNP25-204ENST00000417493 SCAF11Q99590 1463 aaKnown RBP16.44■□□□□ 0.22
SNRNP25-204ENST00000417493 IDI1Q13907 227 aa16.43■□□□□ 0.22
SNRNP25-204ENST00000417493 ARHGAP23Q9P227 1491 aa16.42■□□□□ 0.22
SNRNP25-204ENST00000417493 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
SNRNP25-204ENST00000417493 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
SNRNP25-204ENST00000417493 TMEM2Q9UHN6 1383 aa16.41■□□□□ 0.22
SNRNP25-204ENST00000417493 SPHKAPQ2M3C7 1700 aa16.41■□□□□ 0.22
SNRNP25-204ENST00000417493 CPS1P31327 1500 aa16.4■□□□□ 0.22
SNRNP25-204ENST00000417493 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
SNRNP25-204ENST00000417493 ZNF335Q9H4Z2 1342 aaPredicted RBP16.39■□□□□ 0.21
SNRNP25-204ENST00000417493 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
SNRNP25-204ENST00000417493 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNRNP25-204ENST00000417493 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
SNRNP25-204ENST00000417493 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
SNRNP25-204ENST00000417493 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
SNRNP25-204ENST00000417493 KIF1BO60333 1816 aa16.34■□□□□ 0.21
SNRNP25-204ENST00000417493 LTKP29376 864 aa16.33■□□□□ 0.2
SNRNP25-204ENST00000417493 BCANQ96GW7 911 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms