RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 WASHC2CQ9Y4E1 1318 aa34.34■■■■□ 3.09
ACTB-203ENST00000417101 KDM5DQ9BY66 1539 aa34.34■■■■□ 3.09
ACTB-203ENST00000417101 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
ACTB-203ENST00000417101 FBXO31Q5XUX0 539 aaPredicted RBP34.32■■■■□ 3.08
ACTB-203ENST00000417101 PLA2R1Q13018 1463 aa34.31■■■■□ 3.08
ACTB-203ENST00000417101 FAM135AQ9P2D6 1515 aa34.3■■■■□ 3.08
ACTB-203ENST00000417101 PKD2Q13563 968 aa34.29■■■■□ 3.08
ACTB-203ENST00000417101 LTBP4Q8N2S1 1624 aa34.29■■■■□ 3.08
ACTB-203ENST00000417101 MAST1Q9Y2H9 1570 aa34.28■■■■□ 3.08
ACTB-203ENST00000417101 A2ML1A8K2U0 1454 aa34.28■■■■□ 3.08
ACTB-203ENST00000417101 TNRQ92752 1358 aa34.28■■■■□ 3.08
ACTB-203ENST00000417101 APLP2Q06481 763 aa34.28■■■■□ 3.08
ACTB-203ENST00000417101 PZPP20742 1482 aa34.27■■■■□ 3.08
ACTB-203ENST00000417101 TCOF1Q13428 1488 aaKnown RBP34.26■■■■□ 3.07
ACTB-203ENST00000417101 DNMT1P26358 1616 aaKnown RBP34.22■■■■□ 3.07
ACTB-203ENST00000417101 ZNF335Q9H4Z2 1342 aaPredicted RBP34.19■■■■□ 3.06
ACTB-203ENST00000417101 RNF17Q9BXT8 1623 aaKnown RBP34.17■■■■□ 3.06
ACTB-203ENST00000417101 IQSEC2Q5JU85 1478 aa34.14■■■■□ 3.06
ACTB-203ENST00000417101 ABCC3O15438 1527 aa34.13■■■■□ 3.05
ACTB-203ENST00000417101 EIF2AK4Q9P2K8 1649 aaKnown RBP34.12■■■■□ 3.05
ACTB-203ENST00000417101 ABCC5O15440 1437 aa34.11■■■■□ 3.05
ACTB-203ENST00000417101 DUOX2Q9NRD8 1548 aa34.1■■■■□ 3.05
ACTB-203ENST00000417101 PTPN23Q9H3S7 1636 aa34.1■■■■□ 3.05
ACTB-203ENST00000417101 NLRP1Q9C000 1473 aa34.09■■■■□ 3.05
ACTB-203ENST00000417101 KIF15Q9NS87 1388 aa34.09■■■■□ 3.05
ACTB-203ENST00000417101 THEMISQ8N1K5 641 aaPredicted RBP34.07■■■■□ 3.04
ACTB-203ENST00000417101 MROH1Q8NDA8 1641 aa34.07■■■■□ 3.04
ACTB-203ENST00000417101 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
ACTB-203ENST00000417101 ZC3H13Q5T200 1668 aaKnown RBP34.06■■■■□ 3.04
ACTB-203ENST00000417101 FGD6Q6ZV73 1430 aa34.06■■■■□ 3.04
ACTB-203ENST00000417101 RRP7BPQ9NSQ0 103 aa34.06■■■■□ 3.04
ACTB-203ENST00000417101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.06■■■■□ 3.042e-35■■□□□ 12.8
ACTB-203ENST00000417101 UGGT1Q9NYU2 1555 aa34.03■■■■□ 3.04
ACTB-203ENST00000417101 ANKLE2Q86XL3 938 aa34.03■■■■□ 3.04
ACTB-203ENST00000417101 DAPK1P53355 1430 aa34.03■■■■□ 3.04
ACTB-203ENST00000417101 CROCC2H7BZ55 1655 aa34.02■■■■□ 3.04
ACTB-203ENST00000417101 NEURL4Q96JN8 1562 aa34.02■■■■□ 3.04
ACTB-203ENST00000417101 POLR1AO95602 1720 aaPredicted RBP34.01■■■■□ 3.04
ACTB-203ENST00000417101 SPATA31D1Q6ZQQ2 1576 aa34■■■■□ 3.03
ACTB-203ENST00000417101 ERVK-7P63135 1459 aa34■■■■□ 3.03
ACTB-203ENST00000417101 ERBINQ96RT1 1412 aa33.99■■■■□ 3.03
ACTB-203ENST00000417101 CEP152O94986 1710 aa33.97■■■■□ 3.03
ACTB-203ENST00000417101 UBAP1LF5GYI3 381 aa33.96■■■■□ 3.03
ACTB-203ENST00000417101 CHIC2Q9UKJ5 165 aa33.96■■■■□ 3.03
ACTB-203ENST00000417101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.94■■■■□ 3.02
ACTB-203ENST00000417101 PRDM15P57071 1507 aaPredicted RBP33.93■■■■□ 3.02
ACTB-203ENST00000417101 NPHP4O75161 1426 aaPredicted RBP33.9■■■■□ 3.02
ACTB-203ENST00000417101 ANKRD30AQ9BXX3 1397 aa33.9■■■■□ 3.02
ACTB-203ENST00000417101 CFAP65Q6ZU64 1925 aaKnown RBP33.89■■■■□ 3.02
ACTB-203ENST00000417101 MED14O60244 1454 aa33.88■■■■□ 3.01
ACTB-203ENST00000417101 DEPDC5O75140 1603 aa33.88■■■■□ 3.01
ACTB-203ENST00000417101 ARHGAP31Q2M1Z3 1444 aa33.87■■■■□ 3.01
ACTB-203ENST00000417101 KANK1Q14678 1352 aa33.85■■■■□ 3.01
ACTB-203ENST00000417101 CPS1P31327 1500 aa33.84■■■■□ 3.01
ACTB-203ENST00000417101 FAM50AQ14320 339 aaKnown RBP33.84■■■■□ 3.01
ACTB-203ENST00000417101 DISP3Q9P2K9 1392 aa33.84■■■■□ 3.01
ACTB-203ENST00000417101 VWDEQ8N2E2 1590 aa33.81■■■■□ 3
ACTB-203ENST00000417101 UBR1Q8IWV7 1749 aa33.79■■■■□ 3
ACTB-203ENST00000417101 IQGAP1P46940 1657 aa33.78■■■■□ 3
ACTB-203ENST00000417101 ADGRL2O95490 1459 aa33.76■■■□□ 2.99
ACTB-203ENST00000417101 LMTK2Q8IWU2 1503 aa33.73■■■□□ 2.99
ACTB-203ENST00000417101 SCAF11Q99590 1463 aaKnown RBP33.72■■■□□ 2.99
ACTB-203ENST00000417101 TOM1O60784 492 aa33.71■■■□□ 2.99
ACTB-203ENST00000417101 LTKP29376 864 aa33.71■■■□□ 2.99
ACTB-203ENST00000417101 SCAF1Q9H7N4 1312 aaKnown RBP33.71■■■□□ 2.99
ACTB-203ENST00000417101 TXNDC2Q86VQ3 553 aa33.7■■■□□ 2.99
ACTB-203ENST00000417101 ARHGAP23Q9P227 1491 aa33.69■■■□□ 2.98
ACTB-203ENST00000417101 PIP4K2BP78356 416 aa33.69■■■□□ 2.98
ACTB-203ENST00000417101 SLIT1O75093 1534 aa33.69■■■□□ 2.98
ACTB-203ENST00000417101 STAG3Q9UJ98 1225 aa33.67■■■□□ 2.98
ACTB-203ENST00000417101 PIK3C2BO00750 1634 aa33.66■■■□□ 2.98
ACTB-203ENST00000417101 EID1Q9Y6B2 187 aa33.66■■■□□ 2.98
ACTB-203ENST00000417101 ANKRD50Q9ULJ7 1429 aa33.65■■■□□ 2.98
ACTB-203ENST00000417101 IDI1Q13907 227 aa33.64■■■□□ 2.98
ACTB-203ENST00000417101 ILDR2Q71H61 639 aa33.64■■■□□ 2.98
ACTB-203ENST00000417101 EFCAB6Q5THR3 1501 aa33.63■■■□□ 2.97
ACTB-203ENST00000417101 TMEM2Q9UHN6 1383 aa33.61■■■□□ 2.97
ACTB-203ENST00000417101 STRCP1A6NGW2 1772 aa33.61■■■□□ 2.97
ACTB-203ENST00000417101 LRRC7Q96NW7 1537 aa33.59■■■□□ 2.97
ACTB-203ENST00000417101 NOS1P29475 1434 aa33.59■■■□□ 2.97
ACTB-203ENST00000417101 SYNMO15061 1565 aa33.59■■■□□ 2.97
ACTB-203ENST00000417101 HSPA1LP34931 641 aa33.58■■■□□ 2.97
ACTB-203ENST00000417101 KDM5AP29375 1690 aaKnown RBP33.52■■■□□ 2.96
ACTB-203ENST00000417101 SLC52A1Q9NWF4 448 aa33.52■■■□□ 2.96
ACTB-203ENST00000417101 ALKQ9UM73 1620 aa33.52■■■□□ 2.96
ACTB-203ENST00000417101 PPARGC1BQ86YN6 1023 aaKnown RBP33.5■■■□□ 2.95
ACTB-203ENST00000417101 RPRD2Q5VT52 1461 aaKnown RBP33.5■■■□□ 2.95
ACTB-203ENST00000417101 ADGRB3O60242 1522 aa33.48■■■□□ 2.95
ACTB-203ENST00000417101 ROCK1Q13464 1354 aa33.47■■■□□ 2.95
ACTB-203ENST00000417101 TET3O43151 1660 aa33.45■■■□□ 2.94
ACTB-203ENST00000417101 ITGAEP38570 1179 aa33.44■■■□□ 2.94
ACTB-203ENST00000417101 SLC26A8Q96RN1 970 aa33.43■■■□□ 2.94
ACTB-203ENST00000417101 UNC13BO14795 1591 aa33.43■■■□□ 2.94
ACTB-203ENST00000417101 SOCS7O14512 581 aa33.39■■■□□ 2.94
ACTB-203ENST00000417101 SENP3Q9H4L4 574 aaPredicted RBP33.38■■■□□ 2.93
ACTB-203ENST00000417101 BCANQ96GW7 911 aa33.37■■■□□ 2.93
ACTB-203ENST00000417101 GCC2Q8IWJ2 1684 aa33.36■■■□□ 2.93
ACTB-203ENST00000417101 KCNA6P17658 529 aa33.36■■■□□ 2.93
ACTB-203ENST00000417101 ZFYVE9O95405 1425 aa33.32■■■□□ 2.92
ACTB-203ENST00000417101 XIRP1Q702N8 1843 aaKnown RBP33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms