RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 NCOA1Q15788 1441 aa27.85■■■□□ 2.05
CPNE1-210ENST00000416778 NCKAP5LQ9HCH0 1330 aa27.84■■■□□ 2.05
CPNE1-210ENST00000416778 RRP7BPQ9NSQ0 103 aa27.83■■■□□ 2.05
CPNE1-210ENST00000416778 FGD6Q6ZV73 1430 aa27.83■■■□□ 2.05
CPNE1-210ENST00000416778 CAMSAP1Q5T5Y3 1602 aa27.79■■■□□ 2.04
CPNE1-210ENST00000416778 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
CPNE1-210ENST00000416778 KDM5DQ9BY66 1539 aa27.78■■■□□ 2.04
CPNE1-210ENST00000416778 FAM135AQ9P2D6 1515 aa27.78■■■□□ 2.04
CPNE1-210ENST00000416778 TCOF1Q13428 1488 aaKnown RBP27.78■■■□□ 2.04
CPNE1-210ENST00000416778 PKD2Q13563 968 aa27.78■■■□□ 2.04
CPNE1-210ENST00000416778 PZPP20742 1482 aa27.77■■■□□ 2.04
CPNE1-210ENST00000416778 TNRQ92752 1358 aa27.77■■■□□ 2.04
CPNE1-210ENST00000416778 CHIC2Q9UKJ5 165 aa27.76■■■□□ 2.03
CPNE1-210ENST00000416778 DAPK1P53355 1430 aa27.75■■■□□ 2.03
CPNE1-210ENST00000416778 KIF15Q9NS87 1388 aa27.75■■■□□ 2.03
CPNE1-210ENST00000416778 DUOX2Q9NRD8 1548 aa27.74■■■□□ 2.03
CPNE1-210ENST00000416778 A2ML1A8K2U0 1454 aa27.73■■■□□ 2.03
CPNE1-210ENST00000416778 SHANK2Q9UPX8 1470 aa27.73■■■□□ 2.03
CPNE1-210ENST00000416778 CEP170BQ9Y4F5 1589 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-210ENST00000416778 MYO3AQ8NEV4 1616 aa27.72■■■□□ 2.03
CPNE1-210ENST00000416778 PLA2R1Q13018 1463 aa27.71■■■□□ 2.03
CPNE1-210ENST00000416778 RNF17Q9BXT8 1623 aaKnown RBP27.7■■■□□ 2.03
CPNE1-210ENST00000416778 FAM50AQ14320 339 aaKnown RBP27.69■■■□□ 2.02
CPNE1-210ENST00000416778 ABCC3O15438 1527 aa27.68■■■□□ 2.02
CPNE1-210ENST00000416778 THEMISQ8N1K5 641 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-210ENST00000416778 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
CPNE1-210ENST00000416778 EIF2AK4Q9P2K8 1649 aaKnown RBP27.67■■■□□ 2.02
CPNE1-210ENST00000416778 ANKRD30AQ9BXX3 1397 aa27.67■■■□□ 2.02
CPNE1-210ENST00000416778 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
CPNE1-210ENST00000416778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.66■■■□□ 2.023e-9■□□□□ 9.4
CPNE1-210ENST00000416778 ERBINQ96RT1 1412 aa27.66■■■□□ 2.02
CPNE1-210ENST00000416778 MROH1Q8NDA8 1641 aa27.64■■■□□ 2.02
CPNE1-210ENST00000416778 LTBP4Q8N2S1 1624 aa27.63■■■□□ 2.01
CPNE1-210ENST00000416778 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
CPNE1-210ENST00000416778 NLRP1Q9C000 1473 aa27.61■■■□□ 2.01
CPNE1-210ENST00000416778 ZNF335Q9H4Z2 1342 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-210ENST00000416778 CROCC2H7BZ55 1655 aa27.6■■■□□ 2.01
CPNE1-210ENST00000416778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.017e-10■■□□□ 13.2
CPNE1-210ENST00000416778 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
CPNE1-210ENST00000416778 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
CPNE1-210ENST00000416778 ERVK-7P63135 1459 aa27.57■■■□□ 2
CPNE1-210ENST00000416778 SPATA31D1Q6ZQQ2 1576 aa27.56■■■□□ 2
CPNE1-210ENST00000416778 ZC3H13Q5T200 1668 aaKnown RBP27.56■■■□□ 2
CPNE1-210ENST00000416778 ADGRL2O95490 1459 aa27.54■■■□□ 2
CPNE1-210ENST00000416778 KANK1Q14678 1352 aa27.54■■■□□ 2
CPNE1-210ENST00000416778 UGGT1Q9NYU2 1555 aa27.53■■■□□ 2
CPNE1-210ENST00000416778 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
CPNE1-210ENST00000416778 CEP152O94986 1710 aa27.49■■□□□ 1.99
CPNE1-210ENST00000416778 CFAP65Q6ZU64 1925 aaKnown RBP27.47■■□□□ 1.99
CPNE1-210ENST00000416778 DEPDC5O75140 1603 aa27.47■■□□□ 1.99
CPNE1-210ENST00000416778 IQSEC2Q5JU85 1478 aa27.46■■□□□ 1.99
CPNE1-210ENST00000416778 ANKRD50Q9ULJ7 1429 aa27.46■■□□□ 1.99
CPNE1-210ENST00000416778 NEURL4Q96JN8 1562 aa27.45■■□□□ 1.99
CPNE1-210ENST00000416778 MED14O60244 1454 aa27.44■■□□□ 1.98
CPNE1-210ENST00000416778 VWDEQ8N2E2 1590 aa27.44■■□□□ 1.98
CPNE1-210ENST00000416778 IDI1Q13907 227 aa27.44■■□□□ 1.98
CPNE1-210ENST00000416778 LMTK2Q8IWU2 1503 aa27.44■■□□□ 1.98
CPNE1-210ENST00000416778 NPHP4O75161 1426 aaPredicted RBP27.42■■□□□ 1.98
CPNE1-210ENST00000416778 LTKP29376 864 aa27.42■■□□□ 1.98
CPNE1-210ENST00000416778 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
CPNE1-210ENST00000416778 ROCK1Q13464 1354 aa27.39■■□□□ 1.98
CPNE1-210ENST00000416778 ITGAEP38570 1179 aa27.39■■□□□ 1.98
CPNE1-210ENST00000416778 UBAP1LF5GYI3 381 aa27.36■■□□□ 1.97
CPNE1-210ENST00000416778 POLR1AO95602 1720 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-210ENST00000416778 STAG3Q9UJ98 1225 aa27.35■■□□□ 1.97
CPNE1-210ENST00000416778 NOS1P29475 1434 aa27.34■■□□□ 1.97
CPNE1-210ENST00000416778 SLC52A1Q9NWF4 448 aa27.34■■□□□ 1.97
CPNE1-210ENST00000416778 ARHGAP23Q9P227 1491 aa27.33■■□□□ 1.97
CPNE1-210ENST00000416778 EID1Q9Y6B2 187 aa27.33■■□□□ 1.97
CPNE1-210ENST00000416778 UBR1Q8IWV7 1749 aa27.33■■□□□ 1.96
CPNE1-210ENST00000416778 TMEM2Q9UHN6 1383 aa27.31■■□□□ 1.96
CPNE1-210ENST00000416778 SLIT1O75093 1534 aa27.3■■□□□ 1.96
CPNE1-210ENST00000416778 SCAF11Q99590 1463 aaKnown RBP27.29■■□□□ 1.96
CPNE1-210ENST00000416778 EFCAB6Q5THR3 1501 aa27.28■■□□□ 1.96
CPNE1-210ENST00000416778 CPS1P31327 1500 aa27.27■■□□□ 1.96
CPNE1-210ENST00000416778 RPRD2Q5VT52 1461 aaKnown RBP27.25■■□□□ 1.95
CPNE1-210ENST00000416778 PIK3C2BO00750 1634 aa27.25■■□□□ 1.95
CPNE1-210ENST00000416778 SYNMO15061 1565 aa27.25■■□□□ 1.95
CPNE1-210ENST00000416778 IQGAP1P46940 1657 aa27.24■■□□□ 1.95
CPNE1-210ENST00000416778 NUP155O75694 1391 aa27.22■■□□□ 1.95
CPNE1-210ENST00000416778 TOM1O60784 492 aa27.22■■□□□ 1.95
CPNE1-210ENST00000416778 RRBP1Q9P2E9 1410 aaKnown RBP27.21■■□□□ 1.95
CPNE1-210ENST00000416778 UNC13BO14795 1591 aa27.18■■□□□ 1.94
CPNE1-210ENST00000416778 TET3O43151 1660 aa27.17■■□□□ 1.94
CPNE1-210ENST00000416778 KDM5AP29375 1690 aaKnown RBP27.16■■□□□ 1.94
CPNE1-210ENST00000416778 PIP4K2BP78356 416 aa27.15■■□□□ 1.94
CPNE1-210ENST00000416778 SLC26A8Q96RN1 970 aa27.15■■□□□ 1.94
CPNE1-210ENST00000416778 LRRC7Q96NW7 1537 aa27.15■■□□□ 1.94
CPNE1-210ENST00000416778 HDGFP51858 240 aaKnown RBP27.13■■□□□ 1.93
CPNE1-210ENST00000416778 STRCP1A6NGW2 1772 aa27.12■■□□□ 1.93
CPNE1-210ENST00000416778 KCNA6P17658 529 aa27.11■■□□□ 1.93
CPNE1-210ENST00000416778 ADGRB3O60242 1522 aa27.11■■□□□ 1.93
CPNE1-210ENST00000416778 CHGAP10645 457 aaKnown RBP27.1■■□□□ 1.93
CPNE1-210ENST00000416778 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
CPNE1-210ENST00000416778 IQGAP3Q86VI3 1631 aa27.08■■□□□ 1.93
CPNE1-210ENST00000416778 HSPA1LP34931 641 aa27.08■■□□□ 1.93
CPNE1-210ENST00000416778 GCC2Q8IWJ2 1684 aa27.08■■□□□ 1.92
CPNE1-210ENST00000416778 BCANQ96GW7 911 aa27.07■■□□□ 1.92
CPNE1-210ENST00000416778 E9PCH4 1651 aa27.07■■□□□ 1.92
CPNE1-210ENST00000416778 ZFYVE9O95405 1425 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms