RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 XIRP1Q702N8 1843 aaKnown RBP14.58□□□□□ -0.08
SMIM12-201ENST00000417239 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMIM12-201ENST00000417239 GGT6Q6P531 493 aa14.58□□□□□ -0.08
SMIM12-201ENST00000417239 PZPP20742 1482 aa14.57□□□□□ -0.08
SMIM12-201ENST00000417239 FAM135AQ9P2D6 1515 aa14.57□□□□□ -0.08
SMIM12-201ENST00000417239 ZNF777Q9ULD5 760 aaPredicted RBP14.57□□□□□ -0.08
SMIM12-201ENST00000417239 ZC3H13Q5T200 1668 aaKnown RBP14.57□□□□□ -0.08
SMIM12-201ENST00000417239 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
SMIM12-201ENST00000417239 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
SMIM12-201ENST00000417239 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
SMIM12-201ENST00000417239 RGS17Q9UGC6 210 aaPredicted RBP14.56□□□□□ -0.08
SMIM12-201ENST00000417239 TNRQ92752 1358 aa14.56□□□□□ -0.08
SMIM12-201ENST00000417239 FYCO1Q9BQS8 1478 aa14.56□□□□□ -0.08
SMIM12-201ENST00000417239 NPHP4O75161 1426 aaPredicted RBP14.55□□□□□ -0.08
SMIM12-201ENST00000417239 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
SMIM12-201ENST00000417239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.54□□□□□ -0.08
SMIM12-201ENST00000417239 SETD1AO15047 1707 aaKnown RBP14.54□□□□□ -0.08
SMIM12-201ENST00000417239 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
SMIM12-201ENST00000417239 NLRP1Q9C000 1473 aa14.52□□□□□ -0.08
SMIM12-201ENST00000417239 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
SMIM12-201ENST00000417239 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
SMIM12-201ENST00000417239 TIAM1Q13009 1591 aa14.51□□□□□ -0.09
SMIM12-201ENST00000417239 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
SMIM12-201ENST00000417239 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
SMIM12-201ENST00000417239 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
SMIM12-201ENST00000417239 UBR1Q8IWV7 1749 aa14.48□□□□□ -0.09
SMIM12-201ENST00000417239 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
SMIM12-201ENST00000417239 MIA2Q96PC5 1412 aa14.47□□□□□ -0.09
SMIM12-201ENST00000417239 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
SMIM12-201ENST00000417239 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
SMIM12-201ENST00000417239 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
SMIM12-201ENST00000417239 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
SMIM12-201ENST00000417239 ZNF644Q9H582 1327 aaPredicted RBP14.42□□□□□ -0.1
SMIM12-201ENST00000417239 POTEAQ6S8J7 498 aa14.42□□□□□ -0.1
SMIM12-201ENST00000417239 KIF3BO15066 747 aa14.41□□□□□ -0.1
SMIM12-201ENST00000417239 CFAP65Q6ZU64 1925 aaKnown RBP14.41□□□□□ -0.1
SMIM12-201ENST00000417239 CEP152O94986 1710 aa14.41□□□□□ -0.1
SMIM12-201ENST00000417239 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
SMIM12-201ENST00000417239 ABCC3O15438 1527 aa14.4□□□□□ -0.1
SMIM12-201ENST00000417239 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
SMIM12-201ENST00000417239 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
SMIM12-201ENST00000417239 ERVK-7P63135 1459 aa14.38□□□□□ -0.11
SMIM12-201ENST00000417239 SCAF11Q99590 1463 aaKnown RBP14.38□□□□□ -0.11
SMIM12-201ENST00000417239 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
SMIM12-201ENST00000417239 MROH1Q8NDA8 1641 aa14.37□□□□□ -0.11
SMIM12-201ENST00000417239 EIF2AK4Q9P2K8 1649 aaKnown RBP14.37□□□□□ -0.11
SMIM12-201ENST00000417239 SLIT1O75093 1534 aa14.37□□□□□ -0.11
SMIM12-201ENST00000417239 CAMSAP2Q08AD1 1489 aa14.37□□□□□ -0.11
SMIM12-201ENST00000417239 ARHGAP23Q9P227 1491 aa14.37□□□□□ -0.11
SMIM12-201ENST00000417239 MTUS2Q5JR59 1369 aa14.36□□□□□ -0.11
SMIM12-201ENST00000417239 NCOA2Q15596 1464 aa14.36□□□□□ -0.11
SMIM12-201ENST00000417239 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
SMIM12-201ENST00000417239 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
SMIM12-201ENST00000417239 MAP3K1Q13233 1512 aa14.35□□□□□ -0.11
SMIM12-201ENST00000417239 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
SMIM12-201ENST00000417239 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
SMIM12-201ENST00000417239 PIK3C2BO00750 1634 aa14.31□□□□□ -0.12
SMIM12-201ENST00000417239 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
SMIM12-201ENST00000417239 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
SMIM12-201ENST00000417239 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
SMIM12-201ENST00000417239 LTKP29376 864 aa14.29□□□□□ -0.12
SMIM12-201ENST00000417239 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
SMIM12-201ENST00000417239 COL16A1Q07092 1604 aaPredicted RBP14.29□□□□□ -0.12
SMIM12-201ENST00000417239 TMEM94Q12767 1356 aa14.27□□□□□ -0.12
SMIM12-201ENST00000417239 TET3O43151 1660 aa14.26□□□□□ -0.13
SMIM12-201ENST00000417239 PRDM15P57071 1507 aaPredicted RBP14.25□□□□□ -0.13
SMIM12-201ENST00000417239 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
SMIM12-201ENST00000417239 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
SMIM12-201ENST00000417239 LRP6O75581 1613 aa14.25□□□□□ -0.13
SMIM12-201ENST00000417239 SHPRHQ149N8 1683 aa14.24□□□□□ -0.13
SMIM12-201ENST00000417239 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMIM12-201ENST00000417239 NKTRP30414 1462 aaKnown RBP14.24□□□□□ -0.13
SMIM12-201ENST00000417239 JCADQ9P266 1359 aa14.22□□□□□ -0.13
SMIM12-201ENST00000417239 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
SMIM12-201ENST00000417239 ARHGAP31Q2M1Z3 1444 aa14.22□□□□□ -0.13
SMIM12-201ENST00000417239 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
SMIM12-201ENST00000417239 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
SMIM12-201ENST00000417239 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
SMIM12-201ENST00000417239 EID1Q9Y6B2 187 aa14.2□□□□□ -0.14
SMIM12-201ENST00000417239 CROCC2H7BZ55 1655 aa14.19□□□□□ -0.14
SMIM12-201ENST00000417239 DUOX2Q9NRD8 1548 aa14.19□□□□□ -0.14
SMIM12-201ENST00000417239 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
SMIM12-201ENST00000417239 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
SMIM12-201ENST00000417239 KCNA6P17658 529 aa14.18□□□□□ -0.14
SMIM12-201ENST00000417239 RBM33Q96EV2 1170 aaKnown RBP14.18□□□□□ -0.14
SMIM12-201ENST00000417239 MYO5BQ9ULV0 1848 aa14.18□□□□□ -0.14
SMIM12-201ENST00000417239 AHDC1Q5TGY3 1603 aaPredicted RBP14.17□□□□□ -0.14
SMIM12-201ENST00000417239 MSH6P52701 1360 aa14.17□□□□□ -0.14
SMIM12-201ENST00000417239 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
SMIM12-201ENST00000417239 ADGRB3O60242 1522 aa14.16□□□□□ -0.14
SMIM12-201ENST00000417239 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
SMIM12-201ENST00000417239 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
SMIM12-201ENST00000417239 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
SMIM12-201ENST00000417239 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
SMIM12-201ENST00000417239 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.15
SMIM12-201ENST00000417239 DIP2AQ14689 1571 aa14.14□□□□□ -0.15
SMIM12-201ENST00000417239 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
SMIM12-201ENST00000417239 ZNF772Q68DY9 489 aaPredicted RBP14.13□□□□□ -0.15
SMIM12-201ENST00000417239 SLC26A8Q96RN1 970 aa14.13□□□□□ -0.15
SMIM12-201ENST00000417239 GCC2Q8IWJ2 1684 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms