RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
RHBDF1-202ENST00000417043 MAP3K1Q13233 1512 aa24.62■■□□□ 1.53
RHBDF1-202ENST00000417043 KDM5DQ9BY66 1539 aa24.59■■□□□ 1.53
RHBDF1-202ENST00000417043 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
RHBDF1-202ENST00000417043 PKD2Q13563 968 aa24.58■■□□□ 1.53
RHBDF1-202ENST00000417043 ZNF335Q9H4Z2 1342 aaPredicted RBP24.58■■□□□ 1.52
RHBDF1-202ENST00000417043 A2ML1A8K2U0 1454 aa24.58■■□□□ 1.52
RHBDF1-202ENST00000417043 PLA2R1Q13018 1463 aa24.58■■□□□ 1.52
RHBDF1-202ENST00000417043 TNRQ92752 1358 aa24.57■■□□□ 1.52
RHBDF1-202ENST00000417043 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
RHBDF1-202ENST00000417043 PZPP20742 1482 aa24.56■■□□□ 1.52
RHBDF1-202ENST00000417043 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
RHBDF1-202ENST00000417043 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
RHBDF1-202ENST00000417043 MIA2Q96PC5 1412 aa24.55■■□□□ 1.52
RHBDF1-202ENST00000417043 APLP2Q06481 763 aa24.52■■□□□ 1.52
RHBDF1-202ENST00000417043 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
RHBDF1-202ENST00000417043 RNF17Q9BXT8 1623 aaKnown RBP24.49■■□□□ 1.51
RHBDF1-202ENST00000417043 CFAP65Q6ZU64 1925 aaKnown RBP24.48■■□□□ 1.51
RHBDF1-202ENST00000417043 ABCC3O15438 1527 aa24.46■■□□□ 1.51
RHBDF1-202ENST00000417043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
RHBDF1-202ENST00000417043 RRP7BPQ9NSQ0 103 aa24.45■■□□□ 1.5
RHBDF1-202ENST00000417043 PTPN23Q9H3S7 1636 aa24.45■■□□□ 1.5
RHBDF1-202ENST00000417043 IQSEC2Q5JU85 1478 aa24.45■■□□□ 1.5
RHBDF1-202ENST00000417043 ABCC5O15440 1437 aa24.44■■□□□ 1.5
RHBDF1-202ENST00000417043 MROH1Q8NDA8 1641 aa24.44■■□□□ 1.5
RHBDF1-202ENST00000417043 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
RHBDF1-202ENST00000417043 POLR1AO95602 1720 aaPredicted RBP24.43■■□□□ 1.5
RHBDF1-202ENST00000417043 NEURL4Q96JN8 1562 aa24.42■■□□□ 1.5
RHBDF1-202ENST00000417043 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
RHBDF1-202ENST00000417043 CEP152O94986 1710 aa24.42■■□□□ 1.5
RHBDF1-202ENST00000417043 THEMISQ8N1K5 641 aaPredicted RBP24.42■■□□□ 1.5
RHBDF1-202ENST00000417043 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
RHBDF1-202ENST00000417043 UGGT1Q9NYU2 1555 aa24.41■■□□□ 1.5
RHBDF1-202ENST00000417043 KIF15Q9NS87 1388 aa24.41■■□□□ 1.5
RHBDF1-202ENST00000417043 NLRP1Q9C000 1473 aa24.4■■□□□ 1.5
RHBDF1-202ENST00000417043 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
RHBDF1-202ENST00000417043 ZC3H13Q5T200 1668 aaKnown RBP24.4■■□□□ 1.5
RHBDF1-202ENST00000417043 UBAP1LF5GYI3 381 aa24.39■■□□□ 1.49
RHBDF1-202ENST00000417043 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.49
RHBDF1-202ENST00000417043 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
RHBDF1-202ENST00000417043 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
RHBDF1-202ENST00000417043 DAPK1P53355 1430 aa24.37■■□□□ 1.49
RHBDF1-202ENST00000417043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.37■■□□□ 1.49
RHBDF1-202ENST00000417043 ERVK-7P63135 1459 aa24.37■■□□□ 1.49
RHBDF1-202ENST00000417043 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
RHBDF1-202ENST00000417043 DISP3Q9P2K9 1392 aa24.33■■□□□ 1.49
RHBDF1-202ENST00000417043 NPHP4O75161 1426 aaPredicted RBP24.32■■□□□ 1.48
RHBDF1-202ENST00000417043 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
RHBDF1-202ENST00000417043 MED14O60244 1454 aa24.29■■□□□ 1.48
RHBDF1-202ENST00000417043 PRDM15P57071 1507 aaPredicted RBP24.29■■□□□ 1.48
RHBDF1-202ENST00000417043 DEPDC5O75140 1603 aa24.28■■□□□ 1.48
RHBDF1-202ENST00000417043 VWDEQ8N2E2 1590 aa24.28■■□□□ 1.48
RHBDF1-202ENST00000417043 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
RHBDF1-202ENST00000417043 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
RHBDF1-202ENST00000417043 FAM50AQ14320 339 aaKnown RBP24.26■■□□□ 1.47
RHBDF1-202ENST00000417043 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
RHBDF1-202ENST00000417043 IQGAP1P46940 1657 aa24.25■■□□□ 1.47
RHBDF1-202ENST00000417043 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
RHBDF1-202ENST00000417043 CPS1P31327 1500 aa24.25■■□□□ 1.47
RHBDF1-202ENST00000417043 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
RHBDF1-202ENST00000417043 PIP4K2BP78356 416 aa24.23■■□□□ 1.47
RHBDF1-202ENST00000417043 KANK1Q14678 1352 aa24.22■■□□□ 1.47
RHBDF1-202ENST00000417043 LTKP29376 864 aa24.22■■□□□ 1.47
RHBDF1-202ENST00000417043 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
RHBDF1-202ENST00000417043 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
RHBDF1-202ENST00000417043 TOM1O60784 492 aa24.18■■□□□ 1.46
RHBDF1-202ENST00000417043 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
RHBDF1-202ENST00000417043 SCAF11Q99590 1463 aaKnown RBP24.17■■□□□ 1.46
RHBDF1-202ENST00000417043 HSPA1LP34931 641 aa24.16■■□□□ 1.46
RHBDF1-202ENST00000417043 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
RHBDF1-202ENST00000417043 ARHGAP23Q9P227 1491 aa24.15■■□□□ 1.46
RHBDF1-202ENST00000417043 IDI1Q13907 227 aa24.15■■□□□ 1.46
RHBDF1-202ENST00000417043 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
RHBDF1-202ENST00000417043 SLIT1O75093 1534 aa24.14■■□□□ 1.45
RHBDF1-202ENST00000417043 LMTK2Q8IWU2 1503 aa24.14■■□□□ 1.45
RHBDF1-202ENST00000417043 EID1Q9Y6B2 187 aa24.12■■□□□ 1.45
RHBDF1-202ENST00000417043 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
RHBDF1-202ENST00000417043 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
RHBDF1-202ENST00000417043 SYNMO15061 1565 aa24.11■■□□□ 1.45
RHBDF1-202ENST00000417043 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
RHBDF1-202ENST00000417043 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
RHBDF1-202ENST00000417043 TMEM2Q9UHN6 1383 aa24.1■■□□□ 1.45
RHBDF1-202ENST00000417043 EFCAB6Q5THR3 1501 aa24.08■■□□□ 1.45
RHBDF1-202ENST00000417043 NOS1P29475 1434 aa24.08■■□□□ 1.44
RHBDF1-202ENST00000417043 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
RHBDF1-202ENST00000417043 ITGAEP38570 1179 aa24.02■■□□□ 1.44
RHBDF1-202ENST00000417043 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
RHBDF1-202ENST00000417043 SOCS7O14512 581 aa24.01■■□□□ 1.43
RHBDF1-202ENST00000417043 SLC26A8Q96RN1 970 aa24.01■■□□□ 1.43
RHBDF1-202ENST00000417043 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
RHBDF1-202ENST00000417043 XIRP1Q702N8 1843 aaKnown RBP24■■□□□ 1.43
RHBDF1-202ENST00000417043 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
RHBDF1-202ENST00000417043 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
RHBDF1-202ENST00000417043 TET3O43151 1660 aa23.97■■□□□ 1.43
RHBDF1-202ENST00000417043 RPRD2Q5VT52 1461 aaKnown RBP23.96■■□□□ 1.43
RHBDF1-202ENST00000417043 RBM33Q96EV2 1170 aaKnown RBP23.96■■□□□ 1.43
RHBDF1-202ENST00000417043 BCANQ96GW7 911 aa23.95■■□□□ 1.42
RHBDF1-202ENST00000417043 UNC13BO14795 1591 aa23.95■■□□□ 1.42
RHBDF1-202ENST00000417043 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
RHBDF1-202ENST00000417043 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms