RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CAMSAP1Q5T5Y3 1602 aa39.54■■■■□ 3.92
VEGFA-208ENST00000417285 PKD2Q13563 968 aa39.54■■■■□ 3.92
VEGFA-208ENST00000417285 KDM5DQ9BY66 1539 aa39.54■■■■□ 3.92
VEGFA-208ENST00000417285 FBXO31Q5XUX0 539 aaPredicted RBP39.52■■■■□ 3.92
VEGFA-208ENST00000417285 NCKAP5LQ9HCH0 1330 aa39.5■■■■□ 3.91
VEGFA-208ENST00000417285 MYO3AQ8NEV4 1616 aa39.48■■■■□ 3.91
VEGFA-208ENST00000417285 PZPP20742 1482 aa39.48■■■■□ 3.91
VEGFA-208ENST00000417285 PLA2R1Q13018 1463 aa39.48■■■■□ 3.91
VEGFA-208ENST00000417285 TNRQ92752 1358 aa39.47■■■■□ 3.91
VEGFA-208ENST00000417285 CEP170BQ9Y4F5 1589 aaPredicted RBP39.47■■■■□ 3.91
VEGFA-208ENST00000417285 A2ML1A8K2U0 1454 aa39.45■■■■□ 3.91
VEGFA-208ENST00000417285 ZNF142P52746 1687 aaPredicted RBP39.45■■■■□ 3.91
VEGFA-208ENST00000417285 ABCC5O15440 1437 aa39.42■■■■□ 3.9
VEGFA-208ENST00000417285 FGD6Q6ZV73 1430 aa39.4■■■■□ 3.9
VEGFA-208ENST00000417285 PTPN23Q9H3S7 1636 aa39.39■■■■□ 3.9
VEGFA-208ENST00000417285 DUOX2Q9NRD8 1548 aa39.39■■■■□ 3.9
VEGFA-208ENST00000417285 SHANK2Q9UPX8 1470 aa39.38■■■■□ 3.9
VEGFA-208ENST00000417285 TCOF1Q13428 1488 aaKnown RBP39.37■■■■□ 3.89
VEGFA-208ENST00000417285 RRP7BPQ9NSQ0 103 aa39.37■■■■□ 3.89
VEGFA-208ENST00000417285 RNF17Q9BXT8 1623 aaKnown RBP39.36■■■■□ 3.89
VEGFA-208ENST00000417285 KIF15Q9NS87 1388 aa39.36■■■■□ 3.89
VEGFA-208ENST00000417285 EIF2AK4Q9P2K8 1649 aaKnown RBP39.36■■■■□ 3.89
VEGFA-208ENST00000417285 THEMISQ8N1K5 641 aaPredicted RBP39.34■■■■□ 3.89
VEGFA-208ENST00000417285 DAPK1P53355 1430 aa39.32■■■■□ 3.89
VEGFA-208ENST00000417285 DNMT1P26358 1616 aaKnown RBP39.32■■■■□ 3.88
VEGFA-208ENST00000417285 NLRP1Q9C000 1473 aa39.3■■■■□ 3.88
VEGFA-208ENST00000417285 ABCC3O15438 1527 aa39.3■■■■□ 3.88
VEGFA-208ENST00000417285 LTBP4Q8N2S1 1624 aa39.29■■■■□ 3.88
VEGFA-208ENST00000417285 ERBINQ96RT1 1412 aa39.27■■■■□ 3.88
VEGFA-208ENST00000417285 ANKLE2Q86XL3 938 aa39.26■■■■□ 3.88
VEGFA-208ENST00000417285 ANKRD30AQ9BXX3 1397 aa39.25■■■■□ 3.87
VEGFA-208ENST00000417285 CHIC2Q9UKJ5 165 aa39.24■■■■□ 3.87
VEGFA-208ENST00000417285 ZC3H13Q5T200 1668 aaKnown RBP39.24■■■■□ 3.87
VEGFA-208ENST00000417285 IQSEC2Q5JU85 1478 aa39.23■■■■□ 3.87
VEGFA-208ENST00000417285 ZNF335Q9H4Z2 1342 aaPredicted RBP39.22■■■■□ 3.87
VEGFA-208ENST00000417285 CROCC2H7BZ55 1655 aa39.19■■■■□ 3.86
VEGFA-208ENST00000417285 MROH1Q8NDA8 1641 aa39.19■■■■□ 3.86
VEGFA-208ENST00000417285 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.19■■■■□ 3.863e-7■■□□□ 14.3
VEGFA-208ENST00000417285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.18■■■■□ 3.861e-14■■■□□ 16.5
VEGFA-208ENST00000417285 FAM50AQ14320 339 aaKnown RBP39.17■■■■□ 3.86
VEGFA-208ENST00000417285 UGGT1Q9NYU2 1555 aa39.16■■■■□ 3.86
VEGFA-208ENST00000417285 KANK1Q14678 1352 aa39.16■■■■□ 3.86
VEGFA-208ENST00000417285 SPATA31D1Q6ZQQ2 1576 aa39.15■■■■□ 3.86
VEGFA-208ENST00000417285 ERVK-7P63135 1459 aa39.14■■■■□ 3.86
VEGFA-208ENST00000417285 ARHGAP31Q2M1Z3 1444 aa39.14■■■■□ 3.86
VEGFA-208ENST00000417285 PRDM15P57071 1507 aaPredicted RBP39.1■■■■□ 3.85
VEGFA-208ENST00000417285 ADGRL2O95490 1459 aa39.04■■■■□ 3.84
VEGFA-208ENST00000417285 CEP152O94986 1710 aa39.03■■■■□ 3.84
VEGFA-208ENST00000417285 MED14O60244 1454 aa39.03■■■■□ 3.84
VEGFA-208ENST00000417285 NEURL4Q96JN8 1562 aa39.01■■■■□ 3.84
VEGFA-208ENST00000417285 POLR1AO95602 1720 aaPredicted RBP39■■■■□ 3.83
VEGFA-208ENST00000417285 DEPDC5O75140 1603 aa39■■■■□ 3.83
VEGFA-208ENST00000417285 NPHP4O75161 1426 aaPredicted RBP39■■■■□ 3.83
VEGFA-208ENST00000417285 UBAP1LF5GYI3 381 aa38.97■■■■□ 3.83
VEGFA-208ENST00000417285 CFAP65Q6ZU64 1925 aaKnown RBP38.95■■■■□ 3.83
VEGFA-208ENST00000417285 LMTK2Q8IWU2 1503 aa38.94■■■■□ 3.82
VEGFA-208ENST00000417285 ANKRD50Q9ULJ7 1429 aa38.93■■■■□ 3.82
VEGFA-208ENST00000417285 VWDEQ8N2E2 1590 aa38.91■■■■□ 3.82
VEGFA-208ENST00000417285 CPS1P31327 1500 aa38.9■■■■□ 3.82
VEGFA-208ENST00000417285 TXNDC2Q86VQ3 553 aa38.88■■■■□ 3.81
VEGFA-208ENST00000417285 STAG3Q9UJ98 1225 aa38.88■■■■□ 3.81
VEGFA-208ENST00000417285 EID1Q9Y6B2 187 aa38.87■■■■□ 3.81
VEGFA-208ENST00000417285 IDI1Q13907 227 aa38.84■■■■□ 3.81
VEGFA-208ENST00000417285 UBR1Q8IWV7 1749 aa38.83■■■■□ 3.81
VEGFA-208ENST00000417285 LTKP29376 864 aa38.83■■■■□ 3.81
VEGFA-208ENST00000417285 SCAF11Q99590 1463 aaKnown RBP38.81■■■■□ 3.8
VEGFA-208ENST00000417285 ARHGAP23Q9P227 1491 aa38.81■■■■□ 3.8
VEGFA-208ENST00000417285 SLC52A1Q9NWF4 448 aa38.81■■■■□ 3.8
VEGFA-208ENST00000417285 ROCK1Q13464 1354 aa38.81■■■■□ 3.8
VEGFA-208ENST00000417285 SLIT1O75093 1534 aa38.8■■■■□ 3.8
VEGFA-208ENST00000417285 TOM1O60784 492 aa38.8■■■■□ 3.8
VEGFA-208ENST00000417285 IQGAP1P46940 1657 aa38.8■■■■□ 3.8
VEGFA-208ENST00000417285 TMEM2Q9UHN6 1383 aa38.77■■■■□ 3.8
VEGFA-208ENST00000417285 NOS1P29475 1434 aa38.77■■■■□ 3.8
VEGFA-208ENST00000417285 PPARGC1BQ86YN6 1023 aaKnown RBP38.76■■■■□ 3.8
VEGFA-208ENST00000417285 EFCAB6Q5THR3 1501 aa38.75■■■■□ 3.79
VEGFA-208ENST00000417285 RPRD2Q5VT52 1461 aaKnown RBP38.73■■■■□ 3.79
VEGFA-208ENST00000417285 PIK3C2BO00750 1634 aa38.71■■■■□ 3.79
VEGFA-208ENST00000417285 ITGAEP38570 1179 aa38.68■■■■□ 3.78
VEGFA-208ENST00000417285 KDM5AP29375 1690 aaKnown RBP38.67■■■■□ 3.78
VEGFA-208ENST00000417285 SYNMO15061 1565 aa38.65■■■■□ 3.78
VEGFA-208ENST00000417285 DISP3Q9P2K9 1392 aa38.63■■■■□ 3.77
VEGFA-208ENST00000417285 PIP4K2BP78356 416 aa38.63■■■■□ 3.77
VEGFA-208ENST00000417285 SCAF1Q9H7N4 1312 aaKnown RBP38.63■■■■□ 3.77
VEGFA-208ENST00000417285 HDGFP51858 240 aaKnown RBP38.59■■■■□ 3.77
VEGFA-208ENST00000417285 LRRC7Q96NW7 1537 aa38.58■■■■□ 3.77
VEGFA-208ENST00000417285 TET3O43151 1660 aa38.58■■■■□ 3.77
VEGFA-208ENST00000417285 UNC13BO14795 1591 aa38.57■■■■□ 3.76
VEGFA-208ENST00000417285 NUP155O75694 1391 aa38.55■■■■□ 3.76
VEGFA-208ENST00000417285 ADGRB3O60242 1522 aa38.53■■■■□ 3.76
VEGFA-208ENST00000417285 HSPA1LP34931 641 aa38.51■■■■□ 3.76
VEGFA-208ENST00000417285 STRCP1A6NGW2 1772 aa38.5■■■■□ 3.75
VEGFA-208ENST00000417285 KCNA6P17658 529 aa38.49■■■■□ 3.75
VEGFA-208ENST00000417285 SLC26A8Q96RN1 970 aa38.49■■■■□ 3.75
VEGFA-208ENST00000417285 BCANQ96GW7 911 aa38.48■■■■□ 3.75
VEGFA-208ENST00000417285 GCC2Q8IWJ2 1684 aa38.47■■■■□ 3.75
VEGFA-208ENST00000417285 RRBP1Q9P2E9 1410 aaKnown RBP38.45■■■■□ 3.75
VEGFA-208ENST00000417285 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.44■■■■□ 3.74
VEGFA-208ENST00000417285 IQGAP3Q86VI3 1631 aa38.43■■■■□ 3.74
VEGFA-208ENST00000417285 CHGAP10645 457 aaKnown RBP38.43■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms