RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 ARAP3Q8WWN8 1544 aa11.99□□□□□ -0.49
RBM39-209ENST00000416529 DIP2BQ9P265 1576 aa11.99□□□□□ -0.49
RBM39-209ENST00000416529 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
RBM39-209ENST00000416529 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
RBM39-209ENST00000416529 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
RBM39-209ENST00000416529 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
RBM39-209ENST00000416529 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
RBM39-209ENST00000416529 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
RBM39-209ENST00000416529 TEX14Q8IWB6 1497 aa11.96□□□□□ -0.49
RBM39-209ENST00000416529 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.49
RBM39-209ENST00000416529 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
RBM39-209ENST00000416529 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.49
RBM39-209ENST00000416529 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.5
RBM39-209ENST00000416529 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.5
RBM39-209ENST00000416529 KIF14Q15058 1648 aa11.95□□□□□ -0.5
RBM39-209ENST00000416529 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
RBM39-209ENST00000416529 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
RBM39-209ENST00000416529 LRRIQ1Q96JM4 1722 aa11.93□□□□□ -0.5
RBM39-209ENST00000416529 LRRC9Q6ZRR7 1453 aa11.93□□□□□ -0.5
RBM39-209ENST00000416529 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
RBM39-209ENST00000416529 IRX5P78411 483 aaPredicted RBP11.92□□□□□ -0.5
RBM39-209ENST00000416529 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
RBM39-209ENST00000416529 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
RBM39-209ENST00000416529 CD109Q6YHK3 1445 aa11.92□□□□□ -0.5
RBM39-209ENST00000416529 PSEN1P49768 467 aa11.91□□□□□ -0.5
RBM39-209ENST00000416529 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
RBM39-209ENST00000416529 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
RBM39-209ENST00000416529 NEO1Q92859 1461 aa11.9□□□□□ -0.5
RBM39-209ENST00000416529 PLCH2O75038 1416 aa11.9□□□□□ -0.5
RBM39-209ENST00000416529 CFAP74Q9C0B2 1584 aa11.9□□□□□ -0.5
RBM39-209ENST00000416529 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
RBM39-209ENST00000416529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
RBM39-209ENST00000416529 RSPH4AQ5TD94 716 aa11.88□□□□□ -0.51
RBM39-209ENST00000416529 EFCAB2Q5VUJ9 269 aa11.88□□□□□ -0.51
RBM39-209ENST00000416529 KCNH8Q96L42 1107 aa11.88□□□□□ -0.51
RBM39-209ENST00000416529 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
RBM39-209ENST00000416529 MIA2Q96PC5 1412 aa11.87□□□□□ -0.51
RBM39-209ENST00000416529 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
RBM39-209ENST00000416529 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
RBM39-209ENST00000416529 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
RBM39-209ENST00000416529 NCOA2Q15596 1464 aa11.85□□□□□ -0.51
RBM39-209ENST00000416529 KIAA1107Q9UPP5 1409 aa11.85□□□□□ -0.51
RBM39-209ENST00000416529 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
RBM39-209ENST00000416529 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
RBM39-209ENST00000416529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.83□□□□□ -0.52
RBM39-209ENST00000416529 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
RBM39-209ENST00000416529 FANCAO15360 1455 aa11.82□□□□□ -0.52
RBM39-209ENST00000416529 TTC37Q6PGP7 1564 aa11.81□□□□□ -0.52
RBM39-209ENST00000416529 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
RBM39-209ENST00000416529 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
RBM39-209ENST00000416529 L3MBTL3Q96JM7 780 aaPredicted RBP11.8□□□□□ -0.52
RBM39-209ENST00000416529 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
RBM39-209ENST00000416529 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
RBM39-209ENST00000416529 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
RBM39-209ENST00000416529 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
RBM39-209ENST00000416529 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
RBM39-209ENST00000416529 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
RBM39-209ENST00000416529 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
RBM39-209ENST00000416529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
RBM39-209ENST00000416529 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
RBM39-209ENST00000416529 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.52
RBM39-209ENST00000416529 POTEMA6NI47 508 aa11.77□□□□□ -0.53
RBM39-209ENST00000416529 DENND4BO75064 1496 aaPredicted RBP11.76□□□□□ -0.53
RBM39-209ENST00000416529 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
RBM39-209ENST00000416529 ZNF518AQ6AHZ1 1483 aa11.76□□□□□ -0.53
RBM39-209ENST00000416529 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
RBM39-209ENST00000416529 PDCD7Q8N8D1 485 aaKnown RBP11.75□□□□□ -0.53
RBM39-209ENST00000416529 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
RBM39-209ENST00000416529 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
RBM39-209ENST00000416529 TAOK2Q9UL54 1235 aa11.75□□□□□ -0.53
RBM39-209ENST00000416529 FGD6Q6ZV73 1430 aa11.75□□□□□ -0.53
RBM39-209ENST00000416529 PCDH10Q9P2E7 1040 aa11.74□□□□□ -0.53
RBM39-209ENST00000416529 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
RBM39-209ENST00000416529 ABCC1P33527 1531 aa11.74□□□□□ -0.53
RBM39-209ENST00000416529 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
RBM39-209ENST00000416529 RTEL1-TNFRSF6BF6WH68 1400 aa11.73□□□□□ -0.53
RBM39-209ENST00000416529 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
RBM39-209ENST00000416529 ZMYM4Q5VZL5 1548 aa11.73□□□□□ -0.53
RBM39-209ENST00000416529 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
RBM39-209ENST00000416529 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
RBM39-209ENST00000416529 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
RBM39-209ENST00000416529 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
RBM39-209ENST00000416529 POGZQ7Z3K3 1410 aa11.72□□□□□ -0.53
RBM39-209ENST00000416529 RRBP1Q9P2E9 1410 aaKnown RBP11.72□□□□□ -0.53
RBM39-209ENST00000416529 G3V3G9 751 aa11.72□□□□□ -0.53
RBM39-209ENST00000416529 SNPHO15079 494 aa11.72□□□□□ -0.53
RBM39-209ENST00000416529 MLH3Q9UHC1 1453 aa11.71□□□□□ -0.53
RBM39-209ENST00000416529 KDM5CP41229 1560 aa11.71□□□□□ -0.54
RBM39-209ENST00000416529 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 CAMSAP2Q08AD1 1489 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 CCDC141Q6ZP82 1450 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
RBM39-209ENST00000416529 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
RBM39-209ENST00000416529 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
RBM39-209ENST00000416529 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
RBM39-209ENST00000416529 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
RBM39-209ENST00000416529 ZNF777Q9ULD5 760 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms