RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 TSPY10P0CW01 314 aa13.2□□□□□ -0.3
ITGA6-205ENST00000416789 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
ITGA6-205ENST00000416789 CROCC2H7BZ55 1655 aa13.2□□□□□ -0.3
ITGA6-205ENST00000416789 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
ITGA6-205ENST00000416789 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
ITGA6-205ENST00000416789 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
ITGA6-205ENST00000416789 DNMT1P26358 1616 aaKnown RBP13.18□□□□□ -0.3
ITGA6-205ENST00000416789 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
ITGA6-205ENST00000416789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITGA6-205ENST00000416789 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
ITGA6-205ENST00000416789 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-205ENST00000416789 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
ITGA6-205ENST00000416789 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
ITGA6-205ENST00000416789 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
ITGA6-205ENST00000416789 A2MP01023 1474 aa13.15□□□□□ -0.3
ITGA6-205ENST00000416789 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
ITGA6-205ENST00000416789 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
ITGA6-205ENST00000416789 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
ITGA6-205ENST00000416789 DHX29Q7Z478 1369 aaKnown RBP13.12□□□□□ -0.31
ITGA6-205ENST00000416789 DAPK1P53355 1430 aa13.12□□□□□ -0.31
ITGA6-205ENST00000416789 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
ITGA6-205ENST00000416789 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
ITGA6-205ENST00000416789 MROH2AA6NES4 1674 aa13.11□□□□□ -0.31
ITGA6-205ENST00000416789 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
ITGA6-205ENST00000416789 DUOX2Q9NRD8 1548 aa13.1□□□□□ -0.31
ITGA6-205ENST00000416789 ABCC5O15440 1437 aa13.1□□□□□ -0.31
ITGA6-205ENST00000416789 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
ITGA6-205ENST00000416789 ADGRL2O95490 1459 aa13.09□□□□□ -0.31
ITGA6-205ENST00000416789 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
ITGA6-205ENST00000416789 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
ITGA6-205ENST00000416789 RNF17Q9BXT8 1623 aaKnown RBP13.06□□□□□ -0.32
ITGA6-205ENST00000416789 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
ITGA6-205ENST00000416789 ZC3H13Q5T200 1668 aaKnown RBP13.06□□□□□ -0.32
ITGA6-205ENST00000416789 PTPRMP28827 1452 aa13.06□□□□□ -0.32
ITGA6-205ENST00000416789 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
ITGA6-205ENST00000416789 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
ITGA6-205ENST00000416789 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
ITGA6-205ENST00000416789 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
ITGA6-205ENST00000416789 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
ITGA6-205ENST00000416789 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
ITGA6-205ENST00000416789 DEPDC5O75140 1603 aa13.02□□□□□ -0.33
ITGA6-205ENST00000416789 C3P01024 1663 aa13.02□□□□□ -0.33
ITGA6-205ENST00000416789 CLTCQ00610 1675 aaKnown RBP13.01□□□□□ -0.33
ITGA6-205ENST00000416789 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
ITGA6-205ENST00000416789 KIF3BO15066 747 aa13□□□□□ -0.33
ITGA6-205ENST00000416789 MLECQ14165 292 aa13□□□□□ -0.33
ITGA6-205ENST00000416789 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
ITGA6-205ENST00000416789 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
ITGA6-205ENST00000416789 NPATQ14207 1427 aa12.98□□□□□ -0.33
ITGA6-205ENST00000416789 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
ITGA6-205ENST00000416789 GGT6Q6P531 493 aa12.97□□□□□ -0.33
ITGA6-205ENST00000416789 KANK1Q14678 1352 aa12.96□□□□□ -0.33
ITGA6-205ENST00000416789 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
ITGA6-205ENST00000416789 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.34
ITGA6-205ENST00000416789 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
ITGA6-205ENST00000416789 ZMYM3Q14202 1370 aa12.95□□□□□ -0.34
ITGA6-205ENST00000416789 MROH1Q8NDA8 1641 aa12.95□□□□□ -0.34
ITGA6-205ENST00000416789 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
ITGA6-205ENST00000416789 WASHC2CQ9Y4E1 1318 aa12.94□□□□□ -0.34
ITGA6-205ENST00000416789 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
ITGA6-205ENST00000416789 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
ITGA6-205ENST00000416789 CEP152O94986 1710 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 ABCC3O15438 1527 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 LMTK2Q8IWU2 1503 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 PZPP20742 1482 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 CAMSAP1Q5T5Y3 1602 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 PTPRKQ15262 1439 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 UNC13BO14795 1591 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
ITGA6-205ENST00000416789 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
ITGA6-205ENST00000416789 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
ITGA6-205ENST00000416789 ARHGAP31Q2M1Z3 1444 aa12.92□□□□□ -0.34
ITGA6-205ENST00000416789 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
ITGA6-205ENST00000416789 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
ITGA6-205ENST00000416789 UHRF1BP1Q6BDS2 1440 aa12.9□□□□□ -0.34
ITGA6-205ENST00000416789 TET3O43151 1660 aa12.89□□□□□ -0.35
ITGA6-205ENST00000416789 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
ITGA6-205ENST00000416789 RPRD2Q5VT52 1461 aaKnown RBP12.89□□□□□ -0.35
ITGA6-205ENST00000416789 IQGAP3Q86VI3 1631 aa12.88□□□□□ -0.35
ITGA6-205ENST00000416789 SPATA31D1Q6ZQQ2 1576 aa12.88□□□□□ -0.35
ITGA6-205ENST00000416789 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
ITGA6-205ENST00000416789 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
ITGA6-205ENST00000416789 MYO3AQ8NEV4 1616 aa12.87□□□□□ -0.35
ITGA6-205ENST00000416789 NLRP1Q9C000 1473 aa12.86□□□□□ -0.35
ITGA6-205ENST00000416789 ITGAEP38570 1179 aa12.86□□□□□ -0.35
ITGA6-205ENST00000416789 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
ITGA6-205ENST00000416789 NAIPQ13075 1403 aa12.86□□□□□ -0.35
ITGA6-205ENST00000416789 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
ITGA6-205ENST00000416789 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
ITGA6-205ENST00000416789 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
ITGA6-205ENST00000416789 TNRQ92752 1358 aa12.83□□□□□ -0.36
ITGA6-205ENST00000416789 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
ITGA6-205ENST00000416789 A2ML1A8K2U0 1454 aa12.83□□□□□ -0.36
ITGA6-205ENST00000416789 ERVK-7P63135 1459 aa12.83□□□□□ -0.36
ITGA6-205ENST00000416789 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
ITGA6-205ENST00000416789 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
ITGA6-205ENST00000416789 NUP155O75694 1391 aa12.8□□□□□ -0.36
ITGA6-205ENST00000416789 E9PCH4 1651 aa12.8□□□□□ -0.36
ITGA6-205ENST00000416789 HRCP23327 699 aa12.79□□□□□ -0.36
ITGA6-205ENST00000416789 FKBP8Q14318 412 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms