RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
CASP4-202ENST00000417440 KIDINS220Q9ULH0 1771 aa11.65□□□□□ -0.54
CASP4-202ENST00000417440 CDC42BPAQ5VT25 1732 aa11.64□□□□□ -0.55
CASP4-202ENST00000417440 ILDR2Q71H61 639 aa11.64□□□□□ -0.55
CASP4-202ENST00000417440 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
CASP4-202ENST00000417440 A2MP01023 1474 aa11.63□□□□□ -0.55
CASP4-202ENST00000417440 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
CASP4-202ENST00000417440 CAMSAP1Q5T5Y3 1602 aa11.61□□□□□ -0.55
CASP4-202ENST00000417440 SUPT6HQ7KZ85 1726 aaKnown RBP11.61□□□□□ -0.55
CASP4-202ENST00000417440 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
CASP4-202ENST00000417440 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
CASP4-202ENST00000417440 NPATQ14207 1427 aa11.6□□□□□ -0.55
CASP4-202ENST00000417440 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
CASP4-202ENST00000417440 ATP7AQ04656 1500 aa11.6□□□□□ -0.55
CASP4-202ENST00000417440 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
CASP4-202ENST00000417440 UBAP1LF5GYI3 381 aa11.59□□□□□ -0.55
CASP4-202ENST00000417440 LTBP4Q8N2S1 1624 aa11.58□□□□□ -0.56
CASP4-202ENST00000417440 PTPRKQ15262 1439 aa11.58□□□□□ -0.56
CASP4-202ENST00000417440 CLTCQ00610 1675 aaKnown RBP11.57□□□□□ -0.56
CASP4-202ENST00000417440 KIF3BO15066 747 aa11.57□□□□□ -0.56
CASP4-202ENST00000417440 PKD2Q13563 968 aa11.57□□□□□ -0.56
CASP4-202ENST00000417440 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
CASP4-202ENST00000417440 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
CASP4-202ENST00000417440 SOCS7O14512 581 aa11.55□□□□□ -0.56
CASP4-202ENST00000417440 MROH2AA6NES4 1674 aa11.55□□□□□ -0.56
CASP4-202ENST00000417440 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
CASP4-202ENST00000417440 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
CASP4-202ENST00000417440 PLXNC1O60486 1568 aa11.54□□□□□ -0.56
CASP4-202ENST00000417440 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
CASP4-202ENST00000417440 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
CASP4-202ENST00000417440 PIP4K2BP78356 416 aa11.53□□□□□ -0.56
CASP4-202ENST00000417440 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
CASP4-202ENST00000417440 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
CASP4-202ENST00000417440 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
CASP4-202ENST00000417440 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
CASP4-202ENST00000417440 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 SPATA31D1Q6ZQQ2 1576 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 TNRQ92752 1358 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
CASP4-202ENST00000417440 PROM2Q8N271 834 aa11.5□□□□□ -0.57
CASP4-202ENST00000417440 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
CASP4-202ENST00000417440 TCOF1Q13428 1488 aaKnown RBP11.5□□□□□ -0.57
CASP4-202ENST00000417440 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
CASP4-202ENST00000417440 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
CASP4-202ENST00000417440 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
CASP4-202ENST00000417440 CCDC141Q6ZP82 1450 aa11.49□□□□□ -0.57
CASP4-202ENST00000417440 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
CASP4-202ENST00000417440 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
CASP4-202ENST00000417440 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
CASP4-202ENST00000417440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
CASP4-202ENST00000417440 TOM1O60784 492 aa11.47□□□□□ -0.57
CASP4-202ENST00000417440 THEMISQ8N1K5 641 aaPredicted RBP11.47□□□□□ -0.57
CASP4-202ENST00000417440 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.57
CASP4-202ENST00000417440 DNMT1P26358 1616 aaKnown RBP11.46□□□□□ -0.57
CASP4-202ENST00000417440 HSPA1LP34931 641 aa11.46□□□□□ -0.57
CASP4-202ENST00000417440 KDM5DQ9BY66 1539 aa11.45□□□□□ -0.58
CASP4-202ENST00000417440 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
CASP4-202ENST00000417440 PZPP20742 1482 aa11.44□□□□□ -0.58
CASP4-202ENST00000417440 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
CASP4-202ENST00000417440 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
CASP4-202ENST00000417440 SPDYE2BA6NHP3 402 aa11.42□□□□□ -0.58
CASP4-202ENST00000417440 SPDYE6P0CI01 402 aa11.42□□□□□ -0.58
CASP4-202ENST00000417440 SPDYE2Q495Y8 402 aa11.42□□□□□ -0.58
CASP4-202ENST00000417440 NPHP4O75161 1426 aaPredicted RBP11.42□□□□□ -0.58
CASP4-202ENST00000417440 FAM135AQ9P2D6 1515 aa11.41□□□□□ -0.58
CASP4-202ENST00000417440 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
CASP4-202ENST00000417440 NLRP1Q9C000 1473 aa11.4□□□□□ -0.58
CASP4-202ENST00000417440 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
CASP4-202ENST00000417440 CPS1P31327 1500 aa11.4□□□□□ -0.59
CASP4-202ENST00000417440 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
CASP4-202ENST00000417440 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
CASP4-202ENST00000417440 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
CASP4-202ENST00000417440 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
CASP4-202ENST00000417440 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
CASP4-202ENST00000417440 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
CASP4-202ENST00000417440 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CASP4-202ENST00000417440 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
CASP4-202ENST00000417440 ABCC3O15438 1527 aa11.36□□□□□ -0.59
CASP4-202ENST00000417440 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
CASP4-202ENST00000417440 VWDEQ8N2E2 1590 aa11.36□□□□□ -0.59
CASP4-202ENST00000417440 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
CASP4-202ENST00000417440 ERVK-7P63135 1459 aa11.35□□□□□ -0.59
CASP4-202ENST00000417440 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
CASP4-202ENST00000417440 MED14O60244 1454 aa11.34□□□□□ -0.59
CASP4-202ENST00000417440 LTKP29376 864 aa11.34□□□□□ -0.59
CASP4-202ENST00000417440 CHIC2Q9UKJ5 165 aa11.34□□□□□ -0.59
CASP4-202ENST00000417440 KIF15Q9NS87 1388 aa11.33□□□□□ -0.6
CASP4-202ENST00000417440 EID1Q9Y6B2 187 aa11.33□□□□□ -0.6
CASP4-202ENST00000417440 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
CASP4-202ENST00000417440 DEPDC5O75140 1603 aa11.32□□□□□ -0.6
CASP4-202ENST00000417440 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
CASP4-202ENST00000417440 MAST1Q9Y2H9 1570 aa11.32□□□□□ -0.6
CASP4-202ENST00000417440 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
CASP4-202ENST00000417440 IQGAP1P46940 1657 aa11.31□□□□□ -0.6
CASP4-202ENST00000417440 SCAF11Q99590 1463 aaKnown RBP11.31□□□□□ -0.6
CASP4-202ENST00000417440 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
CASP4-202ENST00000417440 ABCC5O15440 1437 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms