RNA–Protein interactions for RNA: ENST00000416748.1

NUP35P2-201, Transcript of nucleoporin 35 pseudogene 2, humanhuman

BASIC

Gene NUP35P2, Length 943 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35P2-201ENST00000416748 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
NUP35P2-201ENST00000416748 PCDHGA10Q9Y5H3 936 aa10.88□□□□□ -0.67
NUP35P2-201ENST00000416748 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
NUP35P2-201ENST00000416748 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
NUP35P2-201ENST00000416748 NCKAP5LQ9HCH0 1330 aa10.86□□□□□ -0.67
NUP35P2-201ENST00000416748 ZNF775Q96BV0 537 aaPredicted RBP10.85□□□□□ -0.67
NUP35P2-201ENST00000416748 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
NUP35P2-201ENST00000416748 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
NUP35P2-201ENST00000416748 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
NUP35P2-201ENST00000416748 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.81□□□□□ -0.68
NUP35P2-201ENST00000416748 MAP3K9P80192 1104 aa10.79□□□□□ -0.68
NUP35P2-201ENST00000416748 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
NUP35P2-201ENST00000416748 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
NUP35P2-201ENST00000416748 FAM98CQ17RN3 349 aaKnown RBP10.78□□□□□ -0.68
NUP35P2-201ENST00000416748 ONECUT3O60422 494 aaPredicted RBP10.77□□□□□ -0.69
NUP35P2-201ENST00000416748 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
NUP35P2-201ENST00000416748 FBXW7Q969H0 707 aa10.77□□□□□ -0.69
NUP35P2-201ENST00000416748 PDE4AP27815 886 aa10.76□□□□□ -0.69
NUP35P2-201ENST00000416748 TJAP1Q5JTD0 557 aa10.76□□□□□ -0.69
NUP35P2-201ENST00000416748 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
NUP35P2-201ENST00000416748 PHF14O94880 888 aa10.75□□□□□ -0.69
NUP35P2-201ENST00000416748 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
NUP35P2-201ENST00000416748 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
NUP35P2-201ENST00000416748 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
NUP35P2-201ENST00000416748 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
NUP35P2-201ENST00000416748 DDX27Q96GQ7 796 aaKnown RBP10.72□□□□□ -0.69
NUP35P2-201ENST00000416748 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
NUP35P2-201ENST00000416748 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
NUP35P2-201ENST00000416748 MTRQ99707 1265 aa10.7□□□□□ -0.7
NUP35P2-201ENST00000416748 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
NUP35P2-201ENST00000416748 PPP4CP60510 307 aa10.68□□□□□ -0.7
NUP35P2-201ENST00000416748 MFSD10Q14728 455 aa10.66□□□□□ -0.7
NUP35P2-201ENST00000416748 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
NUP35P2-201ENST00000416748 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.66□□□□□ -0.7
NUP35P2-201ENST00000416748 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
NUP35P2-201ENST00000416748 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
NUP35P2-201ENST00000416748 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
NUP35P2-201ENST00000416748 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
NUP35P2-201ENST00000416748 EPAS1Q99814 870 aa10.62□□□□□ -0.71
NUP35P2-201ENST00000416748 RYDENQ9NUL5 291 aaKnown RBP10.62□□□□□ -0.71
NUP35P2-201ENST00000416748 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
NUP35P2-201ENST00000416748 POTECB2RU33 542 aa10.6□□□□□ -0.71
NUP35P2-201ENST00000416748 NKX2-3Q8TAU0 364 aa10.59□□□□□ -0.71
NUP35P2-201ENST00000416748 SMAPO00193 183 aa10.58□□□□□ -0.72
NUP35P2-201ENST00000416748 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
NUP35P2-201ENST00000416748 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
NUP35P2-201ENST00000416748 MYT1Q01538 1121 aa10.55□□□□□ -0.72
NUP35P2-201ENST00000416748 TSR1Q2NL82 804 aaKnown RBP10.54□□□□□ -0.72
NUP35P2-201ENST00000416748 APLP1P51693 650 aa10.53□□□□□ -0.72
NUP35P2-201ENST00000416748 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
NUP35P2-201ENST00000416748 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.73
NUP35P2-201ENST00000416748 DDX12PQ92771 950 aa10.52□□□□□ -0.73
NUP35P2-201ENST00000416748 DPYSL4O14531 572 aa10.51□□□□□ -0.73
NUP35P2-201ENST00000416748 PKDCCQ504Y2 493 aa10.51□□□□□ -0.73
NUP35P2-201ENST00000416748 FAM198AQ9UFP1 575 aa10.51□□□□□ -0.73
NUP35P2-201ENST00000416748 RNF40O75150 1001 aa10.49□□□□□ -0.73
NUP35P2-201ENST00000416748 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
NUP35P2-201ENST00000416748 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
NUP35P2-201ENST00000416748 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
NUP35P2-201ENST00000416748 GGCXP38435 758 aa10.48□□□□□ -0.73
NUP35P2-201ENST00000416748 EMID1Q96A84 441 aaPredicted RBP10.48□□□□□ -0.73
NUP35P2-201ENST00000416748 COPS2P61201 443 aa10.47□□□□□ -0.73
NUP35P2-201ENST00000416748 CDCA7LQ96GN5 454 aa10.47□□□□□ -0.73
NUP35P2-201ENST00000416748 MAP3K7O43318 606 aa10.46□□□□□ -0.73
NUP35P2-201ENST00000416748 DGAT1O75907 488 aa10.46□□□□□ -0.73
NUP35P2-201ENST00000416748 NBR1Q14596 966 aa10.46□□□□□ -0.73
NUP35P2-201ENST00000416748 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
NUP35P2-201ENST00000416748 CAMK2BQ13554 666 aa10.44□□□□□ -0.74
NUP35P2-201ENST00000416748 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
NUP35P2-201ENST00000416748 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
NUP35P2-201ENST00000416748 SLC19A1P41440 591 aa10.42□□□□□ -0.74
NUP35P2-201ENST00000416748 PRSS12P56730 875 aa10.42□□□□□ -0.74
NUP35P2-201ENST00000416748 TATDN2Q93075 761 aa10.42□□□□□ -0.74
NUP35P2-201ENST00000416748 NBPF26B4DH59 902 aa10.41□□□□□ -0.74
NUP35P2-201ENST00000416748 FAM187AA6NFU0 413 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 ST8SIA5O15466 376 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 PRR20EP86478 221 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 PRR20CP86479 221 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 PRR20DP86480 221 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 PRR20BP86481 221 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 PRR20AP86496 221 aa10.4□□□□□ -0.74
NUP35P2-201ENST00000416748 SPRYD7Q5W111 196 aa10.39□□□□□ -0.75
NUP35P2-201ENST00000416748 ZPR1O75312 459 aa10.38□□□□□ -0.75
NUP35P2-201ENST00000416748 ZNF598Q86UK7 904 aaKnown RBP10.37□□□□□ -0.75
NUP35P2-201ENST00000416748 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
NUP35P2-201ENST00000416748 TNFRSF10AO00220 468 aa10.35□□□□□ -0.75
NUP35P2-201ENST00000416748 NUDT18Q6ZVK8 323 aa10.35□□□□□ -0.75
NUP35P2-201ENST00000416748 AAASQ9NRG9 546 aa10.35□□□□□ -0.75
NUP35P2-201ENST00000416748 GDF9O60383 454 aa10.33□□□□□ -0.76
NUP35P2-201ENST00000416748 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
NUP35P2-201ENST00000416748 TLL1O43897 1013 aa10.32□□□□□ -0.76
NUP35P2-201ENST00000416748 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
NUP35P2-201ENST00000416748 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
NUP35P2-201ENST00000416748 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
NUP35P2-201ENST00000416748 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
NUP35P2-201ENST00000416748 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
NUP35P2-201ENST00000416748 CERKQ8TCT0 537 aa10.31□□□□□ -0.76
NUP35P2-201ENST00000416748 WFS1O76024 890 aa10.3□□□□□ -0.76
NUP35P2-201ENST00000416748 PDIA6Q15084 440 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms